RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 MAP3K11Q16584 847 aa17.49■□□□□ 0.39
CDH23-202ENST00000299366 HSP90AA4PQ58FG1 418 aa17.49■□□□□ 0.39
CDH23-202ENST00000299366 TMX1Q9H3N1 280 aa17.49■□□□□ 0.39
CDH23-202ENST00000299366 STX6O43752 255 aa17.49■□□□□ 0.39
CDH23-202ENST00000299366 RAB3GAP1Q15042 981 aa17.49■□□□□ 0.39
CDH23-202ENST00000299366 ABCF2Q9UG63 623 aa17.49■□□□□ 0.39
CDH23-202ENST00000299366 PLCH2O75038 1416 aa17.49■□□□□ 0.39
CDH23-202ENST00000299366 BICDL1Q6ZP65 573 aa17.49■□□□□ 0.39
CDH23-202ENST00000299366 GOLIM4O00461 696 aa17.48■□□□□ 0.39
CDH23-202ENST00000299366 ADCY5O95622 1261 aa17.48■□□□□ 0.39
CDH23-202ENST00000299366 TPM1P09493 284 aa17.48■□□□□ 0.39
CDH23-202ENST00000299366 CHST3Q7LGC8 479 aa17.48■□□□□ 0.39
CDH23-202ENST00000299366 TTC21BQ7Z4L5 1316 aa17.48■□□□□ 0.39
CDH23-202ENST00000299366 HIP1O00291 1037 aa17.48■□□□□ 0.39
CDH23-202ENST00000299366 GOLGA6L1Q8N7Z2 621 aa17.48■□□□□ 0.39
CDH23-202ENST00000299366 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
CDH23-202ENST00000299366 LRRIQ1Q96JM4 1722 aa17.48■□□□□ 0.39
CDH23-202ENST00000299366 TBC1D2BQ9UPU7 963 aa17.47■□□□□ 0.39
CDH23-202ENST00000299366 PKP1Q13835 747 aa17.47■□□□□ 0.39
CDH23-202ENST00000299366 KLHDC4Q8TBB5 520 aa17.47■□□□□ 0.39
CDH23-202ENST00000299366 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
CDH23-202ENST00000299366 POLR3DP05423 398 aaPredicted RBP17.47■□□□□ 0.39
CDH23-202ENST00000299366 ESYT1Q9BSJ8 1104 aa17.47■□□□□ 0.39
CDH23-202ENST00000299366 NAT10Q9H0A0 1025 aaKnown RBP17.47■□□□□ 0.39
CDH23-202ENST00000299366 NDUFB9Q9Y6M9 179 aa17.47■□□□□ 0.39
CDH23-202ENST00000299366 KIAA0556O60303 1618 aa17.47■□□□□ 0.39
CDH23-202ENST00000299366 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
CDH23-202ENST00000299366 DNM1Q05193 864 aaKnown RBP17.47■□□□□ 0.39
CDH23-202ENST00000299366 OLFM4Q6UX06 510 aa17.47■□□□□ 0.39
CDH23-202ENST00000299366 CCDC112Q8NEF3 446 aa17.47■□□□□ 0.39
CDH23-202ENST00000299366 DCTPP1Q9H773 170 aa17.47■□□□□ 0.39
CDH23-202ENST00000299366 USP48Q86UV5 1035 aa17.46■□□□□ 0.39
CDH23-202ENST00000299366 CABLES1Q8TDN4 633 aa17.46■□□□□ 0.39
CDH23-202ENST00000299366 ANKLE2Q86XL3 938 aa17.46■□□□□ 0.39
CDH23-202ENST00000299366 DBF4Q9UBU7 674 aaPredicted RBP17.46■□□□□ 0.39
CDH23-202ENST00000299366 ADAMTS12P58397 1594 aa17.46■□□□□ 0.39
CDH23-202ENST00000299366 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.38
CDH23-202ENST00000299366 SLC4A8Q2Y0W8 1093 aa17.45■□□□□ 0.38
CDH23-202ENST00000299366 HSP90AB3PQ58FF7 597 aa17.45■□□□□ 0.38
CDH23-202ENST00000299366 EYA1Q99502 592 aa17.45■□□□□ 0.38
CDH23-202ENST00000299366 SPDYE4A6NLX3 237 aa17.45■□□□□ 0.38
CDH23-202ENST00000299366 NUTM2BA6NNL0 878 aaPredicted RBP17.45■□□□□ 0.38
CDH23-202ENST00000299366 NUTM2EB1AL46 878 aaPredicted RBP17.45■□□□□ 0.38
CDH23-202ENST00000299366 NUTM2AQ8IVF1 878 aaPredicted RBP17.45■□□□□ 0.38
CDH23-202ENST00000299366 LETM1O95202 739 aaPredicted RBP17.45■□□□□ 0.38
CDH23-202ENST00000299366 NAP1L1P55209 391 aaKnown RBP17.45■□□□□ 0.38
CDH23-202ENST00000299366 IL16Q14005 1332 aa17.44■□□□□ 0.38
CDH23-202ENST00000299366 BRF1Q92994 677 aa17.44■□□□□ 0.38
CDH23-202ENST00000299366 PTPRCP08575 1304 aa17.44■□□□□ 0.38
CDH23-202ENST00000299366 HMGN5P82970 282 aaKnown RBP17.44■□□□□ 0.38
CDH23-202ENST00000299366 ANKRD1Q15327 319 aa17.44■□□□□ 0.38
CDH23-202ENST00000299366 CCDC183Q5T5S1 534 aa17.44■□□□□ 0.38
CDH23-202ENST00000299366 IPO7O95373 1038 aaKnown RBP17.44■□□□□ 0.38
CDH23-202ENST00000299366 KLHL10Q6JEL2 608 aa17.44■□□□□ 0.38
CDH23-202ENST00000299366 RBSNQ9H1K0 784 aa17.44■□□□□ 0.38
CDH23-202ENST00000299366 IGSF3O75054 1194 aa17.43■□□□□ 0.38
CDH23-202ENST00000299366 IFIT1P09914 478 aaKnown RBP17.43■□□□□ 0.38
CDH23-202ENST00000299366 ZNF396Q96N95 335 aaPredicted RBP17.43■□□□□ 0.38
CDH23-202ENST00000299366 KIF6Q6ZMV9 814 aa17.43■□□□□ 0.38
CDH23-202ENST00000299366 C17orf53Q8N3J3 647 aaPredicted RBP17.43■□□□□ 0.38
CDH23-202ENST00000299366 MPHOSPH8Q99549 860 aa17.43■□□□□ 0.38
CDH23-202ENST00000299366 ADGRL2O95490 1459 aa17.43■□□□□ 0.38
CDH23-202ENST00000299366 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
CDH23-202ENST00000299366 TSC1Q92574 1164 aa17.42■□□□□ 0.38
CDH23-202ENST00000299366 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
CDH23-202ENST00000299366 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
CDH23-202ENST00000299366 LARP1Q6PKG0 1096 aaKnown RBP17.42■□□□□ 0.38
CDH23-202ENST00000299366 USP26Q9BXU7 913 aa17.42■□□□□ 0.38
CDH23-202ENST00000299366 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
CDH23-202ENST00000299366 METTL24Q5JXM2 366 aa17.42■□□□□ 0.38
CDH23-202ENST00000299366 COPS6Q7L5N1 327 aa17.42■□□□□ 0.38
CDH23-202ENST00000299366 MAP3K19Q56UN5 1328 aa17.41■□□□□ 0.38
CDH23-202ENST00000299366 MINDY4BA8MYZ0 360 aa17.41■□□□□ 0.38
CDH23-202ENST00000299366 SNX21Q969T3 373 aa17.41■□□□□ 0.38
CDH23-202ENST00000299366 ERICH4A6NGS2 130 aa17.41■□□□□ 0.38
CDH23-202ENST00000299366 CFAP100Q494V2 611 aa17.41■□□□□ 0.38
CDH23-202ENST00000299366 TDO2P48775 406 aa17.41■□□□□ 0.38
CDH23-202ENST00000299366 IQSEC3Q9UPP2 1182 aaPredicted RBP17.41■□□□□ 0.38
CDH23-202ENST00000299366 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.4■□□□□ 0.38
CDH23-202ENST00000299366 V9GYY5 206 aaPredicted RBP17.4■□□□□ 0.38
CDH23-202ENST00000299366 ATP2B2Q01814 1243 aa17.4■□□□□ 0.38
CDH23-202ENST00000299366 CFAP45Q9UL16 551 aa17.4■□□□□ 0.38
CDH23-202ENST00000299366 RBM8AQ9Y5S9 174 aaKnown RBP17.4■□□□□ 0.38
CDH23-202ENST00000299366 ZNF165P49910 485 aa17.4■□□□□ 0.38
CDH23-202ENST00000299366 AK2P54819 239 aa17.4■□□□□ 0.38
CDH23-202ENST00000299366 XAGE3Q8WTP9 111 aa17.4■□□□□ 0.38
CDH23-202ENST00000299366 HOOK1Q9UJC3 728 aaKnown RBP17.4■□□□□ 0.38
CDH23-202ENST00000299366 WDR7Q9Y4E6 1490 aa17.4■□□□□ 0.38
CDH23-202ENST00000299366 CEP57L1Q8IYX8 460 aa17.39■□□□□ 0.38
CDH23-202ENST00000299366 MSH6P52701 1360 aa17.39■□□□□ 0.37
CDH23-202ENST00000299366 OFD1O75665 1012 aa17.39■□□□□ 0.37
CDH23-202ENST00000299366 ANKRD20A12PQ8NF67 263 aa17.39■□□□□ 0.37
CDH23-202ENST00000299366 TRERF1Q96PN7 1200 aa17.39■□□□□ 0.37
CDH23-202ENST00000299366 TMX4Q9H1E5 349 aaPredicted RBP17.39■□□□□ 0.37
CDH23-202ENST00000299366 ASXL2Q76L83 1435 aa17.39■□□□□ 0.37
CDH23-202ENST00000299366 SART3Q15020 963 aaKnown RBP17.39■□□□□ 0.37
CDH23-202ENST00000299366 MAP7D2Q96T17 732 aa17.39■□□□□ 0.37
CDH23-202ENST00000299366 RBM25P49756 843 aaKnown RBP17.38■□□□□ 0.37
CDH23-202ENST00000299366 NSD2O96028 1365 aa17.38■□□□□ 0.37
CDH23-202ENST00000299366 DACT1Q9NYF0 836 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms