RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 JAKMIP1Q96N16 626 aaKnown RBP16.89■□□□□ 0.29
SDC2-201ENST00000302190 NEUROD6Q96NK8 337 aa16.89■□□□□ 0.29
SDC2-201ENST00000302190 PLEKHG3A1L390 1219 aa16.89■□□□□ 0.29
SDC2-201ENST00000302190 RBM25P49756 843 aaKnown RBP16.89■□□□□ 0.29
SDC2-201ENST00000302190 MTHFSDQ2M296 383 aaKnown RBP16.89■□□□□ 0.29
SDC2-201ENST00000302190 MBD3O95983 291 aa16.88■□□□□ 0.29
SDC2-201ENST00000302190 CASTP20810 708 aaKnown RBP16.88■□□□□ 0.29
SDC2-201ENST00000302190 SNX21Q969T3 373 aa16.88■□□□□ 0.29
SDC2-201ENST00000302190 PUS7Q96PZ0 661 aaKnown RBP16.88■□□□□ 0.29
SDC2-201ENST00000302190 NLRP2Q9NX02 1062 aa16.88■□□□□ 0.29
SDC2-201ENST00000302190 CPA1P15085 419 aa16.88■□□□□ 0.29
SDC2-201ENST00000302190 ARHGAP45Q92619 1136 aa16.88■□□□□ 0.29
SDC2-201ENST00000302190 CPSF1Q10570 1443 aaKnown RBP16.88■□□□□ 0.29
SDC2-201ENST00000302190 IL13P35225 146 aa16.88■□□□□ 0.29
SDC2-201ENST00000302190 KLHL40Q2TBA0 621 aa16.88■□□□□ 0.29
SDC2-201ENST00000302190 DNAJC2Q99543 621 aaKnown RBP16.88■□□□□ 0.29
SDC2-201ENST00000302190 ATP6V1DQ9Y5K8 247 aa16.88■□□□□ 0.29
SDC2-201ENST00000302190 GNAT3A8MTJ3 354 aa16.87■□□□□ 0.29
SDC2-201ENST00000302190 CAMK4Q16566 473 aa16.87■□□□□ 0.29
SDC2-201ENST00000302190 SIRT2Q8IXJ6 389 aa16.87■□□□□ 0.29
SDC2-201ENST00000302190 USP25Q9UHP3 1055 aa16.87■□□□□ 0.29
SDC2-201ENST00000302190 KRT28Q7Z3Y7 464 aa16.87■□□□□ 0.29
SDC2-201ENST00000302190 PRPF40BQ6NWY9 871 aaKnown RBP16.86■□□□□ 0.29
SDC2-201ENST00000302190 AACSQ86V21 672 aa16.86■□□□□ 0.29
SDC2-201ENST00000302190 USP26Q9BXU7 913 aa16.86■□□□□ 0.29
SDC2-201ENST00000302190 PIP4K2BP78356 416 aa16.86■□□□□ 0.29
SDC2-201ENST00000302190 NEXNQ0ZGT2 675 aa16.86■□□□□ 0.29
SDC2-201ENST00000302190 PPP1R42Q7Z4L9 355 aa16.86■□□□□ 0.29
SDC2-201ENST00000302190 CCDC8Q9H0W5 538 aaPredicted RBP16.86■□□□□ 0.29
SDC2-201ENST00000302190 USP6P35125 1406 aa16.86■□□□□ 0.29
SDC2-201ENST00000302190 PTCH1Q13635 1447 aa16.86■□□□□ 0.29
SDC2-201ENST00000302190 PI4KAP2A4QPH2 592 aa16.85■□□□□ 0.29
SDC2-201ENST00000302190 PI4KAP1Q8N8J0 262 aa16.85■□□□□ 0.29
SDC2-201ENST00000302190 MAP3K19Q56UN5 1328 aa16.85■□□□□ 0.29
SDC2-201ENST00000302190 EDC4Q6P2E9 1401 aaKnown RBP16.85■□□□□ 0.29
SDC2-201ENST00000302190 GNL2Q13823 731 aaKnown RBP16.85■□□□□ 0.29
SDC2-201ENST00000302190 CHD2O14647 1828 aaKnown RBP16.85■□□□□ 0.29
SDC2-201ENST00000302190 ZNF142P52746 1687 aaPredicted RBP16.85■□□□□ 0.29
SDC2-201ENST00000302190 CHRNA2Q15822 529 aa16.85■□□□□ 0.29
SDC2-201ENST00000302190 UQCRHLA0A096LP55 91 aa16.84■□□□□ 0.29
SDC2-201ENST00000302190 UQCRHP07919 91 aa16.84■□□□□ 0.29
SDC2-201ENST00000302190 BOLA2Q9H3K6 86 aa16.84■□□□□ 0.29
SDC2-201ENST00000302190 ISY1Q9ULR0 285 aaKnown RBP16.84■□□□□ 0.29
SDC2-201ENST00000302190 SF3A1Q15459 793 aaKnown RBP16.84■□□□□ 0.29
SDC2-201ENST00000302190 MSH6P52701 1360 aa16.84■□□□□ 0.29
SDC2-201ENST00000302190 NALCNQ8IZF0 1738 aa16.84■□□□□ 0.29
SDC2-201ENST00000302190 PHAXQ9H814 394 aaKnown RBP16.84■□□□□ 0.29
SDC2-201ENST00000302190 USP32Q8NFA0 1604 aa16.84■□□□□ 0.29
SDC2-201ENST00000302190 TAF7LQ5H9L4 462 aa16.83■□□□□ 0.29
SDC2-201ENST00000302190 CCDC39Q9UFE4 941 aa16.83■□□□□ 0.29
SDC2-201ENST00000302190 DDX11Q96FC9 970 aa16.83■□□□□ 0.28
SDC2-201ENST00000302190 ZHX1Q9UKY1 873 aaPredicted RBP16.83■□□□□ 0.28
SDC2-201ENST00000302190 WDR33Q9C0J8 1336 aaKnown RBP16.83■□□□□ 0.28
SDC2-201ENST00000302190 PIP4K2AP48426 406 aaPredicted RBP16.83■□□□□ 0.28
SDC2-201ENST00000302190 MCM2P49736 904 aa16.83■□□□□ 0.28
SDC2-201ENST00000302190 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.83■□□□□ 0.28
SDC2-201ENST00000302190 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
SDC2-201ENST00000302190 PNMA6EA0A0J9YXQ4 647 aa16.82■□□□□ 0.28
SDC2-201ENST00000302190 BTBD11A6QL63 1104 aa16.82■□□□□ 0.28
SDC2-201ENST00000302190 CSPP1Q1MSJ5 1256 aa16.82■□□□□ 0.28
SDC2-201ENST00000302190 NECAB1Q8N987 351 aa16.82■□□□□ 0.28
SDC2-201ENST00000302190 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
SDC2-201ENST00000302190 BECN2A8MW95 431 aa16.82■□□□□ 0.28
SDC2-201ENST00000302190 LARP1BQ659C4 914 aaKnown RBP16.82■□□□□ 0.28
SDC2-201ENST00000302190 CCDC85AQ96PX6 553 aaPredicted RBP16.82■□□□□ 0.28
SDC2-201ENST00000302190 RBSNQ9H1K0 784 aa16.82■□□□□ 0.28
SDC2-201ENST00000302190 TOMM22Q9NS69 142 aa16.82■□□□□ 0.28
SDC2-201ENST00000302190 TFIP11Q9UBB9 837 aaKnown RBP16.82■□□□□ 0.28
SDC2-201ENST00000302190 SHPRHQ149N8 1683 aa16.82■□□□□ 0.28
SDC2-201ENST00000302190 XRN1Q8IZH2 1706 aaKnown RBP16.82■□□□□ 0.28
SDC2-201ENST00000302190 HCLS1P14317 486 aaPredicted RBP16.81■□□□□ 0.28
SDC2-201ENST00000302190 FMNL2Q96PY5 1086 aa16.81■□□□□ 0.28
SDC2-201ENST00000302190 PA2G4Q9UQ80 394 aaKnown RBP16.81■□□□□ 0.28
SDC2-201ENST00000302190 KNDC1Q76NI1 1749 aa16.81■□□□□ 0.28
SDC2-201ENST00000302190 ADGRL3Q9HAR2 1447 aa16.81■□□□□ 0.28
SDC2-201ENST00000302190 TTC5Q8N0Z6 440 aa16.81■□□□□ 0.28
SDC2-201ENST00000302190 CYP46A1Q9Y6A2 500 aa16.81■□□□□ 0.28
SDC2-201ENST00000302190 STRCP1A6NGW2 1772 aa16.81■□□□□ 0.28
SDC2-201ENST00000302190 GOLGA6L19H0YKK7 550 aa16.8■□□□□ 0.28
SDC2-201ENST00000302190 STK11IPQ8N1F8 1099 aa16.8■□□□□ 0.28
SDC2-201ENST00000302190 EYA1Q99502 592 aa16.8■□□□□ 0.28
SDC2-201ENST00000302190 ESYT1Q9BSJ8 1104 aa16.8■□□□□ 0.28
SDC2-201ENST00000302190 PIK3R4Q99570 1358 aa16.8■□□□□ 0.28
SDC2-201ENST00000302190 PDRG1Q9NUG6 133 aa16.8■□□□□ 0.28
SDC2-201ENST00000302190 NPHP1O15259 732 aa16.8■□□□□ 0.28
SDC2-201ENST00000302190 HSP90AB4PQ58FF6 505 aa16.8■□□□□ 0.28
SDC2-201ENST00000302190 CDC42BPGQ6DT37 1551 aa16.8■□□□□ 0.28
SDC2-201ENST00000302190 GOLGA6L6A8MZA4 724 aa16.79■□□□□ 0.28
SDC2-201ENST00000302190 CKAP2LQ8IYA6 745 aa16.79■□□□□ 0.28
SDC2-201ENST00000302190 BBXQ8WY36 941 aaPredicted RBP16.79■□□□□ 0.28
SDC2-201ENST00000302190 TRIM5Q9C035 493 aa16.79■□□□□ 0.28
SDC2-201ENST00000302190 PTPRCP08575 1304 aa16.79■□□□□ 0.28
SDC2-201ENST00000302190 GIMAP6Q6P9H5 292 aa16.79■□□□□ 0.28
SDC2-201ENST00000302190 AEBP2Q6ZN18 517 aaPredicted RBP16.79■□□□□ 0.28
SDC2-201ENST00000302190 CNPY2Q9Y2B0 182 aa16.79■□□□□ 0.28
SDC2-201ENST00000302190 FAM177BA6PVY3 158 aa16.79■□□□□ 0.28
SDC2-201ENST00000302190 DDX58O95786 925 aaKnown RBP16.79■□□□□ 0.28
SDC2-201ENST00000302190 RAPGEF4Q8WZA2 1011 aa16.79■□□□□ 0.28
SDC2-201ENST00000302190 SLAIN2Q9P270 581 aa16.78■□□□□ 0.28
SDC2-201ENST00000302190 CHPF2Q9P2E5 772 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms