RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 HSP90AA2PQ14568 343 aaPredicted RBP12.75□□□□□ -0.37
ZNF549-202ENST00000376233 PTCH1Q13635 1447 aa12.75□□□□□ -0.37
ZNF549-202ENST00000376233 H3BQV1 296 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 NBPF6Q5VWK0 638 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 NBPF4Q96M43 638 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 TCEANC2Q96MN5 208 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 CYP46A1Q9Y6A2 500 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 RNF20Q5VTR2 975 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 SIRT1Q96EB6 747 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 KIAA0232Q92628 1395 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 CD163L1Q9NR16 1453 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 ANKRD24Q8TF21 1146 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 USP44Q9H0E7 712 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 TSPY26PQ9H489 355 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 PDRG1Q9NUG6 133 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 PALD1Q9ULE6 856 aa12.74□□□□□ -0.37
ZNF549-202ENST00000376233 FAM184AQ8NB25 1140 aa12.73□□□□□ -0.37
ZNF549-202ENST00000376233 TATP17735 454 aaPredicted RBP12.73□□□□□ -0.37
ZNF549-202ENST00000376233 CSPP1Q1MSJ5 1256 aa12.73□□□□□ -0.37
ZNF549-202ENST00000376233 USP6P35125 1406 aa12.73□□□□□ -0.37
ZNF549-202ENST00000376233 PRIM1P49642 420 aaKnown RBP12.73□□□□□ -0.37
ZNF549-202ENST00000376233 KIF2CQ99661 725 aa12.73□□□□□ -0.37
ZNF549-202ENST00000376233 ERC1Q8IUD2 1116 aa12.73□□□□□ -0.37
ZNF549-202ENST00000376233 UNC5CLQ8IV45 518 aa12.73□□□□□ -0.37
ZNF549-202ENST00000376233 MYD88Q99836 296 aa12.73□□□□□ -0.37
ZNF549-202ENST00000376233 SOS1Q07889 1333 aaPredicted RBP12.72□□□□□ -0.37
ZNF549-202ENST00000376233 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
ZNF549-202ENST00000376233 ORAI2Q96SN7 254 aa12.72□□□□□ -0.37
ZNF549-202ENST00000376233 MED14O60244 1454 aa12.72□□□□□ -0.37
ZNF549-202ENST00000376233 CPS1P31327 1500 aa12.72□□□□□ -0.37
ZNF549-202ENST00000376233 CHRNA2Q15822 529 aa12.72□□□□□ -0.37
ZNF549-202ENST00000376233 BICD2Q8TD16 824 aa12.72□□□□□ -0.37
ZNF549-202ENST00000376233 ECHDC1Q9NTX5 307 aa12.72□□□□□ -0.37
ZNF549-202ENST00000376233 ATP5J2-PTCD1G3V325 749 aa12.71□□□□□ -0.37
ZNF549-202ENST00000376233 PTCD1O75127 700 aaKnown RBP12.71□□□□□ -0.37
ZNF549-202ENST00000376233 CEBPZQ03701 1054 aaKnown RBP12.71□□□□□ -0.37
ZNF549-202ENST00000376233 CPSF1Q10570 1443 aaKnown RBP12.71□□□□□ -0.37
ZNF549-202ENST00000376233 NEURL4Q96JN8 1562 aa12.71□□□□□ -0.37
ZNF549-202ENST00000376233 FAM13BQ9NYF5 915 aa12.71□□□□□ -0.37
ZNF549-202ENST00000376233 CCDC85AQ96PX6 553 aaPredicted RBP12.71□□□□□ -0.37
ZNF549-202ENST00000376233 MYO3AQ8NEV4 1616 aa12.71□□□□□ -0.37
ZNF549-202ENST00000376233 ARHGEF28Q8N1W1 1705 aaKnown RBP12.71□□□□□ -0.38
ZNF549-202ENST00000376233 AMOTQ4VCS5 1084 aa12.71□□□□□ -0.38
ZNF549-202ENST00000376233 LARP1BQ659C4 914 aaKnown RBP12.71□□□□□ -0.38
ZNF549-202ENST00000376233 COL3A1P02461 1466 aaPredicted RBP12.71□□□□□ -0.38
ZNF549-202ENST00000376233 GCP02774 474 aa12.7□□□□□ -0.38
ZNF549-202ENST00000376233 NECAB1Q8N987 351 aa12.7□□□□□ -0.38
ZNF549-202ENST00000376233 FBXW7Q969H0 707 aa12.7□□□□□ -0.38
ZNF549-202ENST00000376233 ARHGEF10O15013 1369 aa12.7□□□□□ -0.38
ZNF549-202ENST00000376233 KRT28Q7Z3Y7 464 aa12.7□□□□□ -0.38
ZNF549-202ENST00000376233 IP6K1Q92551 441 aa12.7□□□□□ -0.38
ZNF549-202ENST00000376233 ZSCAN30Q86W11 494 aa12.7□□□□□ -0.38
ZNF549-202ENST00000376233 CABLES1Q8TDN4 633 aa12.7□□□□□ -0.38
ZNF549-202ENST00000376233 LIMCH1Q9UPQ0 1083 aa12.7□□□□□ -0.38
ZNF549-202ENST00000376233 SHPRHQ149N8 1683 aa12.7□□□□□ -0.38
ZNF549-202ENST00000376233 CABP4P57796 275 aa12.69□□□□□ -0.38
ZNF549-202ENST00000376233 BLOC1S2Q6QNY1 142 aa12.69□□□□□ -0.38
ZNF549-202ENST00000376233 KLHDC4Q8TBB5 520 aa12.69□□□□□ -0.38
ZNF549-202ENST00000376233 PPFIA3O75145 1194 aa12.69□□□□□ -0.38
ZNF549-202ENST00000376233 PSMA5P28066 241 aa12.69□□□□□ -0.38
ZNF549-202ENST00000376233 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
ZNF549-202ENST00000376233 KIF24Q5T7B8 1368 aa12.68□□□□□ -0.38
ZNF549-202ENST00000376233 FSD2A1L4K1 749 aa12.68□□□□□ -0.38
ZNF549-202ENST00000376233 EVA1CP58658 441 aa12.68□□□□□ -0.38
ZNF549-202ENST00000376233 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
ZNF549-202ENST00000376233 RBM10P98175 930 aaKnown RBP12.68□□□□□ -0.38
ZNF549-202ENST00000376233 STRN4Q9NRL3 753 aa12.68□□□□□ -0.38
ZNF549-202ENST00000376233 UBE3BQ7Z3V4 1068 aa12.68□□□□□ -0.38
ZNF549-202ENST00000376233 DDX11Q96FC9 970 aa12.68□□□□□ -0.38
ZNF549-202ENST00000376233 LMBRD1Q9NUN5 540 aa12.68□□□□□ -0.38
ZNF549-202ENST00000376233 CNPY2Q9Y2B0 182 aa12.68□□□□□ -0.38
ZNF549-202ENST00000376233 AK2P54819 239 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 EIF4A1P60842 406 aaKnown RBP12.67□□□□□ -0.38
ZNF549-202ENST00000376233 COPS6Q7L5N1 327 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 SYTL4Q96C24 671 aaPredicted RBP12.67□□□□□ -0.38
ZNF549-202ENST00000376233 KDM4AO75164 1064 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 CLCN1P35523 988 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 LARP1Q6PKG0 1096 aaKnown RBP12.67□□□□□ -0.38
ZNF549-202ENST00000376233 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.67□□□□□ -0.38
ZNF549-202ENST00000376233 SPC24Q8NBT2 197 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 XAGE3Q8WTP9 111 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 RBSNQ9H1K0 784 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 HYPKQ9NX55 129 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 KSR2Q6VAB6 950 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 NLRP1Q9C000 1473 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 STX6O43752 255 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 GJB2P29033 226 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 GNL2Q13823 731 aaKnown RBP12.67□□□□□ -0.38
ZNF549-202ENST00000376233 WASHC4Q2M389 1173 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 USP48Q86UV5 1035 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 NFATC2IPQ8NCF5 419 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 CCDC39Q9UFE4 941 aa12.67□□□□□ -0.38
ZNF549-202ENST00000376233 GRM8O00222 908 aa12.66□□□□□ -0.38
ZNF549-202ENST00000376233 ANAPC15P60006 121 aa12.66□□□□□ -0.38
ZNF549-202ENST00000376233 CHAF1AQ13111 956 aaPredicted RBP12.66□□□□□ -0.38
ZNF549-202ENST00000376233 CAMK4Q16566 473 aa12.66□□□□□ -0.38
ZNF549-202ENST00000376233 BCL11BQ9C0K0 894 aaPredicted RBP12.66□□□□□ -0.38
ZNF549-202ENST00000376233 PRAMEF22A3QJZ6 481 aa12.66□□□□□ -0.38
ZNF549-202ENST00000376233 RNMTO43148 476 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms