RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 DDX21Q9NR30 783 aaKnown RBP eCLIP29.32■■■□□ 2.28
HLA-C-202ENST00000376237 C5P01031 1676 aa29.32■■■□□ 2.28
HLA-C-202ENST00000376237 IPO8O15397 1037 aaKnown RBP29.31■■■□□ 2.28
HLA-C-202ENST00000376237 CHPF2Q9P2E5 772 aa29.31■■■□□ 2.28
HLA-C-202ENST00000376237 APBA3O96018 575 aa29.3■■■□□ 2.28
HLA-C-202ENST00000376237 CYP19A1P11511 503 aaPredicted RBP29.3■■■□□ 2.28
HLA-C-202ENST00000376237 RRP1P56182 461 aaKnown RBP29.3■■■□□ 2.28
HLA-C-202ENST00000376237 HYPKQ9NX55 129 aa29.3■■■□□ 2.28
HLA-C-202ENST00000376237 CICQ96RK0 1608 aaPredicted RBP29.3■■■□□ 2.28
HLA-C-202ENST00000376237 LAMB4A4D0S4 1761 aa29.3■■■□□ 2.28
HLA-C-202ENST00000376237 SLC27A3Q5K4L6 730 aa29.3■■■□□ 2.28
HLA-C-202ENST00000376237 CCNL1Q9UK58 526 aaPredicted RBP29.3■■■□□ 2.28
HLA-C-202ENST00000376237 ARHGAP45Q92619 1136 aa29.29■■■□□ 2.28
HLA-C-202ENST00000376237 ITPK1Q13572 414 aa29.28■■■□□ 2.28
HLA-C-202ENST00000376237 PDIA6Q15084 440 aa29.28■■■□□ 2.28
HLA-C-202ENST00000376237 FRAT1Q92837 279 aaPredicted RBP29.28■■■□□ 2.28
HLA-C-202ENST00000376237 CANXP27824 592 aaKnown RBP29.27■■■□□ 2.28
HLA-C-202ENST00000376237 NOB1Q9ULX3 412 aaKnown RBP29.27■■■□□ 2.28
HLA-C-202ENST00000376237 LY75O60449 1722 aa29.27■■■□□ 2.28
HLA-C-202ENST00000376237 ZKSCAN2Q63HK3 967 aa29.26■■■□□ 2.27
HLA-C-202ENST00000376237 PTPRCP08575 1304 aa29.26■■■□□ 2.27
HLA-C-202ENST00000376237 TJP1Q07157 1748 aa29.25■■■□□ 2.27
HLA-C-202ENST00000376237 A1BGP04217 495 aa29.25■■■□□ 2.27
HLA-C-202ENST00000376237 EP400Q96L91 3159 aa29.25■■■□□ 2.27
HLA-C-202ENST00000376237 SF3B2Q13435 895 aaKnown RBP29.25■■■□□ 2.27
HLA-C-202ENST00000376237 MS4A1P11836 297 aa29.24■■■□□ 2.27
HLA-C-202ENST00000376237 FLIIQ13045 1269 aa29.24■■■□□ 2.27
HLA-C-202ENST00000376237 CCDC125Q86Z20 511 aa29.24■■■□□ 2.27
HLA-C-202ENST00000376237 CACNA1FO60840 1977 aa29.23■■■□□ 2.27
HLA-C-202ENST00000376237 ATF7IPQ6VMQ6 1270 aa29.23■■■□□ 2.27
HLA-C-202ENST00000376237 NBPF26B4DH59 902 aa29.22■■■□□ 2.27
HLA-C-202ENST00000376237 MYL6BP14649 208 aa29.22■■■□□ 2.27
HLA-C-202ENST00000376237 CRKLP46109 303 aaKnown RBP29.22■■■□□ 2.27
HLA-C-202ENST00000376237 TXNRD1Q16881 649 aa29.22■■■□□ 2.27
HLA-C-202ENST00000376237 PROSER3Q2NL68 480 aa29.22■■■□□ 2.27
HLA-C-202ENST00000376237 RC3H1Q5TC82 1133 aaKnown RBP29.22■■■□□ 2.27
HLA-C-202ENST00000376237 NBPF14Q5TI25 921 aa29.22■■■□□ 2.27
HLA-C-202ENST00000376237 NBPF10Q6P3W6 841 aaKnown RBP29.22■■■□□ 2.27
HLA-C-202ENST00000376237 NBPF15Q8N660 670 aa29.22■■■□□ 2.27
HLA-C-202ENST00000376237 API5Q9BZZ5 524 aaKnown RBP29.22■■■□□ 2.27
HLA-C-202ENST00000376237 CCDC87Q9NVE4 849 aa29.22■■■□□ 2.27
HLA-C-202ENST00000376237 PLIN1O60240 522 aa29.21■■■□□ 2.27
HLA-C-202ENST00000376237 G2E3Q7L622 706 aa29.21■■■□□ 2.27
HLA-C-202ENST00000376237 PHAXQ9H814 394 aaKnown RBP29.21■■■□□ 2.27
HLA-C-202ENST00000376237 TNS1Q9HBL0 1735 aaKnown RBP29.2■■■□□ 2.27
HLA-C-202ENST00000376237 CNTNAP4Q9C0A0 1308 aa29.2■■■□□ 2.27
HLA-C-202ENST00000376237 ANXA1P04083 346 aa29.2■■■□□ 2.27
HLA-C-202ENST00000376237 LRP10Q7Z4F1 713 aa29.2■■■□□ 2.27
HLA-C-202ENST00000376237 LINC00116Q8NCU8 138 aa29.2■■■□□ 2.27
HLA-C-202ENST00000376237 PDE3AQ14432 1141 aa29.2■■■□□ 2.26
HLA-C-202ENST00000376237 INTS5Q6P9B9 1019 aaKnown RBP29.2■■■□□ 2.26
HLA-C-202ENST00000376237 IL6STP40189 918 aaPredicted RBP29.19■■■□□ 2.26
HLA-C-202ENST00000376237 KCNQ4P56696 695 aa29.19■■■□□ 2.26
HLA-C-202ENST00000376237 FKBP5Q13451 457 aaPredicted RBP29.19■■■□□ 2.26
HLA-C-202ENST00000376237 LRRC4BQ9NT99 713 aa29.19■■■□□ 2.26
HLA-C-202ENST00000376237 DDX58O95786 925 aaKnown RBP29.18■■■□□ 2.26
HLA-C-202ENST00000376237 TRIM27P14373 513 aa29.18■■■□□ 2.26
HLA-C-202ENST00000376237 PROM2Q8N271 834 aa29.18■■■□□ 2.26
HLA-C-202ENST00000376237 ZBTB1Q9Y2K1 713 aa29.18■■■□□ 2.26
HLA-C-202ENST00000376237 BAG6P46379 1132 aa29.17■■■□□ 2.26
HLA-C-202ENST00000376237 PIP4K2AP48426 406 aaPredicted RBP29.17■■■□□ 2.26
HLA-C-202ENST00000376237 NPM2Q86SE8 214 aaKnown RBP29.17■■■□□ 2.26
HLA-C-202ENST00000376237 RGPD3A6NKT7 1758 aaPredicted RBP29.16■■■□□ 2.26
HLA-C-202ENST00000376237 RGPD4Q7Z3J3 1758 aa29.16■■■□□ 2.26
HLA-C-202ENST00000376237 COPS6Q7L5N1 327 aa29.16■■■□□ 2.26
HLA-C-202ENST00000376237 COL5A3P25940 1745 aaPredicted RBP29.16■■■□□ 2.26
HLA-C-202ENST00000376237 DZIP1LQ8IYY4 767 aaKnown RBP29.15■■■□□ 2.26
HLA-C-202ENST00000376237 XAGE3Q8WTP9 111 aa29.15■■■□□ 2.26
HLA-C-202ENST00000376237 NEFLP07196 543 aa29.15■■■□□ 2.26
HLA-C-202ENST00000376237 FTSJ3Q8IY81 847 aaKnown RBP29.15■■■□□ 2.26
HLA-C-202ENST00000376237 AIMP1Q12904 312 aaKnown RBP29.14■■■□□ 2.25
HLA-C-202ENST00000376237 EIF5P55010 431 aaKnown RBP29.13■■■□□ 2.25
HLA-C-202ENST00000376237 CAMKK2Q96RR4 588 aa29.13■■■□□ 2.25
HLA-C-202ENST00000376237 RREB1Q92766 1687 aa29.12■■■□□ 2.25
HLA-C-202ENST00000376237 KSR2Q6VAB6 950 aa29.12■■■□□ 2.25
HLA-C-202ENST00000376237 RPS6KA4O75676 772 aa29.11■■■□□ 2.25
HLA-C-202ENST00000376237 ANKRD13DQ6ZTN6 518 aa29.11■■■□□ 2.25
HLA-C-202ENST00000376237 CLUAP1Q96AJ1 413 aa29.11■■■□□ 2.25
HLA-C-202ENST00000376237 EN1Q05925 392 aaPredicted RBP29.1■■■□□ 2.25
HLA-C-202ENST00000376237 ZNF330Q9Y3S2 320 aaPredicted RBP29.1■■■□□ 2.25
HLA-C-202ENST00000376237 ABCC4O15439 1325 aa29.1■■■□□ 2.25
HLA-C-202ENST00000376237 PI4KAP2A4QPH2 592 aa29.1■■■□□ 2.25
HLA-C-202ENST00000376237 PI4KAP1Q8N8J0 262 aa29.1■■■□□ 2.25
HLA-C-202ENST00000376237 PLBD2Q8NHP8 589 aa29.1■■■□□ 2.25
HLA-C-202ENST00000376237 AK7Q96M32 723 aa29.1■■■□□ 2.25
HLA-C-202ENST00000376237 TAF1LQ8IZX4 1826 aa29.09■■■□□ 2.25
HLA-C-202ENST00000376237 A0A087WZG4 1122 aa29.09■■■□□ 2.25
HLA-C-202ENST00000376237 C20orf194Q5TEA3 1177 aa29.09■■■□□ 2.25
HLA-C-202ENST00000376237 RTCBQ9Y3I0 505 aaKnown RBP29.09■■■□□ 2.25
HLA-C-202ENST00000376237 C4BP0C0L5 1744 aa29.08■■■□□ 2.25
HLA-C-202ENST00000376237 GNPATO15228 680 aa29.08■■■□□ 2.25
HLA-C-202ENST00000376237 KIF6Q6ZMV9 814 aa29.08■■■□□ 2.25
HLA-C-202ENST00000376237 RIC3Q7Z5B4 369 aa29.08■■■□□ 2.25
HLA-C-202ENST00000376237 DNAAF4Q8WXU2 420 aa29.08■■■□□ 2.25
HLA-C-202ENST00000376237 EZH2Q15910 746 aaKnown RBP29.07■■■□□ 2.24
HLA-C-202ENST00000376237 TTLL7Q6ZT98 887 aa29.07■■■□□ 2.24
HLA-C-202ENST00000376237 PANK1Q8TE04 598 aa29.07■■■□□ 2.24
HLA-C-202ENST00000376237 TNNQ9UQP3 1299 aa29.07■■■□□ 2.24
HLA-C-202ENST00000376237 ADCY9O60503 1353 aa29.06■■■□□ 2.24
HLA-C-202ENST00000376237 F6X3S4 739 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms