RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 DNTTIP2Q5QJE6 756 aaKnown RBP20.05■□□□□ 0.8
SSH3-201ENST00000308127 AK2P54819 239 aa20.05■□□□□ 0.8
SSH3-201ENST00000308127 TTC12Q9H892 705 aaPredicted RBP20.05■□□□□ 0.8
SSH3-201ENST00000308127 PLEKHG3A1L390 1219 aa20.05■□□□□ 0.8
SSH3-201ENST00000308127 ZNF500O60304 480 aaPredicted RBP20.04■□□□□ 0.8
SSH3-201ENST00000308127 OS9Q13438 667 aaPredicted RBP20.04■□□□□ 0.8
SSH3-201ENST00000308127 SNX14Q9Y5W7 946 aa20.04■□□□□ 0.8
SSH3-201ENST00000308127 MCM2P49736 904 aa20.04■□□□□ 0.8
SSH3-201ENST00000308127 COL9A3Q14050 684 aaPredicted RBP20.04■□□□□ 0.8
SSH3-201ENST00000308127 RHPN1Q8TCX5 695 aa20.04■□□□□ 0.8
SSH3-201ENST00000308127 CCDC39Q9UFE4 941 aa20.04■□□□□ 0.8
SSH3-201ENST00000308127 AMOTL2Q9Y2J4 779 aa20.04■□□□□ 0.8
SSH3-201ENST00000308127 SPATA31D1Q6ZQQ2 1576 aa20.04■□□□□ 0.8
SSH3-201ENST00000308127 NRKQ7Z2Y5 1582 aa20.03■□□□□ 0.8
SSH3-201ENST00000308127 FLT4P35916 1363 aa20.03■□□□□ 0.8
SSH3-201ENST00000308127 AKAP12Q02952 1782 aa20.03■□□□□ 0.8
SSH3-201ENST00000308127 TAF7Q15545 349 aaPredicted RBP20.03■□□□□ 0.8
SSH3-201ENST00000308127 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.02■□□□□ 0.8
SSH3-201ENST00000308127 HSPA4P34932 840 aa20.02■□□□□ 0.8
SSH3-201ENST00000308127 CCDC83Q8IWF9 413 aa20.02■□□□□ 0.8
SSH3-201ENST00000308127 PI4K2BQ8TCG2 481 aa20.02■□□□□ 0.8
SSH3-201ENST00000308127 RPAP1Q9BWH6 1393 aaPredicted RBP20.02■□□□□ 0.8
SSH3-201ENST00000308127 CASTP20810 708 aaKnown RBP20.02■□□□□ 0.8
SSH3-201ENST00000308127 RUFY3Q7L099 469 aa20.02■□□□□ 0.8
SSH3-201ENST00000308127 PKNOX2Q96KN3 472 aa20.02■□□□□ 0.8
SSH3-201ENST00000308127 LGR6Q9HBX8 967 aa20.02■□□□□ 0.8
SSH3-201ENST00000308127 CHPF2Q9P2E5 772 aa20.02■□□□□ 0.8
SSH3-201ENST00000308127 ARHGEF10O15013 1369 aa20.02■□□□□ 0.8
SSH3-201ENST00000308127 IGSF1Q8N6C5 1336 aa20.01■□□□□ 0.79
SSH3-201ENST00000308127 PI4KAP2A4QPH2 592 aa20.01■□□□□ 0.79
SSH3-201ENST00000308127 GIMAP6Q6P9H5 292 aa20.01■□□□□ 0.79
SSH3-201ENST00000308127 PI4KAP1Q8N8J0 262 aa20.01■□□□□ 0.79
SSH3-201ENST00000308127 STAP2Q9UGK3 403 aa20.01■□□□□ 0.79
SSH3-201ENST00000308127 PA2G4Q9UQ80 394 aaKnown RBP20.01■□□□□ 0.79
SSH3-201ENST00000308127 HDGFP51858 240 aaKnown RBP20.01■□□□□ 0.79
SSH3-201ENST00000308127 TCEANC2Q96MN5 208 aa20.01■□□□□ 0.79
SSH3-201ENST00000308127 PDCL3Q9H2J4 239 aa20.01■□□□□ 0.79
SSH3-201ENST00000308127 SETD1BQ9UPS6 1966 aaKnown RBP20.01■□□□□ 0.79
SSH3-201ENST00000308127 WDR33Q9C0J8 1336 aaKnown RBP20.01■□□□□ 0.79
SSH3-201ENST00000308127 SYT1P21579 422 aa20.01■□□□□ 0.79
SSH3-201ENST00000308127 ADCK5Q3MIX3 580 aa20.01■□□□□ 0.79
SSH3-201ENST00000308127 HS1BP3Q53T59 392 aa20.01■□□□□ 0.79
SSH3-201ENST00000308127 INTS4Q96HW7 963 aaKnown RBP20.01■□□□□ 0.79
SSH3-201ENST00000308127 TMEM2Q9UHN6 1383 aa20■□□□□ 0.79
SSH3-201ENST00000308127 ANAPC15P60006 121 aa20■□□□□ 0.79
SSH3-201ENST00000308127 NECAB1Q8N987 351 aa20■□□□□ 0.79
SSH3-201ENST00000308127 PTH1RQ03431 593 aa20■□□□□ 0.79
SSH3-201ENST00000308127 FAM173BQ6P4H8 233 aa20■□□□□ 0.79
SSH3-201ENST00000308127 SBNO1A3KN83 1393 aa19.99■□□□□ 0.79
SSH3-201ENST00000308127 SGSM2O43147 1006 aa19.99■□□□□ 0.79
SSH3-201ENST00000308127 HOXC9P31274 260 aa19.99■□□□□ 0.79
SSH3-201ENST00000308127 ADAMTS13Q76LX8 1427 aa19.99■□□□□ 0.79
SSH3-201ENST00000308127 TNRQ92752 1358 aa19.99■□□□□ 0.79
SSH3-201ENST00000308127 PRPF40BQ6NWY9 871 aaKnown RBP19.99■□□□□ 0.79
SSH3-201ENST00000308127 FERMT3Q86UX7 667 aa19.99■□□□□ 0.79
SSH3-201ENST00000308127 SSH3Q8TE77 659 aa19.99■□□□□ 0.79
SSH3-201ENST00000308127 USP31Q70CQ4 1352 aa19.99■□□□□ 0.79
SSH3-201ENST00000308127 VPS37CA5D8V6 355 aaPredicted RBP19.98■□□□□ 0.79
SSH3-201ENST00000308127 DNM1Q05193 864 aaKnown RBP19.98■□□□□ 0.79
SSH3-201ENST00000308127 ABTB2Q8N961 1025 aa19.98■□□□□ 0.79
SSH3-201ENST00000308127 SYAP1Q96A49 352 aaPredicted RBP19.98■□□□□ 0.79
SSH3-201ENST00000308127 ADCY5O95622 1261 aa19.98■□□□□ 0.79
SSH3-201ENST00000308127 LSG1Q9H089 658 aaKnown RBP19.98■□□□□ 0.79
SSH3-201ENST00000308127 SMC3Q9UQE7 1217 aa19.98■□□□□ 0.79
SSH3-201ENST00000308127 PTPRUQ92729 1446 aa19.97■□□□□ 0.79
SSH3-201ENST00000308127 STX6O43752 255 aa19.97■□□□□ 0.79
SSH3-201ENST00000308127 RAD50Q92878 1312 aa19.97■□□□□ 0.79
SSH3-201ENST00000308127 TECPR2O15040 1411 aa19.97■□□□□ 0.79
SSH3-201ENST00000308127 JAKMIP1Q96N16 626 aaKnown RBP19.97■□□□□ 0.79
SSH3-201ENST00000308127 ZSCAN22P10073 491 aaPredicted RBP19.97■□□□□ 0.79
SSH3-201ENST00000308127 SPC24Q8NBT2 197 aa19.96■□□□□ 0.79
SSH3-201ENST00000308127 KDRP35968 1356 aa19.96■□□□□ 0.79
SSH3-201ENST00000308127 SIRT1Q96EB6 747 aa19.96■□□□□ 0.79
SSH3-201ENST00000308127 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.96■□□□□ 0.79
SSH3-201ENST00000308127 GJB2P29033 226 aa19.95■□□□□ 0.78
SSH3-201ENST00000308127 KIAA2012Q0VF49 1180 aa19.95■□□□□ 0.78
SSH3-201ENST00000308127 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.95■□□□□ 0.78
SSH3-201ENST00000308127 PRAMEF22A3QJZ6 481 aa19.95■□□□□ 0.78
SSH3-201ENST00000308127 CNTROBQ8N137 903 aa19.95■□□□□ 0.78
SSH3-201ENST00000308127 TTC14Q96N46 770 aa19.95■□□□□ 0.78
SSH3-201ENST00000308127 DIAPH3Q9NSV4 1193 aa19.95■□□□□ 0.78
SSH3-201ENST00000308127 RGPD1P0DJD0 1748 aa19.95■□□□□ 0.78
SSH3-201ENST00000308127 MPRIPQ6WCQ1 1025 aa19.94■□□□□ 0.78
SSH3-201ENST00000308127 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
SSH3-201ENST00000308127 MAP3K5Q99683 1374 aa19.94■□□□□ 0.78
SSH3-201ENST00000308127 LRRC59Q96AG4 307 aaKnown RBP19.94■□□□□ 0.78
SSH3-201ENST00000308127 PRDM10Q9NQV6 1147 aa19.94■□□□□ 0.78
SSH3-201ENST00000308127 LIMCH1Q9UPQ0 1083 aa19.94■□□□□ 0.78
SSH3-201ENST00000308127 CWF19L2Q2TBE0 894 aaKnown RBP19.93■□□□□ 0.78
SSH3-201ENST00000308127 KIF1BPQ96EK5 621 aa19.93■□□□□ 0.78
SSH3-201ENST00000308127 AP5Z1O43299 807 aa19.93■□□□□ 0.78
SSH3-201ENST00000308127 F13A1P00488 732 aa19.93■□□□□ 0.78
SSH3-201ENST00000308127 CAMK4Q16566 473 aa19.93■□□□□ 0.78
SSH3-201ENST00000308127 CCDC183Q5T5S1 534 aa19.93■□□□□ 0.78
SSH3-201ENST00000308127 PROSER3Q2NL68 480 aa19.93■□□□□ 0.78
SSH3-201ENST00000308127 DNAAF4Q8WXU2 420 aa19.92■□□□□ 0.78
SSH3-201ENST00000308127 BCL11BQ9C0K0 894 aaPredicted RBP19.92■□□□□ 0.78
SSH3-201ENST00000308127 SIL1Q9H173 461 aa19.92■□□□□ 0.78
SSH3-201ENST00000308127 KCNJ4P48050 445 aa19.92■□□□□ 0.78
SSH3-201ENST00000308127 FAM227BQ96M60 508 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms