RNA–Protein interactions for RNA: ENST00000391089.1

SNORA48.4-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 134 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.4-201ENST00000391089 TEX13AQ9BXU3 409 aaPredicted RBP6.52□□□□□ -1.37
SNORA48.4-201ENST00000391089 USP26Q9BXU7 913 aa6.52□□□□□ -1.37
SNORA48.4-201ENST00000391089 USP44Q9H0E7 712 aa6.52□□□□□ -1.37
SNORA48.4-201ENST00000391089 TNNQ9UQP3 1299 aa6.52□□□□□ -1.37
SNORA48.4-201ENST00000391089 RFX7Q2KHR2 1363 aa6.52□□□□□ -1.37
SNORA48.4-201ENST00000391089 RAD50Q92878 1312 aa6.51□□□□□ -1.37
SNORA48.4-201ENST00000391089 ERVV-2B6SEH9 535 aa6.51□□□□□ -1.37
SNORA48.4-201ENST00000391089 GLRX3O76003 335 aaKnown RBP6.51□□□□□ -1.37
SNORA48.4-201ENST00000391089 SEC24BO95487 1268 aa6.51□□□□□ -1.37
SNORA48.4-201ENST00000391089 MX1P20591 662 aa6.51□□□□□ -1.37
SNORA48.4-201ENST00000391089 MFAP1P55081 439 aaKnown RBP6.51□□□□□ -1.37
SNORA48.4-201ENST00000391089 NKX1-1Q15270 411 aaPredicted RBP6.51□□□□□ -1.37
SNORA48.4-201ENST00000391089 BEND3Q5T5X7 828 aa6.51□□□□□ -1.37
SNORA48.4-201ENST00000391089 CLASRPQ8N2M8 674 aaKnown RBP6.51□□□□□ -1.37
SNORA48.4-201ENST00000391089 RGS22Q8NE09 1264 aa6.51□□□□□ -1.37
SNORA48.4-201ENST00000391089 MEIS3Q99687 375 aa6.51□□□□□ -1.37
SNORA48.4-201ENST00000391089 ATG3Q9NT62 314 aa6.51□□□□□ -1.37
SNORA48.4-201ENST00000391089 SPATA31A3Q5VYP0 1347 aa6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 SRCAPQ6ZRS2 3230 aa6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 FOXO3O43524 673 aa6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 SNRPA1P09661 255 aaKnown RBP6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 MCM4P33991 863 aa6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 RAB3GAP1Q15042 981 aa6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 ZNF790Q6PG37 636 aa6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 VSIG10Q8N0Z9 540 aa6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 CNTROBQ8N137 903 aa6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 SLC52A2Q9HAB3 445 aa6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 SNRKQ9NRH2 765 aa6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 PARP4Q9UKK3 1724 aaKnown RBP6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 SOS2Q07890 1332 aaPredicted RBP6.5□□□□□ -1.37
SNORA48.4-201ENST00000391089 NUTM2FA1L443 756 aa6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 RGL2O15211 777 aa6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 HSP90AA1P07900 732 aaKnown RBP6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 SDSP20132 328 aa6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 HMGB2P26583 209 aaKnown RBP6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 LRRFIP1Q32MZ4 808 aaKnown RBP6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 SLC4A10Q6U841 1118 aa6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 FMNL2Q96PY5 1086 aa6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 CDCA7Q9BWT1 371 aaPredicted RBP6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 TM6SF1Q9BZW5 370 aa6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 ATP6V1DQ9Y5K8 247 aa6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 PCDH11XQ9BZA7 1347 aa6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 PCDH11YQ9BZA8 1340 aa6.49□□□□□ -1.37
SNORA48.4-201ENST00000391089 PXDNQ92626 1479 aa6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 IGSF3O75054 1194 aa6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 HSP90B1P14625 803 aaKnown RBP6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 GSPT1P15170 499 aaKnown RBP6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 PHKG2P15735 406 aa6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 NBR1Q14596 966 aa6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 TTC5Q8N0Z6 440 aa6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 RHPN1Q8TCX5 695 aa6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 EVI5LQ96CN4 794 aa6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 ORAI2Q96SN7 254 aa6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 KIF2CQ99661 725 aa6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 ALDH8A1Q9H2A2 487 aaPredicted RBP6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 GPR108Q9NPR9 543 aa6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 SIPA1L3O60292 1781 aaPredicted RBP6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 XIRP1Q702N8 1843 aaKnown RBP6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 WDR17Q8IZU2 1322 aa6.48□□□□□ -1.37
SNORA48.4-201ENST00000391089 PKD1L3Q7Z443 1732 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 ROBO1Q9Y6N7 1651 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 PI4KAP2A4QPH2 592 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 GRM8O00222 908 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 MRE11P49959 708 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 TRIM28Q13263 835 aaKnown RBP6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 ANKRD1Q15327 319 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 CSPP1Q1MSJ5 1256 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 TSGA10IPQ3SY00 556 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 RABL6Q3YEC7 729 aaPredicted RBP6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 RNF20Q5VTR2 975 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 TMED8Q6PL24 325 aaPredicted RBP6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 KIAA1211Q6ZU35 1233 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 PI4KAP1Q8N8J0 262 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 KCNB2Q92953 911 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 ZSCAN31Q96LW9 406 aaPredicted RBP6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 ESYT1Q9BSJ8 1104 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 METTL22Q9BUU2 404 aaPredicted RBP6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 CARD10Q9BWT7 1032 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 COPRSQ9NQ92 184 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 SH2B1Q9NRF2 756 aaPredicted RBP6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 C9orf78Q9NZ63 289 aaPredicted RBP6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 HMG20BQ9P0W2 317 aa6.47□□□□□ -1.37
SNORA48.4-201ENST00000391089 COL18A1P39060 1754 aa6.46□□□□□ -1.37
SNORA48.4-201ENST00000391089 SCN11AQ9UI33 1791 aa6.46□□□□□ -1.37
SNORA48.4-201ENST00000391089 ABCC12Q96J65 1359 aa6.46□□□□□ -1.37
SNORA48.4-201ENST00000391089 SRGAP3O43295 1099 aa6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 SURF6O75683 361 aaKnown RBP6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 PLEKHG5O94827 1062 aa6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 CHMLP26374 656 aa6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 PSMA5P28066 241 aa6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 HSPA4P34932 840 aa6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 CUL4AQ13619 759 aa6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 KRT32Q14532 448 aa6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 KLHL40Q2TBA0 621 aa6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 G2E3Q7L622 706 aa6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 PPP1R42Q7Z4L9 355 aa6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 PLBD2Q8NHP8 589 aa6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 AK7Q96M32 723 aa6.46□□□□□ -1.38
SNORA48.4-201ENST00000391089 ECHDC1Q9NTX5 307 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms