RNA–Protein interactions for RNA: ENST00000393572.5

FAM3A-205, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-205ENST00000393572 YBX3P16989 372 aaKnown RBP eCLIP23.2■■□□□ 1.36e-6■□□□□ 10.6
FAM3A-205ENST00000393572 NPM2Q86SE8 214 aaKnown RBP23.2■■□□□ 1.3
FAM3A-205ENST00000393572 NARFQ9UHQ1 456 aa23.2■■□□□ 1.3
FAM3A-205ENST00000393572 ZBTB1Q9Y2K1 713 aa23.2■■□□□ 1.3
FAM3A-205ENST00000393572 GOLGB1Q14789 3259 aaKnown RBP23.2■■□□□ 1.3
FAM3A-205ENST00000393572 SRP68Q9UHB9 627 aaKnown RBP23.19■■□□□ 1.3
FAM3A-205ENST00000393572 C10orf71Q711Q0 1435 aa23.18■■□□□ 1.3
FAM3A-205ENST00000393572 MAPK8IP3Q9UPT6 1336 aa23.18■■□□□ 1.3
FAM3A-205ENST00000393572 KIF13BQ9NQT8 1826 aa23.18■■□□□ 1.3
FAM3A-205ENST00000393572 FKBP8Q14318 412 aa23.18■■□□□ 1.3
FAM3A-205ENST00000393572 MYBBP1AQ9BQG0 1328 aaKnown RBP23.17■■□□□ 1.3
FAM3A-205ENST00000393572 MCM10Q7L590 875 aa23.17■■□□□ 1.3
FAM3A-205ENST00000393572 CANXP27824 592 aaKnown RBP23.16■■□□□ 1.3
FAM3A-205ENST00000393572 EIF5P55010 431 aaKnown RBP23.16■■□□□ 1.3
FAM3A-205ENST00000393572 USPL1Q5W0Q7 1092 aa23.16■■□□□ 1.3
FAM3A-205ENST00000393572 ZNF784Q8NCA9 323 aaPredicted RBP23.16■■□□□ 1.3
FAM3A-205ENST00000393572 PNISRQ8TF01 805 aaKnown RBP23.16■■□□□ 1.3
FAM3A-205ENST00000393572 PLEKHF1Q96S99 279 aa23.16■■□□□ 1.3
FAM3A-205ENST00000393572 TM4SF1P30408 202 aa23.15■■□□□ 1.3
FAM3A-205ENST00000393572 IL6STP40189 918 aaPredicted RBP23.15■■□□□ 1.3
FAM3A-205ENST00000393572 TAF7Q15545 349 aaPredicted RBP23.15■■□□□ 1.3
FAM3A-205ENST00000393572 NFE2L2Q16236 605 aa23.14■■□□□ 1.29
FAM3A-205ENST00000393572 PXDNLA1KZ92 1463 aa23.13■■□□□ 1.29
FAM3A-205ENST00000393572 SNRPA1P09661 255 aaKnown RBP23.13■■□□□ 1.29
FAM3A-205ENST00000393572 POLRMTO00411 1230 aaKnown RBP23.12■■□□□ 1.29
FAM3A-205ENST00000393572 DDR1Q08345 913 aa23.11■■□□□ 1.29
FAM3A-205ENST00000393572 DCTN1Q14203 1278 aa23.1■■□□□ 1.29
FAM3A-205ENST00000393572 KCNQ3O43525 872 aa23.09■■□□□ 1.29
FAM3A-205ENST00000393572 LMOD3Q0VAK6 560 aa23.09■■□□□ 1.29
FAM3A-205ENST00000393572 NFIXQ14938 502 aa23.09■■□□□ 1.29
FAM3A-205ENST00000393572 A0A0G2JLW4 131 aa23.08■■□□□ 1.29
FAM3A-205ENST00000393572 DPEP1P16444 411 aa23.08■■□□□ 1.29
FAM3A-205ENST00000393572 BCL2L12Q9HB09 334 aa23.07■■□□□ 1.28
FAM3A-205ENST00000393572 PIM2Q9P1W9 311 aa23.07■■□□□ 1.28
FAM3A-205ENST00000393572 ZNF330Q9Y3S2 320 aaPredicted RBP23.07■■□□□ 1.28
FAM3A-205ENST00000393572 DLG5Q8TDM6 1919 aa23.06■■□□□ 1.28
FAM3A-205ENST00000393572 A1BGP04217 495 aa23.06■■□□□ 1.28
FAM3A-205ENST00000393572 BCS1LQ9Y276 419 aa23.06■■□□□ 1.28
FAM3A-205ENST00000393572 USP16Q9Y5T5 823 aa23.06■■□□□ 1.28
FAM3A-205ENST00000393572 KIAA1551Q9HCM1 1747 aa23.05■■□□□ 1.28
FAM3A-205ENST00000393572 RGL2O15211 777 aa23.05■■□□□ 1.28
FAM3A-205ENST00000393572 SERPINB2P05120 415 aa23.05■■□□□ 1.28
FAM3A-205ENST00000393572 WDR43Q15061 677 aaKnown RBP eCLIP23.05■■□□□ 1.28
FAM3A-205ENST00000393572 PDZRN3Q9UPQ7 1066 aa23.05■■□□□ 1.28
FAM3A-205ENST00000393572 N4BP2Q86UW6 1770 aaPredicted RBP23.04■■□□□ 1.28
FAM3A-205ENST00000393572 BABAM1Q9NWV8 329 aa23.04■■□□□ 1.28
FAM3A-205ENST00000393572 RIPK4P57078 832 aa23.03■■□□□ 1.28
FAM3A-205ENST00000393572 DALRD3Q5D0E6 543 aaKnown RBP23.03■■□□□ 1.28
FAM3A-205ENST00000393572 CLEC4GQ6UXB4 293 aa23.03■■□□□ 1.28
FAM3A-205ENST00000393572 PRKRIP1Q9H875 184 aaPredicted RBP23.03■■□□□ 1.28
FAM3A-205ENST00000393572 WWC3Q9ULE0 1092 aa23.03■■□□□ 1.28
FAM3A-205ENST00000393572 TBC1D2BQ9UPU7 963 aa23.03■■□□□ 1.28
FAM3A-205ENST00000393572 ZNF652Q9Y2D9 606 aa23.03■■□□□ 1.28
FAM3A-205ENST00000393572 DZIP3Q86Y13 1208 aaKnown RBP23.02■■□□□ 1.28
FAM3A-205ENST00000393572 NRXN2Q9P2S2 1712 aa23.02■■□□□ 1.28
FAM3A-205ENST00000393572 CARMIL3Q8ND23 1372 aa23.01■■□□□ 1.27
FAM3A-205ENST00000393572 SCN7AQ01118 1682 aa23.01■■□□□ 1.27
FAM3A-205ENST00000393572 KCNA3P22001 575 aa23.01■■□□□ 1.27
FAM3A-205ENST00000393572 SETDB2Q96T68 719 aa23.01■■□□□ 1.27
FAM3A-205ENST00000393572 BRCA1P38398 1863 aaKnown RBP23■■□□□ 1.27
FAM3A-205ENST00000393572 CAMTA2O94983 1202 aa23■■□□□ 1.27
FAM3A-205ENST00000393572 TMPOP42166 694 aaKnown RBP23■■□□□ 1.27
FAM3A-205ENST00000393572 AFDNP55196 1824 aaKnown RBP22.99■■□□□ 1.27
FAM3A-205ENST00000393572 TBC1D9BQ66K14 1250 aa22.99■■□□□ 1.27
FAM3A-205ENST00000393572 BICDL1Q6ZP65 573 aa22.99■■□□□ 1.27
FAM3A-205ENST00000393572 RUNDC1Q96C34 613 aa22.99■■□□□ 1.27
FAM3A-205ENST00000393572 MIS18AQ9NYP9 233 aa22.99■■□□□ 1.27
FAM3A-205ENST00000393572 KDM3BQ7LBC6 1761 aa22.99■■□□□ 1.27
FAM3A-205ENST00000393572 PRAMEF22A3QJZ6 481 aa22.98■■□□□ 1.27
FAM3A-205ENST00000393572 GIGYF1O75420 1035 aaPredicted RBP22.98■■□□□ 1.27
FAM3A-205ENST00000393572 EIF4A1P60842 406 aaKnown RBP22.98■■□□□ 1.27
FAM3A-205ENST00000393572 ARHGAP27Q6ZUM4 889 aa22.98■■□□□ 1.27
FAM3A-205ENST00000393572 ARFGEF1Q9Y6D6 1849 aa22.98■■□□□ 1.27
FAM3A-205ENST00000393572 ADCY9O60503 1353 aa22.98■■□□□ 1.27
FAM3A-205ENST00000393572 H0YIN7 160 aa22.97■■□□□ 1.27
FAM3A-205ENST00000393572 NPHP1O15259 732 aa22.97■■□□□ 1.27
FAM3A-205ENST00000393572 PDE6BP35913 854 aa22.97■■□□□ 1.27
FAM3A-205ENST00000393572 TSPYL4Q9UJ04 414 aa22.97■■□□□ 1.27
FAM3A-205ENST00000393572 BRIP1Q9BX63 1249 aa22.96■■□□□ 1.27
FAM3A-205ENST00000393572 ATP10DQ9P241 1426 aa22.96■■□□□ 1.27
FAM3A-205ENST00000393572 LAMB4A4D0S4 1761 aa22.96■■□□□ 1.27
FAM3A-205ENST00000393572 CHRNA5P30532 468 aa22.95■■□□□ 1.26
FAM3A-205ENST00000393572 ST5P78524 1137 aa22.95■■□□□ 1.26
FAM3A-205ENST00000393572 ERBB4Q15303 1308 aa22.95■■□□□ 1.26
FAM3A-205ENST00000393572 THUMPD2Q9BTF0 503 aaKnown RBP22.95■■□□□ 1.26
FAM3A-205ENST00000393572 BCORQ6W2J9 1755 aa22.94■■□□□ 1.26
FAM3A-205ENST00000393572 NBPF26B4DH59 902 aa22.94■■□□□ 1.26
FAM3A-205ENST00000393572 NBPF10Q6P3W6 841 aaKnown RBP22.94■■□□□ 1.26
FAM3A-205ENST00000393572 NBPF15Q8N660 670 aa22.94■■□□□ 1.26
FAM3A-205ENST00000393572 CNBD1Q8NA66 436 aa22.94■■□□□ 1.26
FAM3A-205ENST00000393572 GPBP1L1Q9HC44 474 aaPredicted RBP22.94■■□□□ 1.26
FAM3A-205ENST00000393572 C2CD5Q86YS7 1000 aa22.93■■□□□ 1.26
FAM3A-205ENST00000393572 TTLL6Q8N841 843 aa22.93■■□□□ 1.26
FAM3A-205ENST00000393572 PIP4K2AP48426 406 aaPredicted RBP22.92■■□□□ 1.26
FAM3A-205ENST00000393572 PRR5LQ6MZQ0 368 aa22.92■■□□□ 1.26
FAM3A-205ENST00000393572 ADAMTS8Q9UP79 889 aa22.92■■□□□ 1.26
FAM3A-205ENST00000393572 ERVV-1B6SEH8 477 aa22.91■■□□□ 1.26
FAM3A-205ENST00000393572 CCDC146Q8IYE0 955 aa22.91■■□□□ 1.26
FAM3A-205ENST00000393572 C1QTNF8P60827 252 aa22.9■■□□□ 1.26
FAM3A-205ENST00000393572 TPTE2Q6XPS3 522 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms