RNA–Protein interactions for RNA: ENST00000376809.9

HLA-A-203, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,611 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-203ENST00000376809 TEX13AQ9BXU3 409 aaPredicted RBP22.9■■□□□ 1.26
HLA-A-203ENST00000376809 CCNL1Q9UK58 526 aaPredicted RBP22.9■■□□□ 1.26
HLA-A-203ENST00000376809 UPF1Q92900 1129 aaKnown RBP eCLIP22.89■■□□□ 1.25
HLA-A-203ENST00000376809 STK31Q9BXU1 1019 aa22.89■■□□□ 1.25
HLA-A-203ENST00000376809 CHPF2Q9P2E5 772 aa22.88■■□□□ 1.25
HLA-A-203ENST00000376809 STARD3NLO95772 234 aa22.87■■□□□ 1.25
HLA-A-203ENST00000376809 BAG6P46379 1132 aa22.87■■□□□ 1.25
HLA-A-203ENST00000376809 PIP4K2AP48426 406 aaPredicted RBP22.87■■□□□ 1.25
HLA-A-203ENST00000376809 CHMP4AQ9BY43 222 aa22.87■■□□□ 1.25
HLA-A-203ENST00000376809 RGPD3A6NKT7 1758 aaPredicted RBP22.87■■□□□ 1.25
HLA-A-203ENST00000376809 RGPD4Q7Z3J3 1758 aa22.87■■□□□ 1.25
HLA-A-203ENST00000376809 MYH14Q7Z406 1995 aaKnown RBP22.86■■□□□ 1.25
HLA-A-203ENST00000376809 PLSCR1O15162 318 aa22.86■■□□□ 1.25
HLA-A-203ENST00000376809 ANXA1P04083 346 aa22.86■■□□□ 1.25
HLA-A-203ENST00000376809 SLC4A2P04920 1241 aa22.86■■□□□ 1.25
HLA-A-203ENST00000376809 CYP19A1P11511 503 aaPredicted RBP22.86■■□□□ 1.25
HLA-A-203ENST00000376809 A1BGP04217 495 aa22.86■■□□□ 1.25
HLA-A-203ENST00000376809 MRPL50Q8N5N7 158 aaKnown RBP22.86■■□□□ 1.25
HLA-A-203ENST00000376809 DBF4Q9UBU7 674 aaPredicted RBP22.85■■□□□ 1.25
HLA-A-203ENST00000376809 SUPT16HQ9Y5B9 1047 aaKnown RBP22.85■■□□□ 1.25
HLA-A-203ENST00000376809 MYL6BP14649 208 aa22.84■■□□□ 1.25
HLA-A-203ENST00000376809 PROSER3Q2NL68 480 aa22.84■■□□□ 1.25
HLA-A-203ENST00000376809 LINC00116Q8NCU8 138 aa22.84■■□□□ 1.25
HLA-A-203ENST00000376809 LRRC4BQ9NT99 713 aa22.84■■□□□ 1.25
HLA-A-203ENST00000376809 PDIA6Q15084 440 aa22.83■■□□□ 1.25
HLA-A-203ENST00000376809 TXNRD1Q16881 649 aa22.83■■□□□ 1.25
HLA-A-203ENST00000376809 DDX21Q9NR30 783 aaKnown RBP eCLIP22.83■■□□□ 1.25
HLA-A-203ENST00000376809 HMGB2P26583 209 aaKnown RBP22.82■■□□□ 1.24
HLA-A-203ENST00000376809 CRKLP46109 303 aaKnown RBP22.82■■□□□ 1.24
HLA-A-203ENST00000376809 SLC27A3Q5K4L6 730 aa22.82■■□□□ 1.24
HLA-A-203ENST00000376809 PROM2Q8N271 834 aa22.82■■□□□ 1.24
HLA-A-203ENST00000376809 FRAT1Q92837 279 aaPredicted RBP22.82■■□□□ 1.24
HLA-A-203ENST00000376809 NBPF26B4DH59 902 aa22.82■■□□□ 1.24
HLA-A-203ENST00000376809 EN1Q05925 392 aaPredicted RBP22.82■■□□□ 1.24
HLA-A-203ENST00000376809 NBPF14Q5TI25 921 aa22.82■■□□□ 1.24
HLA-A-203ENST00000376809 NBPF10Q6P3W6 841 aaKnown RBP22.82■■□□□ 1.24
HLA-A-203ENST00000376809 G2E3Q7L622 706 aa22.82■■□□□ 1.24
HLA-A-203ENST00000376809 NBPF15Q8N660 670 aa22.82■■□□□ 1.24
HLA-A-203ENST00000376809 ERBB4Q15303 1308 aa22.82■■□□□ 1.24
HLA-A-203ENST00000376809 RREB1Q92766 1687 aa22.81■■□□□ 1.24
HLA-A-203ENST00000376809 C4BP0C0L5 1744 aa22.81■■□□□ 1.24
HLA-A-203ENST00000376809 CANXP27824 592 aaKnown RBP22.81■■□□□ 1.24
HLA-A-203ENST00000376809 ZBTB1Q9Y2K1 713 aa22.81■■□□□ 1.24
HLA-A-203ENST00000376809 KIF16BQ96L93 1317 aa22.8■■□□□ 1.24
HLA-A-203ENST00000376809 BRPF1P55201 1214 aaPredicted RBP22.8■■□□□ 1.24
HLA-A-203ENST00000376809 PHAXQ9H814 394 aaKnown RBP22.8■■□□□ 1.24
HLA-A-203ENST00000376809 CCDC87Q9NVE4 849 aa22.8■■□□□ 1.24
HLA-A-203ENST00000376809 NOB1Q9ULX3 412 aaKnown RBP22.8■■□□□ 1.24
HLA-A-203ENST00000376809 PLIN1O60240 522 aa22.79■■□□□ 1.24
HLA-A-203ENST00000376809 INTS5Q6P9B9 1019 aaKnown RBP22.79■■□□□ 1.24
HLA-A-203ENST00000376809 DEFB132Q7Z7B7 95 aa22.79■■□□□ 1.24
HLA-A-203ENST00000376809 HYPKQ9NX55 129 aa22.79■■□□□ 1.24
HLA-A-203ENST00000376809 ZNF330Q9Y3S2 320 aaPredicted RBP22.79■■□□□ 1.24
HLA-A-203ENST00000376809 RRP1P56182 461 aaKnown RBP22.79■■□□□ 1.24
HLA-A-203ENST00000376809 EZH2Q15910 746 aaKnown RBP22.79■■□□□ 1.24
HLA-A-203ENST00000376809 CNTNAP4Q9C0A0 1308 aa22.78■■□□□ 1.24
HLA-A-203ENST00000376809 FLIIQ13045 1269 aa22.78■■□□□ 1.24
HLA-A-203ENST00000376809 CAMKK2Q96RR4 588 aa22.78■■□□□ 1.24
HLA-A-203ENST00000376809 LRP10Q7Z4F1 713 aa22.77■■□□□ 1.24
HLA-A-203ENST00000376809 AIMP1Q12904 312 aaKnown RBP22.76■■□□□ 1.23
HLA-A-203ENST00000376809 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.76■■□□□ 1.23
HLA-A-203ENST00000376809 XAGE3Q8WTP9 111 aa22.75■■□□□ 1.23
HLA-A-203ENST00000376809 RNF123Q5XPI4 1314 aa22.75■■□□□ 1.23
HLA-A-203ENST00000376809 FKBP5Q13451 457 aaPredicted RBP22.75■■□□□ 1.23
HLA-A-203ENST00000376809 RC3H1Q5TC82 1133 aaKnown RBP22.75■■□□□ 1.23
HLA-A-203ENST00000376809 ZKSCAN2Q63HK3 967 aa22.75■■□□□ 1.23
HLA-A-203ENST00000376809 COPS6Q7L5N1 327 aa22.75■■□□□ 1.23
HLA-A-203ENST00000376809 IPO8O15397 1037 aaKnown RBP22.74■■□□□ 1.23
HLA-A-203ENST00000376809 IL6STP40189 918 aaPredicted RBP22.74■■□□□ 1.23
HLA-A-203ENST00000376809 TNNQ9UQP3 1299 aa22.74■■□□□ 1.23
HLA-A-203ENST00000376809 UBR3Q6ZT12 1888 aa22.73■■□□□ 1.23
HLA-A-203ENST00000376809 PTPRCP08575 1304 aa22.73■■□□□ 1.23
HLA-A-203ENST00000376809 GNPATO15228 680 aa22.73■■□□□ 1.23
HLA-A-203ENST00000376809 AK7Q96M32 723 aa22.73■■□□□ 1.23
HLA-A-203ENST00000376809 NUP188Q5SRE5 1749 aa22.73■■□□□ 1.23
HLA-A-203ENST00000376809 TRIM27P14373 513 aa22.72■■□□□ 1.23
HLA-A-203ENST00000376809 ATF7IPQ6VMQ6 1270 aa22.72■■□□□ 1.23
HLA-A-203ENST00000376809 NPM2Q86SE8 214 aaKnown RBP22.72■■□□□ 1.23
HLA-A-203ENST00000376809 EIF5P55010 431 aaKnown RBP22.71■■□□□ 1.23
HLA-A-203ENST00000376809 TTLL7Q6ZT98 887 aa22.71■■□□□ 1.23
HLA-A-203ENST00000376809 CLUAP1Q96AJ1 413 aa22.71■■□□□ 1.23
HLA-A-203ENST00000376809 ARXQ96QS3 562 aa22.71■■□□□ 1.23
HLA-A-203ENST00000376809 SMIM5Q71RC9 77 aa22.71■■□□□ 1.23
HLA-A-203ENST00000376809 ARHGAP45Q92619 1136 aa22.71■■□□□ 1.23
HLA-A-203ENST00000376809 TUBGCP6Q96RT7 1819 aa22.7■■□□□ 1.23
HLA-A-203ENST00000376809 ARFGEF2Q9Y6D5 1785 aa22.7■■□□□ 1.22
HLA-A-203ENST00000376809 COL15A1P39059 1388 aa22.7■■□□□ 1.22
HLA-A-203ENST00000376809 F6X3S4 739 aa22.7■■□□□ 1.22
HLA-A-203ENST00000376809 RPS6KA4O75676 772 aa22.7■■□□□ 1.22
HLA-A-203ENST00000376809 API5Q9BZZ5 524 aaKnown RBP22.7■■□□□ 1.22
HLA-A-203ENST00000376809 RTCBQ9Y3I0 505 aaKnown RBP22.7■■□□□ 1.22
HLA-A-203ENST00000376809 DDX58O95786 925 aaKnown RBP22.69■■□□□ 1.22
HLA-A-203ENST00000376809 C20orf194Q5TEA3 1177 aa22.69■■□□□ 1.22
HLA-A-203ENST00000376809 PI4KAP2A4QPH2 592 aa22.68■■□□□ 1.22
HLA-A-203ENST00000376809 ZNF827Q17R98 1081 aa22.68■■□□□ 1.22
HLA-A-203ENST00000376809 AMIGO3Q86WK7 504 aa22.68■■□□□ 1.22
HLA-A-203ENST00000376809 PI4KAP1Q8N8J0 262 aa22.68■■□□□ 1.22
HLA-A-203ENST00000376809 C4AP0C0L4 1744 aa22.68■■□□□ 1.22
HLA-A-203ENST00000376809 ADCY9O60503 1353 aa22.68■■□□□ 1.22
HLA-A-203ENST00000376809 PHF14O94880 888 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms