RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 SMTNL1A8MU46 457 aa5.8□□□□□ -1.48
RLIM-201ENST00000332687 LRSAM1Q6UWE0 723 aa5.8□□□□□ -1.48
RLIM-201ENST00000332687 CCDC191Q8NCU4 936 aa5.8□□□□□ -1.48
RLIM-201ENST00000332687 GOLGA6L7A0A1B0GV03 622 aa5.8□□□□□ -1.48
RLIM-201ENST00000332687 MTERF4Q7Z6M4 381 aaKnown RBP5.8□□□□□ -1.48
RLIM-201ENST00000332687 NUTM2GQ5VZR2 741 aa5.8□□□□□ -1.48
RLIM-201ENST00000332687 WDR33Q9C0J8 1336 aaKnown RBP5.79□□□□□ -1.48
RLIM-201ENST00000332687 ANKRD36BQ8N2N9 1353 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 DKC1O60832 514 aaKnown RBP eCLIP5.79□□□□□ -1.48
RLIM-201ENST00000332687 BAG6P46379 1132 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 HMGN5P82970 282 aaKnown RBP5.79□□□□□ -1.48
RLIM-201ENST00000332687 PPFIBP1Q86W92 1011 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 HOMER2Q9NSB8 354 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 SCAF11Q99590 1463 aaKnown RBP5.79□□□□□ -1.48
RLIM-201ENST00000332687 PBRM1Q86U86 1689 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 SLC4A2P04920 1241 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 TMEM132EQ6IEE7 984 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 BLOC1S2Q6QNY1 142 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 CCDC91Q7Z6B0 441 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 CATIPQ7Z7H3 387 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 NECTIN2Q92692 538 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 NLRP3Q96P20 1036 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 CRNKL1Q9BZJ0 848 aaKnown RBP5.79□□□□□ -1.48
RLIM-201ENST00000332687 NAPBQ9H115 298 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 TTC12Q9H892 705 aaPredicted RBP5.79□□□□□ -1.48
RLIM-201ENST00000332687 PLCH2O75038 1416 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 ASXL2Q76L83 1435 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 CWC25Q9NXE8 425 aaPredicted RBP5.79□□□□□ -1.48
RLIM-201ENST00000332687 SNRPA1P09661 255 aaKnown RBP5.79□□□□□ -1.48
RLIM-201ENST00000332687 MCM3P25205 808 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 PDE4CQ08493 712 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 CCDC117Q8IWD4 279 aaPredicted RBP5.79□□□□□ -1.48
RLIM-201ENST00000332687 VIMP08670 466 aaKnown RBP5.79□□□□□ -1.48
RLIM-201ENST00000332687 TCP11L2Q8N4U5 519 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 MNS1Q8NEH6 495 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 DDB1Q16531 1140 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 KANK3Q6NY19 840 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 PLVAPQ9BX97 442 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 SSX2IPQ9Y2D8 614 aa5.79□□□□□ -1.48
RLIM-201ENST00000332687 RTCBQ9Y3I0 505 aaKnown RBP5.79□□□□□ -1.48
RLIM-201ENST00000332687 GNAT2P19087 354 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 KRT85P78386 507 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 TPTE2Q6XPS3 522 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 URB2Q14146 1524 aaKnown RBP5.78□□□□□ -1.48
RLIM-201ENST00000332687 MSANTD4Q8NCY6 345 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 RALGAPBQ86X10 1494 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 C6orf229H3BNL8 230 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 STAMBPO95630 424 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 NBPF6Q5VWK0 638 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 NBPF5PQ86XG9 351 aaPredicted RBP5.78□□□□□ -1.48
RLIM-201ENST00000332687 FAM114A1Q8IWE2 563 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 NBPF4Q96M43 638 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 TRMT112Q9UI30 125 aaKnown RBP5.78□□□□□ -1.48
RLIM-201ENST00000332687 NSD3Q9BZ95 1437 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 ZBTB24O43167 697 aaPredicted RBP5.78□□□□□ -1.48
RLIM-201ENST00000332687 ADAMTS2O95450 1211 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 ANAPC15P60006 121 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 COG6Q9Y2V7 657 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 IL16Q14005 1332 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 NOL8Q76FK4 1167 aaKnown RBP5.78□□□□□ -1.48
RLIM-201ENST00000332687 CCAR2Q8N163 923 aaKnown RBP5.78□□□□□ -1.48
RLIM-201ENST00000332687 CNNM2Q9H8M5 875 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 NEO1Q92859 1461 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 PIK3R4Q99570 1358 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 ZNF772Q68DY9 489 aaPredicted RBP5.78□□□□□ -1.48
RLIM-201ENST00000332687 SH2B1Q9NRF2 756 aaPredicted RBP5.78□□□□□ -1.48
RLIM-201ENST00000332687 BABAM1Q9NWV8 329 aa5.78□□□□□ -1.48
RLIM-201ENST00000332687 NOC2LQ9Y3T9 749 aaKnown RBP5.78□□□□□ -1.48
RLIM-201ENST00000332687 YEATS2Q9ULM3 1422 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 FAM177BA6PVY3 158 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 PPP2R1AP30153 589 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 SNX16P57768 344 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 CCDC148Q8NFR7 591 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 ZCRB1Q8TBF4 217 aaKnown RBP5.77□□□□□ -1.49
RLIM-201ENST00000332687 SREK1Q8WXA9 508 aaKnown RBP5.77□□□□□ -1.49
RLIM-201ENST00000332687 LPXNO60711 386 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 SLC4A3P48751 1232 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 NEFHP12036 1026 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 EIF6P56537 245 aaKnown RBP5.77□□□□□ -1.49
RLIM-201ENST00000332687 FKBP4Q02790 459 aaKnown RBP eCLIP5.77□□□□□ -1.49
RLIM-201ENST00000332687 FKBP15Q5T1M5 1219 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 TAOK3Q9H2K8 898 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 CWC15Q9P013 229 aaKnown RBP5.77□□□□□ -1.49
RLIM-201ENST00000332687 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.77□□□□□ -1.492e-7■□□□□ 10
RLIM-201ENST00000332687 PCF11O94913 1555 aaKnown RBP5.77□□□□□ -1.49
RLIM-201ENST00000332687 UGGT2Q9NYU1 1516 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 MYL6BP14649 208 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 PABPC4Q13310 644 aaKnown RBP eCLIP5.77□□□□□ -1.49
RLIM-201ENST00000332687 CALML4Q96GE6 196 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 CLEC11AQ9Y240 323 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 CCDC171Q6TFL3 1326 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 ATP10AO60312 1499 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 KIF2AO00139 706 aaPredicted RBP5.77□□□□□ -1.49
RLIM-201ENST00000332687 CCDC96Q2M329 555 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 HACE1Q8IYU2 909 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 SPRYD3Q8NCJ5 442 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 HMG20BQ9P0W2 317 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 CTAGE5O15320 804 aa5.77□□□□□ -1.49
RLIM-201ENST00000332687 AXDND1Q5T1B0 1012 aaPredicted RBP5.77□□□□□ -1.49
RLIM-201ENST00000332687 OTUD7BQ6GQQ9 843 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 1131.2 ms