RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 SLC4A2P04920 1241 aa31.2■■■□□ 2.58
CTF1-202ENST00000395019 UBR2Q8IWV8 1755 aa31.2■■■□□ 2.58
CTF1-202ENST00000395019 ITPRIPQ8IWB1 547 aa31.19■■■□□ 2.58
CTF1-202ENST00000395019 KDM2BQ8NHM5 1336 aa31.18■■■□□ 2.58
CTF1-202ENST00000395019 SLC39A6Q13433 755 aa31.18■■■□□ 2.58
CTF1-202ENST00000395019 ILDR2Q71H61 639 aa31.18■■■□□ 2.58
CTF1-202ENST00000395019 STK31Q9BXU1 1019 aa31.18■■■□□ 2.58
CTF1-202ENST00000395019 CHMP4AQ9BY43 222 aa31.18■■■□□ 2.58
CTF1-202ENST00000395019 HEG1Q9ULI3 1381 aa31.17■■■□□ 2.58
CTF1-202ENST00000395019 CENPQQ7L2Z9 268 aaPredicted RBP31.16■■■□□ 2.58
CTF1-202ENST00000395019 ASAP1Q9ULH1 1129 aa31.16■■■□□ 2.58
CTF1-202ENST00000395019 HDGFL1Q5TGJ6 251 aa31.13■■■□□ 2.57
CTF1-202ENST00000395019 BCL11BQ9C0K0 894 aaPredicted RBP31.13■■■□□ 2.57
CTF1-202ENST00000395019 ATG3Q9NT62 314 aa31.13■■■□□ 2.57
CTF1-202ENST00000395019 KCPQ6ZWJ8 1503 aa31.13■■■□□ 2.57
CTF1-202ENST00000395019 ZNF790Q6PG37 636 aa31.12■■■□□ 2.57
CTF1-202ENST00000395019 CACNA1FO60840 1977 aa31.11■■■□□ 2.57
CTF1-202ENST00000395019 CHMP4BQ9H444 224 aaKnown RBP31.11■■■□□ 2.57
CTF1-202ENST00000395019 LY75O60449 1722 aa31.1■■■□□ 2.57
CTF1-202ENST00000395019 GIGYF1O75420 1035 aaPredicted RBP31.09■■■□□ 2.57
CTF1-202ENST00000395019 G2E3Q7L622 706 aa31.09■■■□□ 2.57
CTF1-202ENST00000395019 ZBTB40Q9NUA8 1239 aa31.09■■■□□ 2.57
CTF1-202ENST00000395019 PCDHB15Q9Y5E8 787 aa31.09■■■□□ 2.57
CTF1-202ENST00000395019 C5P01031 1676 aa31.09■■■□□ 2.57
CTF1-202ENST00000395019 INTS3Q68E01 1043 aaKnown RBP31.08■■■□□ 2.57
CTF1-202ENST00000395019 NECTIN2Q92692 538 aa31.08■■■□□ 2.57
CTF1-202ENST00000395019 ZBTB7BO15156 539 aaPredicted RBP31.06■■■□□ 2.56
CTF1-202ENST00000395019 IGHDP01880 384 aa31.06■■■□□ 2.56
CTF1-202ENST00000395019 EIF2S2P20042 333 aaKnown RBP31.06■■■□□ 2.56
CTF1-202ENST00000395019 FLIIQ13045 1269 aa31.06■■■□□ 2.56
CTF1-202ENST00000395019 PALLDQ8WX93 1383 aa31.04■■■□□ 2.56
CTF1-202ENST00000395019 PTCD1O75127 700 aaKnown RBP31.04■■■□□ 2.56
CTF1-202ENST00000395019 ZNF496Q96IT1 587 aaPredicted RBP31.04■■■□□ 2.56
CTF1-202ENST00000395019 TJP1Q07157 1748 aa31.04■■■□□ 2.56
CTF1-202ENST00000395019 TTC5Q8N0Z6 440 aa31.02■■■□□ 2.56
CTF1-202ENST00000395019 SLC4A9Q96Q91 983 aa31.02■■■□□ 2.56
CTF1-202ENST00000395019 PRAMEF22A3QJZ6 481 aa31.01■■■□□ 2.55
CTF1-202ENST00000395019 APBA3O96018 575 aa31■■■□□ 2.55
CTF1-202ENST00000395019 RWDD1Q9H446 243 aaPredicted RBP31■■■□□ 2.55
CTF1-202ENST00000395019 CHPF2Q9P2E5 772 aa31■■■□□ 2.55
CTF1-202ENST00000395019 KCNQ4P56696 695 aa30.99■■■□□ 2.55
CTF1-202ENST00000395019 FKBP5Q13451 457 aaPredicted RBP30.99■■■□□ 2.55
CTF1-202ENST00000395019 RBM42Q9BTD8 480 aaKnown RBP30.99■■■□□ 2.55
CTF1-202ENST00000395019 DBF4Q9UBU7 674 aaPredicted RBP30.99■■■□□ 2.55
CTF1-202ENST00000395019 TAF1LQ8IZX4 1826 aa30.99■■■□□ 2.55
CTF1-202ENST00000395019 FMNL2Q96PY5 1086 aa30.98■■■□□ 2.55
CTF1-202ENST00000395019 LAMB4A4D0S4 1761 aa30.98■■■□□ 2.55
CTF1-202ENST00000395019 RGPD3A6NKT7 1758 aaPredicted RBP30.98■■■□□ 2.55
CTF1-202ENST00000395019 RGPD4Q7Z3J3 1758 aa30.98■■■□□ 2.55
CTF1-202ENST00000395019 CCT4P50991 539 aaKnown RBP30.97■■■□□ 2.55
CTF1-202ENST00000395019 SMARCC1Q92922 1105 aaPredicted RBP30.97■■■□□ 2.55
CTF1-202ENST00000395019 ZNF831Q5JPB2 1677 aa30.97■■■□□ 2.55
CTF1-202ENST00000395019 CICQ96RK0 1608 aaPredicted RBP30.97■■■□□ 2.55
CTF1-202ENST00000395019 COL5A3P25940 1745 aaPredicted RBP30.96■■■□□ 2.55
CTF1-202ENST00000395019 HDAC1Q13547 482 aaPredicted RBP30.96■■■□□ 2.55
CTF1-202ENST00000395019 PHAXQ9H814 394 aaKnown RBP30.96■■■□□ 2.55
CTF1-202ENST00000395019 F6X3S4 739 aa30.95■■■□□ 2.55
CTF1-202ENST00000395019 SNRPA1P09661 255 aaKnown RBP30.95■■■□□ 2.55
CTF1-202ENST00000395019 LOC102724428A0A0B4J2F2 783 aa30.95■■■□□ 2.54
CTF1-202ENST00000395019 SIK1P57059 783 aa30.95■■■□□ 2.54
CTF1-202ENST00000395019 PXDNLA1KZ92 1463 aa30.93■■■□□ 2.54
CTF1-202ENST00000395019 PROM2Q8N271 834 aa30.93■■■□□ 2.54
CTF1-202ENST00000395019 UPF1Q92900 1129 aaKnown RBP eCLIP30.92■■■□□ 2.54
CTF1-202ENST00000395019 ITPK1Q13572 414 aa30.91■■■□□ 2.54
CTF1-202ENST00000395019 SLC4A10Q6U841 1118 aa30.91■■■□□ 2.54
CTF1-202ENST00000395019 DEFB132Q7Z7B7 95 aa30.91■■■□□ 2.54
CTF1-202ENST00000395019 DDX21Q9NR30 783 aaKnown RBP eCLIP30.91■■■□□ 2.54
CTF1-202ENST00000395019 PLSCR1O15162 318 aa30.91■■■□□ 2.54
CTF1-202ENST00000395019 EN1Q05925 392 aaPredicted RBP30.91■■■□□ 2.54
CTF1-202ENST00000395019 TSHZ2Q9NRE2 1034 aa30.91■■■□□ 2.54
CTF1-202ENST00000395019 LRRC4BQ9NT99 713 aa30.91■■■□□ 2.54
CTF1-202ENST00000395019 HYPKQ9NX55 129 aa30.91■■■□□ 2.54
CTF1-202ENST00000395019 MYH14Q7Z406 1995 aaKnown RBP30.9■■■□□ 2.54
CTF1-202ENST00000395019 DNAJC10Q8IXB1 793 aa30.9■■■□□ 2.54
CTF1-202ENST00000395019 RREB1Q92766 1687 aa30.9■■■□□ 2.54
CTF1-202ENST00000395019 ATP6V1AP38606 617 aa30.89■■■□□ 2.54
CTF1-202ENST00000395019 USP16Q9Y5T5 823 aa30.89■■■□□ 2.54
CTF1-202ENST00000395019 ANXA1P04083 346 aa30.88■■■□□ 2.53
CTF1-202ENST00000395019 PDIA6Q15084 440 aa30.88■■■□□ 2.53
CTF1-202ENST00000395019 CCNL1Q9UK58 526 aaPredicted RBP30.88■■■□□ 2.53
CTF1-202ENST00000395019 N4BP2Q86UW6 1770 aaPredicted RBP30.88■■■□□ 2.53
CTF1-202ENST00000395019 EZH2Q15910 746 aaKnown RBP30.87■■■□□ 2.53
CTF1-202ENST00000395019 PROSER3Q2NL68 480 aa30.87■■■□□ 2.53
CTF1-202ENST00000395019 TXNRD1Q16881 649 aa30.87■■■□□ 2.53
CTF1-202ENST00000395019 VSIG10Q8N0Z9 540 aa30.87■■■□□ 2.53
CTF1-202ENST00000395019 CAMKK2Q96RR4 588 aa30.87■■■□□ 2.53
CTF1-202ENST00000395019 SF3B2Q13435 895 aaKnown RBP30.86■■■□□ 2.53
CTF1-202ENST00000395019 C1orf115Q9H7X2 142 aa30.86■■■□□ 2.53
CTF1-202ENST00000395019 NUP188Q5SRE5 1749 aa30.86■■■□□ 2.53
CTF1-202ENST00000395019 LINC00116Q8NCU8 138 aa30.85■■■□□ 2.53
CTF1-202ENST00000395019 MEIS3Q99687 375 aa30.84■■■□□ 2.53
CTF1-202ENST00000395019 C4BP0C0L5 1744 aa30.84■■■□□ 2.53
CTF1-202ENST00000395019 DNAAF4Q8WXU2 420 aa30.84■■■□□ 2.53
CTF1-202ENST00000395019 SKAP1Q86WV1 359 aa30.83■■■□□ 2.53
CTF1-202ENST00000395019 CCDC125Q86Z20 511 aa30.83■■■□□ 2.53
CTF1-202ENST00000395019 PI4KAP2A4QPH2 592 aa30.82■■■□□ 2.52
CTF1-202ENST00000395019 BAG6P46379 1132 aa30.82■■■□□ 2.52
CTF1-202ENST00000395019 PI4KAP1Q8N8J0 262 aa30.82■■■□□ 2.52
CTF1-202ENST00000395019 ADCY9O60503 1353 aa30.82■■■□□ 2.52
CTF1-202ENST00000395019 CYP19A1P11511 503 aaPredicted RBP30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms