RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 HDGFP51858 240 aaKnown RBP12.94□□□□□ -0.34
SMC3-201ENST00000361804 CLEC17AQ6ZS10 378 aa12.94□□□□□ -0.34
SMC3-201ENST00000361804 ORAI2Q96SN7 254 aa12.94□□□□□ -0.34
SMC3-201ENST00000361804 LMTK3Q96Q04 1460 aa12.94□□□□□ -0.34
SMC3-201ENST00000361804 NBPF6Q5VWK0 638 aa12.94□□□□□ -0.34
SMC3-201ENST00000361804 NBPF4Q96M43 638 aa12.94□□□□□ -0.34
SMC3-201ENST00000361804 PPP1R9BQ96SB3 815 aa12.94□□□□□ -0.34
SMC3-201ENST00000361804 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
SMC3-201ENST00000361804 LRRFIP2Q9Y608 721 aaKnown RBP12.94□□□□□ -0.34
SMC3-201ENST00000361804 KIF24Q5T7B8 1368 aa12.93□□□□□ -0.34
SMC3-201ENST00000361804 REC8O95072 547 aa12.93□□□□□ -0.34
SMC3-201ENST00000361804 RTF1Q92541 710 aaKnown RBP12.93□□□□□ -0.34
SMC3-201ENST00000361804 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.93□□□□□ -0.34
SMC3-201ENST00000361804 GADD45BO75293 160 aaPredicted RBP12.93□□□□□ -0.34
SMC3-201ENST00000361804 UBR2Q8IWV8 1755 aa12.93□□□□□ -0.34
SMC3-201ENST00000361804 HEG1Q9ULI3 1381 aa12.92□□□□□ -0.34
SMC3-201ENST00000361804 ZSCAN30Q86W11 494 aa12.92□□□□□ -0.34
SMC3-201ENST00000361804 EID1Q9Y6B2 187 aa12.92□□□□□ -0.34
SMC3-201ENST00000361804 ZNF445P59923 1031 aa12.92□□□□□ -0.34
SMC3-201ENST00000361804 ANP32BQ92688 251 aaKnown RBP12.92□□□□□ -0.34
SMC3-201ENST00000361804 ESYT1Q9BSJ8 1104 aa12.92□□□□□ -0.34
SMC3-201ENST00000361804 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
SMC3-201ENST00000361804 DDX54Q8TDD1 881 aaKnown RBP12.92□□□□□ -0.34
SMC3-201ENST00000361804 PAPPAQ13219 1627 aa12.92□□□□□ -0.34
SMC3-201ENST00000361804 PTPRCP08575 1304 aa12.91□□□□□ -0.34
SMC3-201ENST00000361804 ANXA1P04083 346 aa12.91□□□□□ -0.34
SMC3-201ENST00000361804 CPA1P15085 419 aa12.91□□□□□ -0.34
SMC3-201ENST00000361804 PHAXQ9H814 394 aaKnown RBP12.91□□□□□ -0.34
SMC3-201ENST00000361804 R3HCC1Q9Y3T6 440 aaKnown RBP12.91□□□□□ -0.34
SMC3-201ENST00000361804 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
SMC3-201ENST00000361804 MX1P20591 662 aa12.91□□□□□ -0.34
SMC3-201ENST00000361804 MSNP26038 577 aaKnown RBP12.91□□□□□ -0.34
SMC3-201ENST00000361804 FLIIQ13045 1269 aa12.91□□□□□ -0.34
SMC3-201ENST00000361804 C1orf167Q5SNV9 1468 aa12.91□□□□□ -0.34
SMC3-201ENST00000361804 GNAI2P04899 355 aa12.91□□□□□ -0.34
SMC3-201ENST00000361804 LRRCC1Q9C099 1032 aa12.9□□□□□ -0.34
SMC3-201ENST00000361804 HMMRO75330 724 aa12.9□□□□□ -0.34
SMC3-201ENST00000361804 CHMLP26374 656 aa12.9□□□□□ -0.34
SMC3-201ENST00000361804 AMPHP49418 695 aa12.9□□□□□ -0.34
SMC3-201ENST00000361804 JARID2Q92833 1246 aaPredicted RBP12.9□□□□□ -0.34
SMC3-201ENST00000361804 PARP4Q9UKK3 1724 aaKnown RBP12.9□□□□□ -0.34
SMC3-201ENST00000361804 KCNQ3O43525 872 aa12.9□□□□□ -0.35
SMC3-201ENST00000361804 EIF2S2P20042 333 aaKnown RBP12.89□□□□□ -0.35
SMC3-201ENST00000361804 LGR6Q9HBX8 967 aa12.89□□□□□ -0.35
SMC3-201ENST00000361804 PTMSP20962 102 aa12.89□□□□□ -0.35
SMC3-201ENST00000361804 STK31Q9BXU1 1019 aa12.89□□□□□ -0.35
SMC3-201ENST00000361804 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
SMC3-201ENST00000361804 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
SMC3-201ENST00000361804 ZNF830Q96NB3 372 aaPredicted RBP12.88□□□□□ -0.35
SMC3-201ENST00000361804 CWC22Q9HCG8 908 aaKnown RBP12.88□□□□□ -0.35
SMC3-201ENST00000361804 TJP1Q07157 1748 aa12.88□□□□□ -0.35
SMC3-201ENST00000361804 NLRP6P59044 892 aa12.87□□□□□ -0.35
SMC3-201ENST00000361804 NGDNQ8NEJ9 315 aaKnown RBP12.87□□□□□ -0.35
SMC3-201ENST00000361804 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
SMC3-201ENST00000361804 C14orf37Q86TY3 774 aa12.87□□□□□ -0.35
SMC3-201ENST00000361804 DDX17Q92841 729 aaKnown RBP12.87□□□□□ -0.35
SMC3-201ENST00000361804 USP44Q9H0E7 712 aa12.87□□□□□ -0.35
SMC3-201ENST00000361804 KDM6AO15550 1401 aaPredicted RBP12.87□□□□□ -0.35
SMC3-201ENST00000361804 PXDNLA1KZ92 1463 aa12.86□□□□□ -0.35
SMC3-201ENST00000361804 LRSAM1Q6UWE0 723 aa12.86□□□□□ -0.35
SMC3-201ENST00000361804 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
SMC3-201ENST00000361804 MAP3K5Q99683 1374 aa12.86□□□□□ -0.35
SMC3-201ENST00000361804 MEGF6O75095 1541 aa12.86□□□□□ -0.35
SMC3-201ENST00000361804 BRD1O95696 1058 aa12.86□□□□□ -0.35
SMC3-201ENST00000361804 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
SMC3-201ENST00000361804 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
SMC3-201ENST00000361804 MRC1P22897 1456 aa12.86□□□□□ -0.35
SMC3-201ENST00000361804 PRAMEF22A3QJZ6 481 aa12.86□□□□□ -0.35
SMC3-201ENST00000361804 C17orf53Q8N3J3 647 aaPredicted RBP12.86□□□□□ -0.35
SMC3-201ENST00000361804 OSBPL3Q9H4L5 887 aa12.86□□□□□ -0.35
SMC3-201ENST00000361804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
SMC3-201ENST00000361804 IBTKQ9P2D0 1353 aaPredicted RBP12.86□□□□□ -0.35
SMC3-201ENST00000361804 COL9A3Q14050 684 aaPredicted RBP12.86□□□□□ -0.35
SMC3-201ENST00000361804 FAM13BQ9NYF5 915 aa12.86□□□□□ -0.35
SMC3-201ENST00000361804 SURF6O75683 361 aaKnown RBP12.85□□□□□ -0.35
SMC3-201ENST00000361804 NBPF7P0C2Y1 421 aaPredicted RBP12.85□□□□□ -0.35
SMC3-201ENST00000361804 ARHGEF25Q86VW2 580 aa12.85□□□□□ -0.35
SMC3-201ENST00000361804 RASEFQ8IZ41 740 aa12.85□□□□□ -0.35
SMC3-201ENST00000361804 IP6K1Q92551 441 aa12.85□□□□□ -0.35
SMC3-201ENST00000361804 LAMB4A4D0S4 1761 aa12.85□□□□□ -0.35
SMC3-201ENST00000361804 TCHHQ07283 1943 aa12.85□□□□□ -0.35
SMC3-201ENST00000361804 OFD1O75665 1012 aa12.85□□□□□ -0.35
SMC3-201ENST00000361804 ATP8B2P98198 1209 aa12.85□□□□□ -0.35
SMC3-201ENST00000361804 ABTB2Q8N961 1025 aa12.85□□□□□ -0.35
SMC3-201ENST00000361804 PDLIM2Q96JY6 352 aa12.85□□□□□ -0.35
SMC3-201ENST00000361804 ABCC6O95255 1503 aa12.84□□□□□ -0.35
SMC3-201ENST00000361804 PPP1R42Q7Z4L9 355 aa12.84□□□□□ -0.35
SMC3-201ENST00000361804 USP48Q86UV5 1035 aa12.84□□□□□ -0.35
SMC3-201ENST00000361804 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
SMC3-201ENST00000361804 TSC1Q92574 1164 aa12.84□□□□□ -0.35
SMC3-201ENST00000361804 CNPY2Q9Y2B0 182 aa12.84□□□□□ -0.35
SMC3-201ENST00000361804 SOS1Q07889 1333 aaPredicted RBP12.84□□□□□ -0.35
SMC3-201ENST00000361804 ADCY9O60503 1353 aa12.83□□□□□ -0.35
SMC3-201ENST00000361804 LARGE1O95461 756 aa12.83□□□□□ -0.36
SMC3-201ENST00000361804 CWC27Q6UX04 472 aaKnown RBP12.83□□□□□ -0.36
SMC3-201ENST00000361804 RRP9O43818 475 aaKnown RBP12.83□□□□□ -0.36
SMC3-201ENST00000361804 UBTFL1P0CB47 393 aaPredicted RBP12.83□□□□□ -0.36
SMC3-201ENST00000361804 HAP1P54257 671 aaPredicted RBP12.83□□□□□ -0.36
SMC3-201ENST00000361804 NOL7Q9UMY1 257 aaKnown RBP12.83□□□□□ -0.36
SMC3-201ENST00000361804 HDGFL1Q5TGJ6 251 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms