RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 CCDC87Q9NVE4 849 aa31.58■■■□□ 2.65
ALKAL1-201ENST00000358543 QSER1Q2KHR3 1735 aa31.58■■■□□ 2.65
ALKAL1-201ENST00000358543 PNPLA7Q6ZV29 1317 aa31.57■■■□□ 2.64
ALKAL1-201ENST00000358543 GNPATO15228 680 aa31.57■■■□□ 2.64
ALKAL1-201ENST00000358543 SSFA2P28290 1259 aa31.56■■■□□ 2.64
ALKAL1-201ENST00000358543 RTCBQ9Y3I0 505 aaKnown RBP31.56■■■□□ 2.64
ALKAL1-201ENST00000358543 UBR3Q6ZT12 1888 aa31.55■■■□□ 2.64
ALKAL1-201ENST00000358543 HOXB7P09629 217 aa31.53■■■□□ 2.64
ALKAL1-201ENST00000358543 ADRA2BP18089 450 aa31.53■■■□□ 2.64
ALKAL1-201ENST00000358543 AMIGO3Q86WK7 504 aa31.53■■■□□ 2.64
ALKAL1-201ENST00000358543 TUBGCP6Q96RT7 1819 aa31.52■■■□□ 2.64
ALKAL1-201ENST00000358543 ZBTB1Q9Y2K1 713 aa31.52■■■□□ 2.64
ALKAL1-201ENST00000358543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.51■■■□□ 2.63
ALKAL1-201ENST00000358543 GOLGA2Q08379 1002 aa31.51■■■□□ 2.63
ALKAL1-201ENST00000358543 TRAPPC3LQ5T215 181 aa31.51■■■□□ 2.63
ALKAL1-201ENST00000358543 COL23A1Q86Y22 540 aaPredicted RBP31.51■■■□□ 2.63
ALKAL1-201ENST00000358543 TSR2Q969E8 191 aaKnown RBP31.51■■■□□ 2.63
ALKAL1-201ENST00000358543 MYH16Q9H6N6 1097 aa31.51■■■□□ 2.63
ALKAL1-201ENST00000358543 SPINK5Q9NQ38 1064 aaPredicted RBP31.51■■■□□ 2.63
ALKAL1-201ENST00000358543 A1BGP04217 495 aa31.5■■■□□ 2.63
ALKAL1-201ENST00000358543 KRT24Q2M2I5 525 aa31.5■■■□□ 2.63
ALKAL1-201ENST00000358543 SOS1Q07889 1333 aaPredicted RBP31.49■■■□□ 2.63
ALKAL1-201ENST00000358543 FANCIQ9NVI1 1328 aa31.49■■■□□ 2.63
ALKAL1-201ENST00000358543 LAMB4A4D0S4 1761 aa31.48■■■□□ 2.63
ALKAL1-201ENST00000358543 CANXP27824 592 aaKnown RBP31.48■■■□□ 2.63
ALKAL1-201ENST00000358543 IL6STP40189 918 aaPredicted RBP31.48■■■□□ 2.63
ALKAL1-201ENST00000358543 HNRNPUQ00839 825 aaKnown RBP eCLIP31.48■■■□□ 2.63
ALKAL1-201ENST00000358543 DUSP27Q5VZP5 1158 aa31.48■■■□□ 2.63
ALKAL1-201ENST00000358543 SLC16A10Q8TF71 515 aa31.48■■■□□ 2.63
ALKAL1-201ENST00000358543 PDGFDQ9GZP0 370 aaPredicted RBP31.48■■■□□ 2.63
ALKAL1-201ENST00000358543 PHF14O94880 888 aa31.47■■■□□ 2.63
ALKAL1-201ENST00000358543 EIF5P55010 431 aaKnown RBP31.47■■■□□ 2.63
ALKAL1-201ENST00000358543 CASZ1Q86V15 1759 aa31.47■■■□□ 2.63
ALKAL1-201ENST00000358543 ERBB4Q15303 1308 aa31.47■■■□□ 2.63
ALKAL1-201ENST00000358543 E9PSI1 815 aa31.46■■■□□ 2.63
ALKAL1-201ENST00000358543 SMIM5Q71RC9 77 aa31.46■■■□□ 2.63
ALKAL1-201ENST00000358543 ARHGEF1Q92888 912 aaKnown RBP31.46■■■□□ 2.63
ALKAL1-201ENST00000358543 C8orf58Q8NAV2 365 aa31.45■■■□□ 2.63
ALKAL1-201ENST00000358543 NBPF26B4DH59 902 aa31.43■■■□□ 2.62
ALKAL1-201ENST00000358543 EIF2S2P20042 333 aaKnown RBP31.43■■■□□ 2.62
ALKAL1-201ENST00000358543 SLFN5Q08AF3 891 aa31.43■■■□□ 2.62
ALKAL1-201ENST00000358543 NBPF10Q6P3W6 841 aaKnown RBP31.43■■■□□ 2.62
ALKAL1-201ENST00000358543 NBPF15Q8N660 670 aa31.43■■■□□ 2.62
ALKAL1-201ENST00000358543 CHMP4AQ9BY43 222 aa31.43■■■□□ 2.62
ALKAL1-201ENST00000358543 A0A087WZG4 1122 aa31.42■■■□□ 2.62
ALKAL1-201ENST00000358543 MSH5O43196 834 aa31.42■■■□□ 2.62
ALKAL1-201ENST00000358543 RFC4P35249 363 aa31.42■■■□□ 2.62
ALKAL1-201ENST00000358543 MTFR1LQ9H019 292 aa31.41■■■□□ 2.62
ALKAL1-201ENST00000358543 COL15A1P39059 1388 aa31.41■■■□□ 2.62
ALKAL1-201ENST00000358543 ELL2O00472 640 aaPredicted RBP31.4■■■□□ 2.62
ALKAL1-201ENST00000358543 TRMT2AQ8IZ69 625 aaKnown RBP31.4■■■□□ 2.62
ALKAL1-201ENST00000358543 TSPYL6Q8N831 410 aa31.4■■■□□ 2.62
ALKAL1-201ENST00000358543 HDGFL1Q5TGJ6 251 aa31.39■■■□□ 2.62
ALKAL1-201ENST00000358543 NPM2Q86SE8 214 aaKnown RBP31.39■■■□□ 2.62
ALKAL1-201ENST00000358543 PIP4K2AP48426 406 aaPredicted RBP31.38■■■□□ 2.61
ALKAL1-201ENST00000358543 EXOSC9Q06265 439 aaKnown RBP31.38■■■□□ 2.61
ALKAL1-201ENST00000358543 PDIA6Q15084 440 aa31.38■■■□□ 2.61
ALKAL1-201ENST00000358543 TWISTNBQ3B726 338 aaPredicted RBP31.38■■■□□ 2.61
ALKAL1-201ENST00000358543 CDCA7LQ96GN5 454 aa31.38■■■□□ 2.61
ALKAL1-201ENST00000358543 ZBTB7AO95365 584 aa31.37■■■□□ 2.61
ALKAL1-201ENST00000358543 NARFQ9UHQ1 456 aa31.37■■■□□ 2.61
ALKAL1-201ENST00000358543 ZBED9Q6R2W3 1325 aa31.37■■■□□ 2.61
ALKAL1-201ENST00000358543 USP42Q9H9J4 1324 aaKnown RBP31.35■■■□□ 2.61
ALKAL1-201ENST00000358543 DDX21Q9NR30 783 aaKnown RBP eCLIP31.35■■■□□ 2.61
ALKAL1-201ENST00000358543 ZNF330Q9Y3S2 320 aaPredicted RBP31.35■■■□□ 2.61
ALKAL1-201ENST00000358543 C4AP0C0L4 1744 aa31.35■■■□□ 2.61
ALKAL1-201ENST00000358543 ZPR1O75312 459 aa31.34■■■□□ 2.61
ALKAL1-201ENST00000358543 NECTIN2Q92692 538 aa31.34■■■□□ 2.61
ALKAL1-201ENST00000358543 SPON1Q9HCB6 807 aa31.34■■■□□ 2.61
ALKAL1-201ENST00000358543 DBF4Q9UBU7 674 aaPredicted RBP31.34■■■□□ 2.61
ALKAL1-201ENST00000358543 VAMP4O75379 141 aa31.33■■■□□ 2.61
ALKAL1-201ENST00000358543 CCDC30Q5VVM6 783 aa31.33■■■□□ 2.61
ALKAL1-201ENST00000358543 LRP10Q7Z4F1 713 aa31.33■■■□□ 2.61
ALKAL1-201ENST00000358543 GYS1P13807 737 aa31.32■■■□□ 2.6
ALKAL1-201ENST00000358543 MYL6BP14649 208 aa31.32■■■□□ 2.6
ALKAL1-201ENST00000358543 NLGN1Q8N2Q7 840 aa31.32■■■□□ 2.6
ALKAL1-201ENST00000358543 CHPF2Q9P2E5 772 aa31.32■■■□□ 2.6
ALKAL1-201ENST00000358543 DZIP3Q86Y13 1208 aaKnown RBP31.31■■■□□ 2.6
ALKAL1-201ENST00000358543 SRP68Q9UHB9 627 aaKnown RBP31.31■■■□□ 2.6
ALKAL1-201ENST00000358543 TBC1D2BQ9UPU7 963 aa31.31■■■□□ 2.6
ALKAL1-201ENST00000358543 ATF5Q9Y2D1 282 aaPredicted RBP31.31■■■□□ 2.6
ALKAL1-201ENST00000358543 PROSER3Q2NL68 480 aa31.3■■■□□ 2.6
ALKAL1-201ENST00000358543 COL24A1Q17RW2 1714 aa31.29■■■□□ 2.6
ALKAL1-201ENST00000358543 RGL2O15211 777 aa31.29■■■□□ 2.6
ALKAL1-201ENST00000358543 USPL1Q5W0Q7 1092 aa31.29■■■□□ 2.6
ALKAL1-201ENST00000358543 HYPKQ9NX55 129 aa31.29■■■□□ 2.6
ALKAL1-201ENST00000358543 PTGER2P43116 358 aa31.28■■■□□ 2.6
ALKAL1-201ENST00000358543 SGIP1Q9BQI5 828 aa31.28■■■□□ 2.6
ALKAL1-201ENST00000358543 CAMTA2O94983 1202 aa31.27■■■□□ 2.6
ALKAL1-201ENST00000358543 ANXA1P04083 346 aa31.27■■■□□ 2.6
ALKAL1-201ENST00000358543 ARXQ96QS3 562 aa31.27■■■□□ 2.6
ALKAL1-201ENST00000358543 BCL2L12Q9HB09 334 aa31.27■■■□□ 2.6
ALKAL1-201ENST00000358543 POLD1P28340 1107 aa31.25■■■□□ 2.59
ALKAL1-201ENST00000358543 FKBP8Q14318 412 aa31.25■■■□□ 2.59
ALKAL1-201ENST00000358543 MSL1Q68DK7 614 aa31.25■■■□□ 2.59
ALKAL1-201ENST00000358543 CLEC4GQ6UXB4 293 aa31.25■■■□□ 2.59
ALKAL1-201ENST00000358543 ERVV-1B6SEH8 477 aa31.24■■■□□ 2.59
ALKAL1-201ENST00000358543 TTLL7Q6ZT98 887 aa31.24■■■□□ 2.59
ALKAL1-201ENST00000358543 STK31Q9BXU1 1019 aa31.24■■■□□ 2.59
ALKAL1-201ENST00000358543 CT47B1P0C2W7 299 aaPredicted RBP31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms