RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SETD1AO15047 1707 aaKnown RBP19.85■□□□□ 0.77
TRIM39-201ENST00000376656 GNAI3P08754 354 aa19.84■□□□□ 0.77
TRIM39-201ENST00000376656 AK2P54819 239 aa19.84■□□□□ 0.77
TRIM39-201ENST00000376656 F13A1P00488 732 aa19.84■□□□□ 0.77
TRIM39-201ENST00000376656 TTC14Q96N46 770 aa19.84■□□□□ 0.77
TRIM39-201ENST00000376656 KIAA1524Q8TCG1 905 aa19.84■□□□□ 0.77
TRIM39-201ENST00000376656 RUFY3Q7L099 469 aa19.83■□□□□ 0.77
TRIM39-201ENST00000376656 NECTIN2Q92692 538 aa19.83■□□□□ 0.77
TRIM39-201ENST00000376656 RASEFQ8IZ41 740 aa19.83■□□□□ 0.76
TRIM39-201ENST00000376656 NEO1Q92859 1461 aa19.83■□□□□ 0.76
TRIM39-201ENST00000376656 FLIIQ13045 1269 aa19.82■□□□□ 0.76
TRIM39-201ENST00000376656 RAD50Q92878 1312 aa19.82■□□□□ 0.76
TRIM39-201ENST00000376656 SPC24Q8NBT2 197 aa19.82■□□□□ 0.76
TRIM39-201ENST00000376656 STK31Q9BXU1 1019 aa19.82■□□□□ 0.76
TRIM39-201ENST00000376656 MTHFSDQ2M296 383 aaKnown RBP19.82■□□□□ 0.76
TRIM39-201ENST00000376656 CPA1P15085 419 aa19.81■□□□□ 0.76
TRIM39-201ENST00000376656 SMC3Q9UQE7 1217 aa19.81■□□□□ 0.76
TRIM39-201ENST00000376656 AKAP12Q02952 1782 aa19.81■□□□□ 0.76
TRIM39-201ENST00000376656 RIOK3O14730 519 aaKnown RBP19.81■□□□□ 0.76
TRIM39-201ENST00000376656 LARGE1O95461 756 aa19.81■□□□□ 0.76
TRIM39-201ENST00000376656 SOX12O15370 315 aa19.81■□□□□ 0.76
TRIM39-201ENST00000376656 RTF1Q92541 710 aaKnown RBP19.81■□□□□ 0.76
TRIM39-201ENST00000376656 LIMCH1Q9UPQ0 1083 aa19.81■□□□□ 0.76
TRIM39-201ENST00000376656 AOX1Q06278 1338 aa19.8■□□□□ 0.76
TRIM39-201ENST00000376656 PRR36Q9H6K5 1346 aa19.8■□□□□ 0.76
TRIM39-201ENST00000376656 RICTORQ6R327 1708 aa19.8■□□□□ 0.76
TRIM39-201ENST00000376656 SGSM2O43147 1006 aa19.8■□□□□ 0.76
TRIM39-201ENST00000376656 EPB41L2O43491 1005 aaKnown RBP19.8■□□□□ 0.76
TRIM39-201ENST00000376656 DNM1Q05193 864 aaKnown RBP19.8■□□□□ 0.76
TRIM39-201ENST00000376656 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.8■□□□□ 0.76
TRIM39-201ENST00000376656 ITSN1Q15811 1721 aa19.8■□□□□ 0.76
TRIM39-201ENST00000376656 RIMS1Q86UR5 1692 aaKnown RBP19.8■□□□□ 0.76
TRIM39-201ENST00000376656 METP08581 1390 aa19.79■□□□□ 0.76
TRIM39-201ENST00000376656 PEAK1Q9H792 1746 aa19.79■□□□□ 0.76
TRIM39-201ENST00000376656 SPDYE4A6NLX3 237 aa19.79■□□□□ 0.76
TRIM39-201ENST00000376656 LSG1Q9H089 658 aaKnown RBP19.79■□□□□ 0.76
TRIM39-201ENST00000376656 MAP3K19Q56UN5 1328 aa19.79■□□□□ 0.76
TRIM39-201ENST00000376656 PDCL2Q8N4E4 241 aa19.79■□□□□ 0.76
TRIM39-201ENST00000376656 A2ML1A8K2U0 1454 aa19.79■□□□□ 0.76
TRIM39-201ENST00000376656 ARHGEF10O15013 1369 aa19.78■□□□□ 0.76
TRIM39-201ENST00000376656 RGPD1P0DJD0 1748 aa19.78■□□□□ 0.76
TRIM39-201ENST00000376656 XRN1Q8IZH2 1706 aaKnown RBP19.78■□□□□ 0.76
TRIM39-201ENST00000376656 PI4K2BQ8TCG2 481 aa19.78■□□□□ 0.76
TRIM39-201ENST00000376656 CCDC83Q8IWF9 413 aa19.78■□□□□ 0.76
TRIM39-201ENST00000376656 USP44Q9H0E7 712 aa19.78■□□□□ 0.76
TRIM39-201ENST00000376656 DIAPH3Q9NSV4 1193 aa19.78■□□□□ 0.76
TRIM39-201ENST00000376656 ATP6V1DQ9Y5K8 247 aa19.78■□□□□ 0.76
TRIM39-201ENST00000376656 SOS1Q07889 1333 aaPredicted RBP19.77■□□□□ 0.76
TRIM39-201ENST00000376656 TTC21BQ7Z4L5 1316 aa19.77■□□□□ 0.76
TRIM39-201ENST00000376656 GJB2P29033 226 aa19.77■□□□□ 0.75
TRIM39-201ENST00000376656 MTMR6Q9Y217 621 aa19.77■□□□□ 0.75
TRIM39-201ENST00000376656 SPG7Q9UQ90 795 aa19.76■□□□□ 0.75
TRIM39-201ENST00000376656 CHAF1AQ13111 956 aaPredicted RBP19.76■□□□□ 0.75
TRIM39-201ENST00000376656 CASTP20810 708 aaKnown RBP19.76■□□□□ 0.75
TRIM39-201ENST00000376656 SURF6O75683 361 aaKnown RBP19.75■□□□□ 0.75
TRIM39-201ENST00000376656 UBTFL1P0CB47 393 aaPredicted RBP19.75■□□□□ 0.75
TRIM39-201ENST00000376656 U2AF2P26368 475 aaKnown RBP eCLIP19.75■□□□□ 0.75
TRIM39-201ENST00000376656 CCDC30Q5VVM6 783 aa19.75■□□□□ 0.75
TRIM39-201ENST00000376656 CWC27Q6UX04 472 aaKnown RBP19.75■□□□□ 0.75
TRIM39-201ENST00000376656 ANKRD7Q92527 254 aa19.75■□□□□ 0.75
TRIM39-201ENST00000376656 SSH3Q8TE77 659 aa19.75■□□□□ 0.75
TRIM39-201ENST00000376656 GTPBP4Q9BZE4 634 aaKnown RBP19.75■□□□□ 0.75
TRIM39-201ENST00000376656 HYPKQ9NX55 129 aa19.74■□□□□ 0.75
TRIM39-201ENST00000376656 OVOS2A0A0J9YW53 1432 aa19.74■□□□□ 0.75
TRIM39-201ENST00000376656 OVOS2Q6IE36 1432 aa19.74■□□□□ 0.75
TRIM39-201ENST00000376656 TPM3P06753 285 aa19.74■□□□□ 0.75
TRIM39-201ENST00000376656 PTGS1P23219 599 aa19.74■□□□□ 0.75
TRIM39-201ENST00000376656 FAM208AQ9UK61 1670 aaKnown RBP19.74■□□□□ 0.75
TRIM39-201ENST00000376656 PPP1R42Q7Z4L9 355 aa19.74■□□□□ 0.75
TRIM39-201ENST00000376656 NRXN3Q9Y4C0 1643 aa19.73■□□□□ 0.75
TRIM39-201ENST00000376656 RHPN1Q8TCX5 695 aa19.73■□□□□ 0.75
TRIM39-201ENST00000376656 VPS37CA5D8V6 355 aaPredicted RBP19.73■□□□□ 0.75
TRIM39-201ENST00000376656 CCDC192P0DO97 292 aa19.73■□□□□ 0.75
TRIM39-201ENST00000376656 CHMP3Q9Y3E7 222 aa19.73■□□□□ 0.75
TRIM39-201ENST00000376656 GOLGA6L6A8MZA4 724 aa19.73■□□□□ 0.75
TRIM39-201ENST00000376656 CTIFO43310 598 aaKnown RBP19.73■□□□□ 0.75
TRIM39-201ENST00000376656 NUTM2FA1L443 756 aa19.72■□□□□ 0.75
TRIM39-201ENST00000376656 ADCK5Q3MIX3 580 aa19.72■□□□□ 0.75
TRIM39-201ENST00000376656 CNTROBQ8N137 903 aa19.72■□□□□ 0.75
TRIM39-201ENST00000376656 ST3GAL1Q11201 340 aa19.71■□□□□ 0.75
TRIM39-201ENST00000376656 ACEP12821 1306 aa19.71■□□□□ 0.75
TRIM39-201ENST00000376656 RAB11FIP3O75154 756 aa19.71■□□□□ 0.75
TRIM39-201ENST00000376656 CAMK4Q16566 473 aa19.71■□□□□ 0.75
TRIM39-201ENST00000376656 DDX54Q8TDD1 881 aaKnown RBP19.71■□□□□ 0.75
TRIM39-201ENST00000376656 SPATA31D1Q6ZQQ2 1576 aa19.71■□□□□ 0.75
TRIM39-201ENST00000376656 LUZP1Q86V48 1076 aa19.7■□□□□ 0.74
TRIM39-201ENST00000376656 FAM200AQ8TCP9 573 aa19.7■□□□□ 0.74
TRIM39-201ENST00000376656 JAKMIP1Q96N16 626 aaKnown RBP19.7■□□□□ 0.74
TRIM39-201ENST00000376656 PDRG1Q9NUG6 133 aa19.7■□□□□ 0.74
TRIM39-201ENST00000376656 PTH1RQ03431 593 aa19.7■□□□□ 0.74
TRIM39-201ENST00000376656 TTC6Q86TZ1 520 aa19.7■□□□□ 0.74
TRIM39-201ENST00000376656 MRVI1Q9Y6F6 885 aa19.7■□□□□ 0.74
TRIM39-201ENST00000376656 POLA2Q14181 598 aa19.69■□□□□ 0.74
TRIM39-201ENST00000376656 KLHL34Q8N239 644 aa19.69■□□□□ 0.74
TRIM39-201ENST00000376656 NECAB1Q8N987 351 aa19.69■□□□□ 0.74
TRIM39-201ENST00000376656 LIG1P18858 919 aa19.69■□□□□ 0.74
TRIM39-201ENST00000376656 LRMPQ12912 555 aa19.69■□□□□ 0.74
TRIM39-201ENST00000376656 IGSF3O75054 1194 aa19.68■□□□□ 0.74
TRIM39-201ENST00000376656 TYRO3Q06418 890 aa19.68■□□□□ 0.74
TRIM39-201ENST00000376656 PRPF40BQ6NWY9 871 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms