RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 NBPF20Q3BBV1 942 aa12.45□□□□□ -0.42
SF3B2-201ENST00000322535 KRT28Q7Z3Y7 464 aa12.45□□□□□ -0.42
SF3B2-201ENST00000322535 ADGRB2O60241 1585 aa12.45□□□□□ -0.42
SF3B2-201ENST00000322535 PRPF40AO75400 957 aaKnown RBP12.45□□□□□ -0.42
SF3B2-201ENST00000322535 TERF2Q15554 542 aa12.45□□□□□ -0.42
SF3B2-201ENST00000322535 FOXD4L5Q5VV16 416 aaPredicted RBP12.45□□□□□ -0.42
SF3B2-201ENST00000322535 FOXD4L4Q8WXT5 416 aaPredicted RBP12.45□□□□□ -0.42
SF3B2-201ENST00000322535 CHAMP1Q96JM3 812 aa12.45□□□□□ -0.42
SF3B2-201ENST00000322535 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
SF3B2-201ENST00000322535 OGFRQ9NZT2 677 aa12.45□□□□□ -0.42
SF3B2-201ENST00000322535 DDIT3P35638 169 aa12.44□□□□□ -0.42
SF3B2-201ENST00000322535 GYS2P54840 703 aa12.44□□□□□ -0.42
SF3B2-201ENST00000322535 HSP90AB3PQ58FF7 597 aa12.44□□□□□ -0.42
SF3B2-201ENST00000322535 TTC12Q9H892 705 aaPredicted RBP12.44□□□□□ -0.42
SF3B2-201ENST00000322535 NOLC1Q14978 699 aaKnown RBP eCLIP12.44□□□□□ -0.42
SF3B2-201ENST00000322535 PRIMPOLQ96LW4 560 aa12.44□□□□□ -0.42
SF3B2-201ENST00000322535 TRIM35Q9UPQ4 493 aa12.44□□□□□ -0.42
SF3B2-201ENST00000322535 VIRMAQ69YN4 1812 aaKnown RBP12.44□□□□□ -0.42
SF3B2-201ENST00000322535 COL3A1P02461 1466 aaPredicted RBP12.44□□□□□ -0.42
SF3B2-201ENST00000322535 STRCP1A6NGW2 1772 aa12.44□□□□□ -0.42
SF3B2-201ENST00000322535 SMC5Q8IY18 1101 aa12.44□□□□□ -0.42
SF3B2-201ENST00000322535 SGSM3Q96HU1 749 aa12.44□□□□□ -0.42
SF3B2-201ENST00000322535 MON2Q7Z3U7 1717 aa12.43□□□□□ -0.42
SF3B2-201ENST00000322535 ZNF445P59923 1031 aa12.43□□□□□ -0.42
SF3B2-201ENST00000322535 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
SF3B2-201ENST00000322535 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
SF3B2-201ENST00000322535 PNPLA6Q8IY17 1366 aa12.43□□□□□ -0.42
SF3B2-201ENST00000322535 CEP120Q8N960 986 aa12.43□□□□□ -0.42
SF3B2-201ENST00000322535 LRRC59Q96AG4 307 aaKnown RBP12.43□□□□□ -0.42
SF3B2-201ENST00000322535 CIZ1Q9ULV3 898 aaPredicted RBP12.43□□□□□ -0.42
SF3B2-201ENST00000322535 SSH2Q76I76 1423 aa12.43□□□□□ -0.42
SF3B2-201ENST00000322535 GAS2L2Q8NHY3 880 aa12.42□□□□□ -0.42
SF3B2-201ENST00000322535 OVOS2A0A0J9YW53 1432 aa12.42□□□□□ -0.42
SF3B2-201ENST00000322535 OVOS2Q6IE36 1432 aa12.42□□□□□ -0.42
SF3B2-201ENST00000322535 FEZ1Q99689 392 aa12.42□□□□□ -0.42
SF3B2-201ENST00000322535 TOPAZ1Q8N9V7 1692 aa12.42□□□□□ -0.42
SF3B2-201ENST00000322535 RAD51AP2Q09MP3 1159 aa12.41□□□□□ -0.42
SF3B2-201ENST00000322535 TTC21AQ8NDW8 1320 aa12.41□□□□□ -0.42
SF3B2-201ENST00000322535 MAP2K1Q02750 393 aaPredicted RBP12.41□□□□□ -0.42
SF3B2-201ENST00000322535 CHRNA2Q15822 529 aa12.41□□□□□ -0.42
SF3B2-201ENST00000322535 MCM10Q7L590 875 aa12.41□□□□□ -0.42
SF3B2-201ENST00000322535 EYA1Q99502 592 aa12.41□□□□□ -0.42
SF3B2-201ENST00000322535 MIS18AQ9NYP9 233 aa12.41□□□□□ -0.42
SF3B2-201ENST00000322535 FMN2Q9NZ56 1722 aa12.41□□□□□ -0.42
SF3B2-201ENST00000322535 RIOK3O14730 519 aaKnown RBP12.41□□□□□ -0.42
SF3B2-201ENST00000322535 FCHSD2O94868 740 aa12.41□□□□□ -0.42
SF3B2-201ENST00000322535 ICE2Q659A1 982 aa12.41□□□□□ -0.42
SF3B2-201ENST00000322535 RWDD1Q9H446 243 aaPredicted RBP12.41□□□□□ -0.42
SF3B2-201ENST00000322535 HOXC9P31274 260 aa12.4□□□□□ -0.42
SF3B2-201ENST00000322535 HNRNPH2P55795 449 aaKnown RBP12.4□□□□□ -0.42
SF3B2-201ENST00000322535 ANKRD26Q9UPS8 1709 aa12.4□□□□□ -0.42
SF3B2-201ENST00000322535 GCP02774 474 aa12.4□□□□□ -0.42
SF3B2-201ENST00000322535 ANKRD7Q92527 254 aa12.4□□□□□ -0.42
SF3B2-201ENST00000322535 C1orf167Q5SNV9 1468 aa12.4□□□□□ -0.42
SF3B2-201ENST00000322535 RLBP1P12271 317 aa12.39□□□□□ -0.43
SF3B2-201ENST00000322535 RBM25P49756 843 aaKnown RBP12.39□□□□□ -0.43
SF3B2-201ENST00000322535 CHAF1AQ13111 956 aaPredicted RBP12.39□□□□□ -0.43
SF3B2-201ENST00000322535 PKP1Q13835 747 aa12.39□□□□□ -0.43
SF3B2-201ENST00000322535 FAM212AQ96EL1 285 aa12.39□□□□□ -0.43
SF3B2-201ENST00000322535 AXIN2Q9Y2T1 843 aa12.39□□□□□ -0.43
SF3B2-201ENST00000322535 ANKARQ7Z5J8 1434 aa12.39□□□□□ -0.43
SF3B2-201ENST00000322535 PIK3C2AO00443 1686 aa12.39□□□□□ -0.43
SF3B2-201ENST00000322535 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
SF3B2-201ENST00000322535 EXOSC9Q06265 439 aaKnown RBP12.38□□□□□ -0.43
SF3B2-201ENST00000322535 PRDM16Q9HAZ2 1276 aa12.38□□□□□ -0.43
SF3B2-201ENST00000322535 LRRC7Q96NW7 1537 aa12.38□□□□□ -0.43
SF3B2-201ENST00000322535 STRCQ7RTU9 1775 aa12.38□□□□□ -0.43
SF3B2-201ENST00000322535 AK9Q5TCS8 1911 aa12.38□□□□□ -0.43
SF3B2-201ENST00000322535 K7ELQ4 463 aaPredicted RBP12.38□□□□□ -0.43
SF3B2-201ENST00000322535 PDE3AQ14432 1141 aa12.38□□□□□ -0.43
SF3B2-201ENST00000322535 KRT24Q2M2I5 525 aa12.38□□□□□ -0.43
SF3B2-201ENST00000322535 CADPS2Q86UW7 1296 aa12.38□□□□□ -0.43
SF3B2-201ENST00000322535 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
SF3B2-201ENST00000322535 MSH6P52701 1360 aa12.38□□□□□ -0.43
SF3B2-201ENST00000322535 NRKQ7Z2Y5 1582 aa12.38□□□□□ -0.43
SF3B2-201ENST00000322535 LMBRD1Q9NUN5 540 aa12.38□□□□□ -0.43
SF3B2-201ENST00000322535 PEAK1Q9H792 1746 aa12.37□□□□□ -0.43
SF3B2-201ENST00000322535 GUCY2CP25092 1073 aa12.37□□□□□ -0.43
SF3B2-201ENST00000322535 GPT2Q8TD30 523 aa12.37□□□□□ -0.43
SF3B2-201ENST00000322535 BORCS6Q96GS4 357 aa12.37□□□□□ -0.43
SF3B2-201ENST00000322535 TMEM63CQ9P1W3 806 aa12.37□□□□□ -0.43
SF3B2-201ENST00000322535 SLAIN2Q9P270 581 aa12.37□□□□□ -0.43
SF3B2-201ENST00000322535 NSFL1CQ9UNZ2 370 aaKnown RBP12.37□□□□□ -0.43
SF3B2-201ENST00000322535 NAA30Q147X3 362 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-201ENST00000322535 FOXD4L6Q3SYB3 417 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-201ENST00000322535 FOXD4L3Q6VB84 417 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-201ENST00000322535 BRINP3Q76B58 766 aa12.37□□□□□ -0.43
SF3B2-201ENST00000322535 PIBF1Q8WXW3 757 aa12.37□□□□□ -0.43
SF3B2-201ENST00000322535 IBTKQ9P2D0 1353 aaPredicted RBP12.36□□□□□ -0.43
SF3B2-201ENST00000322535 NBPF6Q5VWK0 638 aa12.36□□□□□ -0.43
SF3B2-201ENST00000322535 LRSAM1Q6UWE0 723 aa12.36□□□□□ -0.43
SF3B2-201ENST00000322535 TRMT2AQ8IZ69 625 aaKnown RBP12.36□□□□□ -0.43
SF3B2-201ENST00000322535 NBPF4Q96M43 638 aa12.36□□□□□ -0.43
SF3B2-201ENST00000322535 IQSEC2Q5JU85 1478 aa12.36□□□□□ -0.43
SF3B2-201ENST00000322535 NFE2L2Q16236 605 aa12.36□□□□□ -0.43
SF3B2-201ENST00000322535 MTHFSDQ2M296 383 aaKnown RBP12.36□□□□□ -0.43
SF3B2-201ENST00000322535 SNX21Q969T3 373 aa12.36□□□□□ -0.43
SF3B2-201ENST00000322535 CTNNA3Q9UI47 895 aa12.36□□□□□ -0.43
SF3B2-201ENST00000322535 USP31Q70CQ4 1352 aa12.36□□□□□ -0.43
SF3B2-201ENST00000322535 SART3Q15020 963 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms