RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 NOM1Q5C9Z4 860 aaKnown RBP20.01■□□□□ 0.79
TRAPPC11-201ENST00000334690 STK11IPQ8N1F8 1099 aa20.01■□□□□ 0.79
TRAPPC11-201ENST00000334690 C8orf76Q96K31 380 aa20.01■□□□□ 0.79
TRAPPC11-201ENST00000334690 CAMK4Q16566 473 aa20.01■□□□□ 0.79
TRAPPC11-201ENST00000334690 MRPL50Q8N5N7 158 aaKnown RBP20.01■□□□□ 0.79
TRAPPC11-201ENST00000334690 TMOD3Q9NYL9 352 aa20.01■□□□□ 0.79
TRAPPC11-201ENST00000334690 CWC15Q9P013 229 aaKnown RBP20.01■□□□□ 0.79
TRAPPC11-201ENST00000334690 SNX21Q969T3 373 aa20■□□□□ 0.79
TRAPPC11-201ENST00000334690 KIAA0556O60303 1618 aa20■□□□□ 0.79
TRAPPC11-201ENST00000334690 NPC1L1Q9UHC9 1359 aa20■□□□□ 0.79
TRAPPC11-201ENST00000334690 HSP90AB3PQ58FF7 597 aa20■□□□□ 0.79
TRAPPC11-201ENST00000334690 RHPN1Q8TCX5 695 aa20■□□□□ 0.79
TRAPPC11-201ENST00000334690 POLKQ9UBT6 870 aa20■□□□□ 0.79
TRAPPC11-201ENST00000334690 ANAPC15P60006 121 aa20■□□□□ 0.79
TRAPPC11-201ENST00000334690 MAP3K2Q9Y2U5 619 aa20■□□□□ 0.79
TRAPPC11-201ENST00000334690 UHRF1BP1Q6BDS2 1440 aa20■□□□□ 0.79
TRAPPC11-201ENST00000334690 SMC5Q8IY18 1101 aa20■□□□□ 0.79
TRAPPC11-201ENST00000334690 TRAPPC8Q9Y2L5 1435 aa20■□□□□ 0.79
TRAPPC11-201ENST00000334690 PDE1AP54750 535 aa19.99■□□□□ 0.79
TRAPPC11-201ENST00000334690 TXLNBQ8N3L3 684 aa19.99■□□□□ 0.79
TRAPPC11-201ENST00000334690 CARD14Q9BXL6 1004 aa19.99■□□□□ 0.79
TRAPPC11-201ENST00000334690 ZNF518AQ6AHZ1 1483 aa19.99■□□□□ 0.79
TRAPPC11-201ENST00000334690 FBLN1P23142 703 aa19.99■□□□□ 0.79
TRAPPC11-201ENST00000334690 SFPQP23246 707 aaKnown RBP eCLIP19.99■□□□□ 0.79
TRAPPC11-201ENST00000334690 CFAP100Q494V2 611 aa19.99■□□□□ 0.79
TRAPPC11-201ENST00000334690 ANO8Q9HCE9 1232 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC11-201ENST00000334690 HMG20BQ9P0W2 317 aa19.99■□□□□ 0.79
TRAPPC11-201ENST00000334690 ABCF2Q9UG63 623 aa19.99■□□□□ 0.79
TRAPPC11-201ENST00000334690 MYO6Q9UM54 1294 aa19.99■□□□□ 0.79
TRAPPC11-201ENST00000334690 PZPP20742 1482 aa19.99■□□□□ 0.79
TRAPPC11-201ENST00000334690 NAPBQ9H115 298 aa19.98■□□□□ 0.79
TRAPPC11-201ENST00000334690 MCM5P33992 734 aa19.98■□□□□ 0.79
TRAPPC11-201ENST00000334690 C8orf58Q8NAV2 365 aa19.98■□□□□ 0.79
TRAPPC11-201ENST00000334690 ODF2Q5BJF6 829 aa19.97■□□□□ 0.79
TRAPPC11-201ENST00000334690 IFNL2Q8IZJ0 200 aa19.97■□□□□ 0.79
TRAPPC11-201ENST00000334690 ERLIN1O75477 346 aa19.97■□□□□ 0.79
TRAPPC11-201ENST00000334690 RLBP1P12271 317 aa19.97■□□□□ 0.79
TRAPPC11-201ENST00000334690 MAP3K12Q12852 859 aa19.97■□□□□ 0.79
TRAPPC11-201ENST00000334690 COL17A1Q9UMD9 1497 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC11-201ENST00000334690 TMX3Q96JJ7 454 aa19.97■□□□□ 0.79
TRAPPC11-201ENST00000334690 ZNF213O14771 459 aa19.97■□□□□ 0.79
TRAPPC11-201ENST00000334690 CEBPAP49715 358 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC11-201ENST00000334690 VAMP4O75379 141 aa19.96■□□□□ 0.79
TRAPPC11-201ENST00000334690 UBE2HP62256 183 aa19.96■□□□□ 0.79
TRAPPC11-201ENST00000334690 PDCL2Q8N4E4 241 aa19.96■□□□□ 0.79
TRAPPC11-201ENST00000334690 BMP2KQ9NSY1 1161 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC11-201ENST00000334690 ZNF652Q9Y2D9 606 aa19.96■□□□□ 0.79
TRAPPC11-201ENST00000334690 CAVIN2O95810 425 aa19.96■□□□□ 0.79
TRAPPC11-201ENST00000334690 ZBTB40Q9NUA8 1239 aa19.96■□□□□ 0.79
TRAPPC11-201ENST00000334690 TNRQ92752 1358 aa19.96■□□□□ 0.79
TRAPPC11-201ENST00000334690 USP25Q9UHP3 1055 aa19.96■□□□□ 0.79
TRAPPC11-201ENST00000334690 ADAMTS12P58397 1594 aa19.95■□□□□ 0.78
TRAPPC11-201ENST00000334690 GJB2P29033 226 aa19.95■□□□□ 0.78
TRAPPC11-201ENST00000334690 DEF6Q9H4E7 631 aa19.95■□□□□ 0.78
TRAPPC11-201ENST00000334690 ASXL2Q76L83 1435 aa19.95■□□□□ 0.78
TRAPPC11-201ENST00000334690 DCTPP1Q9H773 170 aa19.95■□□□□ 0.78
TRAPPC11-201ENST00000334690 GDPD2Q9HCC8 539 aa19.95■□□□□ 0.78
TRAPPC11-201ENST00000334690 UHRF1BP1LA0JNW5 1464 aa19.95■□□□□ 0.78
TRAPPC11-201ENST00000334690 ATP2B2Q01814 1243 aa19.95■□□□□ 0.78
TRAPPC11-201ENST00000334690 FAM177A1Q8N128 213 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC11-201ENST00000334690 ATP8B2P98198 1209 aa19.94■□□□□ 0.78
TRAPPC11-201ENST00000334690 PTPN14Q15678 1187 aa19.94■□□□□ 0.78
TRAPPC11-201ENST00000334690 TSHZ3Q63HK5 1081 aa19.94■□□□□ 0.78
TRAPPC11-201ENST00000334690 PPIP5K1Q6PFW1 1433 aa19.94■□□□□ 0.78
TRAPPC11-201ENST00000334690 UBE3BQ7Z3V4 1068 aa19.94■□□□□ 0.78
TRAPPC11-201ENST00000334690 ALDH1L1O75891 902 aa19.93■□□□□ 0.78
TRAPPC11-201ENST00000334690 UBXN4Q92575 508 aa19.93■□□□□ 0.78
TRAPPC11-201ENST00000334690 ESYT1Q9BSJ8 1104 aa19.93■□□□□ 0.78
TRAPPC11-201ENST00000334690 SPINK5Q9NQ38 1064 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC11-201ENST00000334690 EIF4A2Q14240 407 aaKnown RBP19.93■□□□□ 0.78
TRAPPC11-201ENST00000334690 UVSSAQ2YD98 709 aa19.93■□□□□ 0.78
TRAPPC11-201ENST00000334690 RNF41Q9H4P4 317 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC11-201ENST00000334690 ZNF287Q9HBT7 754 aa19.93■□□□□ 0.78
TRAPPC11-201ENST00000334690 DNMT1P26358 1616 aaKnown RBP19.93■□□□□ 0.78
TRAPPC11-201ENST00000334690 NEK1Q96PY6 1258 aa19.93■□□□□ 0.78
TRAPPC11-201ENST00000334690 TEX13AQ9BXU3 409 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC11-201ENST00000334690 ABCC10Q5T3U5 1492 aa19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 NEMFO60524 1076 aa19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 SNRPA1P09661 255 aaKnown RBP19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 CAVIN4Q5BKX8 364 aa19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 KRT28Q7Z3Y7 464 aa19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 ZFYVE9O95405 1425 aa19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 EPB41L2O43491 1005 aaKnown RBP19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 EIF3JO75822 258 aaKnown RBP19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 CKAP2LQ8IYA6 745 aa19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 INSRP06213 1382 aa19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 ANKRD18BA2A2Z9 1011 aa19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 ARHGAP29Q52LW3 1261 aa19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 TFIP11Q9UBB9 837 aaKnown RBP19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 TRMT112Q9UI30 125 aaKnown RBP19.92■□□□□ 0.78
TRAPPC11-201ENST00000334690 ADGRL2O95490 1459 aa19.91■□□□□ 0.78
TRAPPC11-201ENST00000334690 WDR7Q9Y4E6 1490 aa19.91■□□□□ 0.78
TRAPPC11-201ENST00000334690 KIF18AQ8NI77 898 aa19.91■□□□□ 0.78
TRAPPC11-201ENST00000334690 CWC25Q9NXE8 425 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC11-201ENST00000334690 GOLGA8BA8MQT2 603 aa19.91■□□□□ 0.78
TRAPPC11-201ENST00000334690 ANKRD13DQ6ZTN6 518 aa19.91■□□□□ 0.78
TRAPPC11-201ENST00000334690 PHAXQ9H814 394 aaKnown RBP19.91■□□□□ 0.78
TRAPPC11-201ENST00000334690 GOLIM4O00461 696 aa19.91■□□□□ 0.78
TRAPPC11-201ENST00000334690 AXDND1Q5T1B0 1012 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC11-201ENST00000334690 LEKR1Q6ZMV7 388 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms