RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 WDR63Q8IWG1 891 aa28.83■■■□□ 2.21
SNUPN-201ENST00000308588 STARD3NLO95772 234 aa28.82■■■□□ 2.2
SNUPN-201ENST00000308588 IL16Q14005 1332 aa28.82■■■□□ 2.2
SNUPN-201ENST00000308588 QSER1Q2KHR3 1735 aa28.82■■■□□ 2.2
SNUPN-201ENST00000308588 UBR3Q6ZT12 1888 aa28.81■■■□□ 2.2
SNUPN-201ENST00000308588 CCDC87Q9NVE4 849 aa28.81■■■□□ 2.2
SNUPN-201ENST00000308588 RPS6KA4O75676 772 aa28.8■■■□□ 2.2
SNUPN-201ENST00000308588 ZNF521Q96K83 1311 aa28.8■■■□□ 2.2
SNUPN-201ENST00000308588 COL23A1Q86Y22 540 aaPredicted RBP28.79■■■□□ 2.2
SNUPN-201ENST00000308588 RTCBQ9Y3I0 505 aaKnown RBP28.79■■■□□ 2.2
SNUPN-201ENST00000308588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.79■■■□□ 2.2
SNUPN-201ENST00000308588 SSFA2P28290 1259 aa28.79■■■□□ 2.2
SNUPN-201ENST00000308588 KRT24Q2M2I5 525 aa28.79■■■□□ 2.2
SNUPN-201ENST00000308588 ZBTB1Q9Y2K1 713 aa28.79■■■□□ 2.2
SNUPN-201ENST00000308588 CASZ1Q86V15 1759 aa28.78■■■□□ 2.2
SNUPN-201ENST00000308588 PHF14O94880 888 aa28.78■■■□□ 2.2
SNUPN-201ENST00000308588 FLAD1Q8NFF5 587 aa28.77■■■□□ 2.2
SNUPN-201ENST00000308588 A1BGP04217 495 aa28.76■■■□□ 2.19
SNUPN-201ENST00000308588 SPINK5Q9NQ38 1064 aaPredicted RBP28.75■■■□□ 2.19
SNUPN-201ENST00000308588 TSR2Q969E8 191 aaKnown RBP28.74■■■□□ 2.19
SNUPN-201ENST00000308588 SOS1Q07889 1333 aaPredicted RBP28.74■■■□□ 2.19
SNUPN-201ENST00000308588 CANXP27824 592 aaKnown RBP28.74■■■□□ 2.19
SNUPN-201ENST00000308588 TRAPPC3LQ5T215 181 aa28.74■■■□□ 2.19
SNUPN-201ENST00000308588 ADRA2BP18089 450 aa28.73■■■□□ 2.19
SNUPN-201ENST00000308588 ARHGEF1Q92888 912 aaKnown RBP28.73■■■□□ 2.19
SNUPN-201ENST00000308588 MSH5O43196 834 aa28.72■■■□□ 2.19
SNUPN-201ENST00000308588 LAMB4A4D0S4 1761 aa28.71■■■□□ 2.19
SNUPN-201ENST00000308588 ZBTB7AO95365 584 aa28.7■■■□□ 2.19
SNUPN-201ENST00000308588 PIP4K2AP48426 406 aaPredicted RBP28.7■■■□□ 2.19
SNUPN-201ENST00000308588 EIF5P55010 431 aaKnown RBP28.7■■■□□ 2.19
SNUPN-201ENST00000308588 SLC16A10Q8TF71 515 aa28.7■■■□□ 2.19
SNUPN-201ENST00000308588 NBPF26B4DH59 902 aa28.69■■■□□ 2.18
SNUPN-201ENST00000308588 DUSP27Q5VZP5 1158 aa28.69■■■□□ 2.18
SNUPN-201ENST00000308588 NBPF10Q6P3W6 841 aaKnown RBP28.69■■■□□ 2.18
SNUPN-201ENST00000308588 NBPF15Q8N660 670 aa28.69■■■□□ 2.18
SNUPN-201ENST00000308588 FANCIQ9NVI1 1328 aa28.69■■■□□ 2.18
SNUPN-201ENST00000308588 IL6STP40189 918 aaPredicted RBP28.69■■■□□ 2.18
SNUPN-201ENST00000308588 C8orf58Q8NAV2 365 aa28.69■■■□□ 2.18
SNUPN-201ENST00000308588 HOXB7P09629 217 aa28.68■■■□□ 2.18
SNUPN-201ENST00000308588 EIF2S2P20042 333 aaKnown RBP28.68■■■□□ 2.18
SNUPN-201ENST00000308588 MTFR1LQ9H019 292 aa28.68■■■□□ 2.18
SNUPN-201ENST00000308588 COL15A1P39059 1388 aa28.67■■■□□ 2.18
SNUPN-201ENST00000308588 GOLGA2Q08379 1002 aa28.67■■■□□ 2.18
SNUPN-201ENST00000308588 ELL2O00472 640 aaPredicted RBP28.66■■■□□ 2.18
SNUPN-201ENST00000308588 RFC4P35249 363 aa28.66■■■□□ 2.18
SNUPN-201ENST00000308588 HNRNPUQ00839 825 aaKnown RBP eCLIP28.66■■■□□ 2.18
SNUPN-201ENST00000308588 TSPYL6Q8N831 410 aa28.65■■■□□ 2.18
SNUPN-201ENST00000308588 MYH16Q9H6N6 1097 aa28.65■■■□□ 2.18
SNUPN-201ENST00000308588 ATF5Q9Y2D1 282 aaPredicted RBP28.65■■■□□ 2.18
SNUPN-201ENST00000308588 ZNF330Q9Y3S2 320 aaPredicted RBP28.64■■■□□ 2.18
SNUPN-201ENST00000308588 C4AP0C0L4 1744 aa28.64■■■□□ 2.18
SNUPN-201ENST00000308588 NECTIN2Q92692 538 aa28.64■■■□□ 2.17
SNUPN-201ENST00000308588 PDIA6Q15084 440 aa28.63■■■□□ 2.17
SNUPN-201ENST00000308588 CDCA7LQ96GN5 454 aa28.63■■■□□ 2.17
SNUPN-201ENST00000308588 SPON1Q9HCB6 807 aa28.63■■■□□ 2.17
SNUPN-201ENST00000308588 SRP68Q9UHB9 627 aaKnown RBP28.63■■■□□ 2.17
SNUPN-201ENST00000308588 ERBB4Q15303 1308 aa28.62■■■□□ 2.17
SNUPN-201ENST00000308588 SLFN5Q08AF3 891 aa28.62■■■□□ 2.17
SNUPN-201ENST00000308588 USP42Q9H9J4 1324 aaKnown RBP28.62■■■□□ 2.17
SNUPN-201ENST00000308588 E9PSI1 815 aa28.61■■■□□ 2.17
SNUPN-201ENST00000308588 HDGFL1Q5TGJ6 251 aa28.61■■■□□ 2.17
SNUPN-201ENST00000308588 A0A087WZG4 1122 aa28.6■■■□□ 2.17
SNUPN-201ENST00000308588 GYS1P13807 737 aa28.6■■■□□ 2.17
SNUPN-201ENST00000308588 PTGER2P43116 358 aa28.6■■■□□ 2.17
SNUPN-201ENST00000308588 EXOSC9Q06265 439 aaKnown RBP28.6■■■□□ 2.17
SNUPN-201ENST00000308588 MSL1Q68DK7 614 aa28.6■■■□□ 2.17
SNUPN-201ENST00000308588 NARFQ9UHQ1 456 aa28.6■■■□□ 2.17
SNUPN-201ENST00000308588 MYL6BP14649 208 aa28.59■■■□□ 2.17
SNUPN-201ENST00000308588 PROSER3Q2NL68 480 aa28.59■■■□□ 2.17
SNUPN-201ENST00000308588 LRP10Q7Z4F1 713 aa28.59■■■□□ 2.17
SNUPN-201ENST00000308588 SGIP1Q9BQI5 828 aa28.59■■■□□ 2.17
SNUPN-201ENST00000308588 TWISTNBQ3B726 338 aaPredicted RBP28.59■■■□□ 2.17
SNUPN-201ENST00000308588 TBC1D2BQ9UPU7 963 aa28.59■■■□□ 2.17
SNUPN-201ENST00000308588 SRCAPQ6ZRS2 3230 aa28.58■■■□□ 2.17
SNUPN-201ENST00000308588 ZPR1O75312 459 aa28.58■■■□□ 2.17
SNUPN-201ENST00000308588 ANXA1P04083 346 aa28.58■■■□□ 2.17
SNUPN-201ENST00000308588 USPL1Q5W0Q7 1092 aa28.58■■■□□ 2.17
SNUPN-201ENST00000308588 NPM2Q86SE8 214 aaKnown RBP28.58■■■□□ 2.17
SNUPN-201ENST00000308588 COL24A1Q17RW2 1714 aa28.57■■■□□ 2.16
SNUPN-201ENST00000308588 TRMT2AQ8IZ69 625 aaKnown RBP28.57■■■□□ 2.16
SNUPN-201ENST00000308588 DDX21Q9NR30 783 aaKnown RBP eCLIP28.57■■■□□ 2.16
SNUPN-201ENST00000308588 CHPF2Q9P2E5 772 aa28.57■■■□□ 2.16
SNUPN-201ENST00000308588 DZIP3Q86Y13 1208 aaKnown RBP28.56■■■□□ 2.16
SNUPN-201ENST00000308588 BCL2L12Q9HB09 334 aa28.56■■■□□ 2.16
SNUPN-201ENST00000308588 NLGN1Q8N2Q7 840 aa28.55■■■□□ 2.16
SNUPN-201ENST00000308588 ARXQ96QS3 562 aa28.55■■■□□ 2.16
SNUPN-201ENST00000308588 FKBP8Q14318 412 aa28.54■■■□□ 2.16
SNUPN-201ENST00000308588 DBF4Q9UBU7 674 aaPredicted RBP28.54■■■□□ 2.16
SNUPN-201ENST00000308588 LRP5O75197 1615 aa28.54■■■□□ 2.16
SNUPN-201ENST00000308588 VAMP4O75379 141 aa28.53■■■□□ 2.16
SNUPN-201ENST00000308588 CAMTA2O94983 1202 aa28.53■■■□□ 2.16
SNUPN-201ENST00000308588 CCDC30Q5VVM6 783 aa28.53■■■□□ 2.16
SNUPN-201ENST00000308588 TTLL7Q6ZT98 887 aa28.52■■■□□ 2.16
SNUPN-201ENST00000308588 CHMP4AQ9BY43 222 aa28.52■■■□□ 2.16
SNUPN-201ENST00000308588 ZBED9Q6R2W3 1325 aa28.51■■■□□ 2.15
SNUPN-201ENST00000308588 POLD1P28340 1107 aa28.5■■■□□ 2.15
SNUPN-201ENST00000308588 SCN7AQ01118 1682 aa28.49■■■□□ 2.15
SNUPN-201ENST00000308588 MMP10P09238 476 aa28.48■■■□□ 2.15
SNUPN-201ENST00000308588 COPS6Q7L5N1 327 aa28.48■■■□□ 2.15
SNUPN-201ENST00000308588 HYPKQ9NX55 129 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms