RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 TMC6Q7Z403 805 aa19.83■□□□□ 0.77
SNAPC3-202ENST00000380821 CKAP2LQ8IYA6 745 aa19.83■□□□□ 0.77
SNAPC3-202ENST00000380821 ALS2CR12Q96Q35 445 aa19.83■□□□□ 0.77
SNAPC3-202ENST00000380821 NCOA1Q15788 1441 aa19.83■□□□□ 0.77
SNAPC3-202ENST00000380821 CYB5RLQ6IPT4 315 aa19.83■□□□□ 0.77
SNAPC3-202ENST00000380821 NAA15Q9BXJ9 866 aaKnown RBP19.83■□□□□ 0.77
SNAPC3-202ENST00000380821 SMC1AQ14683 1233 aaKnown RBP19.83■□□□□ 0.76
SNAPC3-202ENST00000380821 FSIP1Q8NA03 581 aa19.83■□□□□ 0.76
SNAPC3-202ENST00000380821 IDH1O75874 414 aaKnown RBP19.83■□□□□ 0.76
SNAPC3-202ENST00000380821 ZNF76P36508 570 aa19.83■□□□□ 0.76
SNAPC3-202ENST00000380821 CCDC178Q5BJE1 867 aa19.83■□□□□ 0.76
SNAPC3-202ENST00000380821 CNNM3Q8NE01 707 aa19.83■□□□□ 0.76
SNAPC3-202ENST00000380821 SMARCC1Q92922 1105 aaPredicted RBP19.83■□□□□ 0.76
SNAPC3-202ENST00000380821 TRMT1Q9NXH9 659 aaKnown RBP19.83■□□□□ 0.76
SNAPC3-202ENST00000380821 TBC1D9Q6ZT07 1266 aa19.82■□□□□ 0.76
SNAPC3-202ENST00000380821 ZNF287Q9HBT7 754 aa19.82■□□□□ 0.76
SNAPC3-202ENST00000380821 PTPN23Q9H3S7 1636 aa19.82■□□□□ 0.76
SNAPC3-202ENST00000380821 IGHMBP2P38935 993 aaKnown RBP19.82■□□□□ 0.76
SNAPC3-202ENST00000380821 SSRP1Q08945 709 aaKnown RBP19.82■□□□□ 0.76
SNAPC3-202ENST00000380821 SEC63Q9UGP8 760 aaKnown RBP19.82■□□□□ 0.76
SNAPC3-202ENST00000380821 GTF2F1P35269 517 aaKnown RBP eCLIP19.81■□□□□ 0.764e-7■■■■□ 24.6
SNAPC3-202ENST00000380821 KLHL10Q6JEL2 608 aa19.81■□□□□ 0.76
SNAPC3-202ENST00000380821 GOLGA6L10A0A0M3HER8 536 aa19.81■□□□□ 0.76
SNAPC3-202ENST00000380821 CLCN1P35523 988 aa19.81■□□□□ 0.76
SNAPC3-202ENST00000380821 EVI5LQ96CN4 794 aa19.81■□□□□ 0.76
SNAPC3-202ENST00000380821 LARP1Q6PKG0 1096 aaKnown RBP19.81■□□□□ 0.76
SNAPC3-202ENST00000380821 DHX37Q8IY37 1157 aaKnown RBP19.81■□□□□ 0.76
SNAPC3-202ENST00000380821 RNF187Q5TA31 235 aaPredicted RBP19.81■□□□□ 0.76
SNAPC3-202ENST00000380821 CTR9Q6PD62 1173 aa19.81■□□□□ 0.76
SNAPC3-202ENST00000380821 PAF1Q8N7H5 531 aa19.8■□□□□ 0.76
SNAPC3-202ENST00000380821 IRX3P78415 501 aaPredicted RBP19.8■□□□□ 0.76
SNAPC3-202ENST00000380821 PYM1Q9BRP8 204 aaKnown RBP19.8■□□□□ 0.76
SNAPC3-202ENST00000380821 KIF20AO95235 890 aa19.8■□□□□ 0.76
SNAPC3-202ENST00000380821 ZNF526Q8TF50 670 aaPredicted RBP19.8■□□□□ 0.76
SNAPC3-202ENST00000380821 CCDC113Q9H0I3 377 aa19.8■□□□□ 0.76
SNAPC3-202ENST00000380821 GIGYF2Q6Y7W6 1299 aaKnown RBP19.8■□□□□ 0.76
SNAPC3-202ENST00000380821 PAXIP1Q6ZW49 1069 aaPredicted RBP19.8■□□□□ 0.76
SNAPC3-202ENST00000380821 NSD2O96028 1365 aa19.79■□□□□ 0.76
SNAPC3-202ENST00000380821 BOLA2Q9H3K6 86 aa19.79■□□□□ 0.76
SNAPC3-202ENST00000380821 IFIT1P09914 478 aaKnown RBP19.79■□□□□ 0.76
SNAPC3-202ENST00000380821 SSR1P43307 286 aaKnown RBP19.79■□□□□ 0.76
SNAPC3-202ENST00000380821 TTC22Q5TAA0 569 aa19.79■□□□□ 0.76
SNAPC3-202ENST00000380821 GPATCH11Q8N954 259 aa19.79■□□□□ 0.76
SNAPC3-202ENST00000380821 ZHX1Q9UKY1 873 aaPredicted RBP19.79■□□□□ 0.76
SNAPC3-202ENST00000380821 SLC12A7Q9Y666 1083 aa19.79■□□□□ 0.76
SNAPC3-202ENST00000380821 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.78■□□□□ 0.76
SNAPC3-202ENST00000380821 METTL24Q5JXM2 366 aa19.78■□□□□ 0.76
SNAPC3-202ENST00000380821 SKAP1Q86WV1 359 aa19.78■□□□□ 0.76
SNAPC3-202ENST00000380821 TRIM27P14373 513 aa19.78■□□□□ 0.76
SNAPC3-202ENST00000380821 KANK3Q6NY19 840 aa19.78■□□□□ 0.76
SNAPC3-202ENST00000380821 RAB34Q9BZG1 259 aa19.78■□□□□ 0.76
SNAPC3-202ENST00000380821 EHBP1Q8NDI1 1231 aa19.78■□□□□ 0.76
SNAPC3-202ENST00000380821 TOM1L2Q6ZVM7 507 aa19.78■□□□□ 0.76
SNAPC3-202ENST00000380821 KRT222Q8N1A0 295 aa19.78■□□□□ 0.76
SNAPC3-202ENST00000380821 GOPCQ9HD26 462 aa19.78■□□□□ 0.76
SNAPC3-202ENST00000380821 FAM135AQ9P2D6 1515 aa19.77■□□□□ 0.76
SNAPC3-202ENST00000380821 FAM114A1Q8IWE2 563 aa19.77■□□□□ 0.76
SNAPC3-202ENST00000380821 RBM27Q9P2N5 1060 aaKnown RBP19.77■□□□□ 0.76
SNAPC3-202ENST00000380821 MCM10Q7L590 875 aa19.77■□□□□ 0.76
SNAPC3-202ENST00000380821 STRN4Q9NRL3 753 aa19.77■□□□□ 0.76
SNAPC3-202ENST00000380821 PCF11O94913 1555 aaKnown RBP19.77■□□□□ 0.76
SNAPC3-202ENST00000380821 TAOK3Q9H2K8 898 aa19.77■□□□□ 0.76
SNAPC3-202ENST00000380821 MATR3P43243 847 aaKnown RBP eCLIP19.77■□□□□ 0.75
SNAPC3-202ENST00000380821 TMEM266Q2M3C6 531 aa19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 HMG20BQ9P0W2 317 aa19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 ZNF213O14771 459 aa19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 ZNF165P49910 485 aa19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 PIBF1Q8WXW3 757 aa19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 TIGD1Q96MW7 591 aa19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 NAPBQ9H115 298 aa19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 GOLGA8AA7E2F4 631 aa19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 GOLGA8BA8MQT2 603 aa19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 TAF7Q15545 349 aaPredicted RBP19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 PROSER2Q86WR7 435 aaPredicted RBP19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 CCDC175P0C221 793 aa19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 RNF41Q9H4P4 317 aaPredicted RBP19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 ZSCAN16Q9H4T2 348 aaPredicted RBP19.76■□□□□ 0.75
SNAPC3-202ENST00000380821 CTCFLQ8NI51 663 aaPredicted RBP19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 EPRSP07814 1512 aaKnown RBP19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 TUBB4AP04350 444 aa19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 USP5P45974 858 aa19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 TNIP1Q15025 636 aa19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 LMAN1P49257 510 aa19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 MAP3K1Q13233 1512 aa19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 IL16Q14005 1332 aa19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 RBM25P49756 843 aaKnown RBP19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 GUCY1B3Q02153 619 aa19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 THEMISQ8N1K5 641 aaPredicted RBP19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 CPLX3Q8WVH0 158 aa19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 BCCIPQ9P287 314 aaKnown RBP eCLIP19.75■□□□□ 0.75
SNAPC3-202ENST00000380821 CAMSAP2Q08AD1 1489 aa19.74■□□□□ 0.75
SNAPC3-202ENST00000380821 TMX1Q9H3N1 280 aa19.74■□□□□ 0.75
SNAPC3-202ENST00000380821 SPINK5Q9NQ38 1064 aaPredicted RBP19.74■□□□□ 0.75
SNAPC3-202ENST00000380821 SPDYE4A6NLX3 237 aa19.74■□□□□ 0.75
SNAPC3-202ENST00000380821 HDAC1Q13547 482 aaPredicted RBP19.74■□□□□ 0.75
SNAPC3-202ENST00000380821 DDX54Q8TDD1 881 aaKnown RBP19.74■□□□□ 0.75
SNAPC3-202ENST00000380821 THUMPD2Q9BTF0 503 aaKnown RBP19.74■□□□□ 0.75
SNAPC3-202ENST00000380821 ZSCAN22P10073 491 aaPredicted RBP19.74■□□□□ 0.75
SNAPC3-202ENST00000380821 KCNH5Q8NCM2 988 aa19.74■□□□□ 0.75
SNAPC3-202ENST00000380821 MIS18AQ9NYP9 233 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms