RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 HFM1A2PYH4 1435 aa9.64□□□□□ -0.87
HSPG2-203ENST00000374695 ITSN2Q9NZM3 1697 aa9.64□□□□□ -0.87
HSPG2-203ENST00000374695 A0A1W2PRG0 241 aa9.64□□□□□ -0.87
HSPG2-203ENST00000374695 CCDC12Q8WUD4 166 aaPredicted RBP9.64□□□□□ -0.87
HSPG2-203ENST00000374695 KDM4AO75164 1064 aa9.64□□□□□ -0.87
HSPG2-203ENST00000374695 CCDC94Q9BW85 323 aaPredicted RBP9.64□□□□□ -0.87
HSPG2-203ENST00000374695 IQCGQ9H095 443 aaKnown RBP9.64□□□□□ -0.87
HSPG2-203ENST00000374695 KIF4AO95239 1232 aa9.64□□□□□ -0.87
HSPG2-203ENST00000374695 AMPD3Q01432 767 aa9.64□□□□□ -0.87
HSPG2-203ENST00000374695 MAATS1Q7Z4T9 603 aa9.64□□□□□ -0.87
HSPG2-203ENST00000374695 SMC6Q96SB8 1091 aa9.64□□□□□ -0.87
HSPG2-203ENST00000374695 URI1O94763 535 aaPredicted RBP9.64□□□□□ -0.87
HSPG2-203ENST00000374695 BRD2P25440 801 aaKnown RBP9.64□□□□□ -0.87
HSPG2-203ENST00000374695 SNW1Q13573 536 aaKnown RBP9.64□□□□□ -0.87
HSPG2-203ENST00000374695 SRRTQ9BXP5 876 aaKnown RBP9.64□□□□□ -0.87
HSPG2-203ENST00000374695 DHX37Q8IY37 1157 aaKnown RBP9.64□□□□□ -0.87
HSPG2-203ENST00000374695 NLRP2Q9NX02 1062 aa9.64□□□□□ -0.87
HSPG2-203ENST00000374695 PPP4R3BQ5MIZ7 849 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 KIF3CO14782 793 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 SELENOOQ9BVL4 669 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 NKTRP30414 1462 aaKnown RBP9.63□□□□□ -0.87
HSPG2-203ENST00000374695 CECR2Q9BXF3 1484 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 UVSSAQ2YD98 709 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 CUL5Q93034 780 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 CPSF2Q9P2I0 782 aaKnown RBP9.63□□□□□ -0.87
HSPG2-203ENST00000374695 ANKRD50Q9ULJ7 1429 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 CEP83Q9Y592 693 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 OPA1O60313 960 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 AIDAQ96BJ3 306 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 CTAGE1Q96RT6 745 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 LMAN1P49257 510 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 TMOD2Q9NZR1 351 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 CCDC77Q9BR77 488 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 MACROD2A1Z1Q3 448 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 TNNT1P13805 278 aa9.63□□□□□ -0.87
HSPG2-203ENST00000374695 GTF2F1P35269 517 aaKnown RBP eCLIP9.63□□□□□ -0.871e-8■■■■□ 20.6
HSPG2-203ENST00000374695 IPO4Q8TEX9 1081 aaKnown RBP9.63□□□□□ -0.87
HSPG2-203ENST00000374695 DDX19AQ9NUU7 478 aaKnown RBP9.62□□□□□ -0.87
HSPG2-203ENST00000374695 MKRN1Q9UHC7 482 aaKnown RBP9.62□□□□□ -0.87
HSPG2-203ENST00000374695 SLF2Q8IX21 1173 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 LRRC9Q6ZRR7 1453 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 TBC1D5Q92609 795 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 JAKMIP2Q96AA8 810 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 AKAP2Q9Y2D5 859 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 CCDC110Q8TBZ0 833 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 ADAMTS8Q9UP79 889 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 FKBP4Q02790 459 aaKnown RBP eCLIP9.62□□□□□ -0.87
HSPG2-203ENST00000374695 CEP135Q66GS9 1140 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 AKNAQ7Z591 1439 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 CEP128Q6ZU80 1094 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 C8orf76Q96K31 380 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 C16orf45Q96MC5 204 aaPredicted RBP9.62□□□□□ -0.87
HSPG2-203ENST00000374695 ARFGAP3Q9NP61 516 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 RPGRIP1LQ68CZ1 1315 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 ATF7IPQ6VMQ6 1270 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 TCP11L2Q8N4U5 519 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 ABTB2Q8N961 1025 aa9.62□□□□□ -0.87
HSPG2-203ENST00000374695 CBX1P83916 185 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 FMNL3Q8IVF7 1028 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 CTCFLQ8NI51 663 aaPredicted RBP9.61□□□□□ -0.87
HSPG2-203ENST00000374695 IGHMBP2P38935 993 aaKnown RBP9.61□□□□□ -0.87
HSPG2-203ENST00000374695 USP37Q86T82 979 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 CCDC141Q6ZP82 1450 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 ATP2A1O14983 1001 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 DNAJC21Q5F1R6 531 aaKnown RBP9.61□□□□□ -0.87
HSPG2-203ENST00000374695 STIM2Q9P246 746 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 CALML4Q96GE6 196 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 RMND1Q9NWS8 449 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 MTIF2P46199 727 aaKnown RBP9.61□□□□□ -0.87
HSPG2-203ENST00000374695 CWC27Q6UX04 472 aaKnown RBP9.61□□□□□ -0.87
HSPG2-203ENST00000374695 ZFYP08048 801 aaPredicted RBP9.61□□□□□ -0.87
HSPG2-203ENST00000374695 CCDC50Q8IVM0 306 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 MPHOSPH6Q99547 160 aaKnown RBP9.61□□□□□ -0.87
HSPG2-203ENST00000374695 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.61□□□□□ -0.872e-6■■□□□ 11.8
HSPG2-203ENST00000374695 PTPRGP23470 1445 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 TMCO5BA8MYB1 307 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 TATP17735 454 aaPredicted RBP9.61□□□□□ -0.87
HSPG2-203ENST00000374695 PIP4K2BP78356 416 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 RSRC1Q96IZ7 334 aaKnown RBP9.61□□□□□ -0.87
HSPG2-203ENST00000374695 WDHD1O75717 1129 aaPredicted RBP9.61□□□□□ -0.87
HSPG2-203ENST00000374695 KIF5BP33176 963 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 MXRA7P84157 204 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 KLHL10Q6JEL2 608 aa9.61□□□□□ -0.87
HSPG2-203ENST00000374695 SLC4A2P04920 1241 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 ANKRD30BQ9BXX2 1392 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 MAP4K4O95819 1239 aaPredicted RBP9.6□□□□□ -0.87
HSPG2-203ENST00000374695 CCDC121Q6ZUS5 278 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 CNNM3Q8NE01 707 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 RNF41Q9H4P4 317 aaPredicted RBP9.6□□□□□ -0.87
HSPG2-203ENST00000374695 DRC1Q96MC2 740 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 SARNPP82979 210 aaKnown RBP9.6□□□□□ -0.87
HSPG2-203ENST00000374695 CAMK4Q16566 473 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 PPP2R1AP30153 589 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 MAPK8IP2Q13387 824 aaPredicted RBP9.6□□□□□ -0.87
HSPG2-203ENST00000374695 C1orf115Q9H7X2 142 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 STRN4Q9NRL3 753 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 CEP126Q9P2H0 1117 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 SPG7Q9UQ90 795 aa9.6□□□□□ -0.87
HSPG2-203ENST00000374695 GLRX3O76003 335 aaKnown RBP9.6□□□□□ -0.87
HSPG2-203ENST00000374695 SLU7O95391 586 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms