RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ERVV-2B6SEH9 535 aa14.37□□□□□ -0.11
SYNGAP1-201ENST00000293748 A0A0U1RQG5 324 aaPredicted RBP14.36□□□□□ -0.11
SYNGAP1-201ENST00000293748 PHKG2P15735 406 aa14.36□□□□□ -0.11
SYNGAP1-201ENST00000293748 NFE2L2Q16236 605 aa14.36□□□□□ -0.11
SYNGAP1-201ENST00000293748 MARCH10Q8NA82 808 aaPredicted RBP14.36□□□□□ -0.11
SYNGAP1-201ENST00000293748 H3BQV1 296 aa14.35□□□□□ -0.11
SYNGAP1-201ENST00000293748 IFFO2Q5TF58 517 aa14.35□□□□□ -0.11
SYNGAP1-201ENST00000293748 BCL2L13Q9BXK5 485 aa14.35□□□□□ -0.11
SYNGAP1-201ENST00000293748 MARF1Q9Y4F3 1742 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-201ENST00000293748 TEX35Q5T0J7 233 aa14.35□□□□□ -0.11
SYNGAP1-201ENST00000293748 CLSTN1O94985 981 aa14.34□□□□□ -0.11
SYNGAP1-201ENST00000293748 RRP7AQ9Y3A4 280 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-201ENST00000293748 MAP3K5Q99683 1374 aa14.34□□□□□ -0.11
SYNGAP1-201ENST00000293748 FAM184AQ8NB25 1140 aa14.34□□□□□ -0.11
SYNGAP1-201ENST00000293748 ABCA3Q99758 1704 aa14.33□□□□□ -0.11
SYNGAP1-201ENST00000293748 TPM1P09493 284 aa14.33□□□□□ -0.12
SYNGAP1-201ENST00000293748 ISY1Q9ULR0 285 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-201ENST00000293748 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-201ENST00000293748 APAF1O14727 1248 aa14.33□□□□□ -0.12
SYNGAP1-201ENST00000293748 MTHFSDQ2M296 383 aaKnown RBP14.33□□□□□ -0.12
SYNGAP1-201ENST00000293748 ILDR2Q71H61 639 aa14.33□□□□□ -0.12
SYNGAP1-201ENST00000293748 RASSF8Q8NHQ8 419 aa14.33□□□□□ -0.12
SYNGAP1-201ENST00000293748 TEX13AQ9BXU3 409 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-201ENST00000293748 CCNL1Q9UK58 526 aaPredicted RBP14.33□□□□□ -0.12
SYNGAP1-201ENST00000293748 ANKRD26Q9UPS8 1709 aa14.33□□□□□ -0.12
SYNGAP1-201ENST00000293748 TSR1Q2NL82 804 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-201ENST00000293748 RILPL2Q969X0 211 aa14.32□□□□□ -0.12
SYNGAP1-201ENST00000293748 AK7Q96M32 723 aa14.32□□□□□ -0.12
SYNGAP1-201ENST00000293748 FAM208AQ9UK61 1670 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-201ENST00000293748 DZIP1LQ8IYY4 767 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-201ENST00000293748 UPF1Q92900 1129 aaKnown RBP eCLIP14.32□□□□□ -0.12
SYNGAP1-201ENST00000293748 DIAPH3Q9NSV4 1193 aa14.32□□□□□ -0.12
SYNGAP1-201ENST00000293748 ADAMTS8Q9UP79 889 aa14.32□□□□□ -0.12
SYNGAP1-201ENST00000293748 CCDC70Q6NSX1 233 aa14.31□□□□□ -0.12
SYNGAP1-201ENST00000293748 LTN1O94822 1766 aa14.31□□□□□ -0.12
SYNGAP1-201ENST00000293748 BTBD11A6QL63 1104 aa14.31□□□□□ -0.12
SYNGAP1-201ENST00000293748 RNMTO43148 476 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-201ENST00000293748 TPM2P07951 284 aa14.31□□□□□ -0.12
SYNGAP1-201ENST00000293748 CCAR2Q8N163 923 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-201ENST00000293748 RUFY2Q8WXA3 655 aa14.31□□□□□ -0.12
SYNGAP1-201ENST00000293748 C22orf23Q9BZE7 217 aa14.31□□□□□ -0.12
SYNGAP1-201ENST00000293748 USP54Q70EL1 1684 aa14.31□□□□□ -0.12
SYNGAP1-201ENST00000293748 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
SYNGAP1-201ENST00000293748 STARD3NLO95772 234 aa14.31□□□□□ -0.12
SYNGAP1-201ENST00000293748 ZNF592Q92610 1267 aa14.31□□□□□ -0.12
SYNGAP1-201ENST00000293748 TSPYL4Q9UJ04 414 aa14.3□□□□□ -0.12
SYNGAP1-201ENST00000293748 EN1Q05925 392 aaPredicted RBP14.3□□□□□ -0.12
SYNGAP1-201ENST00000293748 SLC27A3Q5K4L6 730 aa14.3□□□□□ -0.12
SYNGAP1-201ENST00000293748 ZNF330Q9Y3S2 320 aaPredicted RBP14.3□□□□□ -0.12
SYNGAP1-201ENST00000293748 ZKSCAN1P17029 563 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 API5Q9BZZ5 524 aaKnown RBP14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 CYP27B1O15528 508 aa14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 GNAI1P63096 354 aa14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 FOXD4L6Q3SYB3 417 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 FOXD4L3Q6VB84 417 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 LMO7Q8WWI1 1683 aa14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 KAT6BQ8WYB5 2073 aa14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 ATP6V1AP38606 617 aa14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 TAF7Q15545 349 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 TAF7LQ5H9L4 462 aa14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 FLAD1Q8NFF5 587 aa14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 NASPP49321 788 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 FMNL2Q96PY5 1086 aa14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 CCDC39Q9UFE4 941 aa14.29□□□□□ -0.12
SYNGAP1-201ENST00000293748 KDRP35968 1356 aa14.28□□□□□ -0.12
SYNGAP1-201ENST00000293748 PTCD1O75127 700 aaKnown RBP14.28□□□□□ -0.12
SYNGAP1-201ENST00000293748 CHMP3Q9Y3E7 222 aa14.28□□□□□ -0.12
SYNGAP1-201ENST00000293748 TMPOP42166 694 aaKnown RBP14.28□□□□□ -0.12
SYNGAP1-201ENST00000293748 TPD52L1Q16890 204 aaPredicted RBP14.28□□□□□ -0.12
SYNGAP1-201ENST00000293748 MEGF6O75095 1541 aa14.28□□□□□ -0.12
SYNGAP1-201ENST00000293748 NCAPD2Q15021 1401 aa14.28□□□□□ -0.12
SYNGAP1-201ENST00000293748 CREBRFQ8IUR6 639 aa14.28□□□□□ -0.12
SYNGAP1-201ENST00000293748 SLC52A2Q9HAB3 445 aa14.28□□□□□ -0.12
SYNGAP1-201ENST00000293748 GLI3P10071 1580 aa14.28□□□□□ -0.12
SYNGAP1-201ENST00000293748 MAP2P11137 1827 aaKnown RBP14.28□□□□□ -0.12
SYNGAP1-201ENST00000293748 CPLX2Q6PUV4 134 aaKnown RBP14.27□□□□□ -0.12
SYNGAP1-201ENST00000293748 ARGLU1Q9NWB6 273 aaPredicted RBP14.27□□□□□ -0.12
SYNGAP1-201ENST00000293748 TFCP2L1Q9NZI6 479 aa14.27□□□□□ -0.12
SYNGAP1-201ENST00000293748 NFATC2IPQ8NCF5 419 aa14.27□□□□□ -0.12
SYNGAP1-201ENST00000293748 INTS3Q68E01 1043 aaKnown RBP14.27□□□□□ -0.13
SYNGAP1-201ENST00000293748 DISP2A7MBM2 1401 aa14.27□□□□□ -0.13
SYNGAP1-201ENST00000293748 CEP89Q96ST8 783 aa14.27□□□□□ -0.13
SYNGAP1-201ENST00000293748 NKX1-1Q15270 411 aaPredicted RBP14.26□□□□□ -0.13
SYNGAP1-201ENST00000293748 PLSCR1O15162 318 aa14.26□□□□□ -0.13
SYNGAP1-201ENST00000293748 TRAK2O60296 914 aa14.26□□□□□ -0.13
SYNGAP1-201ENST00000293748 TXNRD1Q16881 649 aa14.26□□□□□ -0.13
SYNGAP1-201ENST00000293748 HOMER1Q86YM7 354 aa14.26□□□□□ -0.13
SYNGAP1-201ENST00000293748 PPP1R1BQ9UD71 204 aaPredicted RBP14.26□□□□□ -0.13
SYNGAP1-201ENST00000293748 ELL2O00472 640 aaPredicted RBP14.25□□□□□ -0.13
SYNGAP1-201ENST00000293748 IPO7O95373 1038 aaKnown RBP14.25□□□□□ -0.13
SYNGAP1-201ENST00000293748 R3HCC1Q9Y3T6 440 aaKnown RBP14.25□□□□□ -0.13
SYNGAP1-201ENST00000293748 DEFB132Q7Z7B7 95 aa14.25□□□□□ -0.13
SYNGAP1-201ENST00000293748 MCM10Q7L590 875 aa14.25□□□□□ -0.13
SYNGAP1-201ENST00000293748 PALLDQ8WX93 1383 aa14.24□□□□□ -0.13
SYNGAP1-201ENST00000293748 MCTP1Q6DN14 999 aa14.24□□□□□ -0.13
SYNGAP1-201ENST00000293748 BICD2Q8TD16 824 aa14.24□□□□□ -0.13
SYNGAP1-201ENST00000293748 A0A087WZG4 1122 aa14.24□□□□□ -0.13
SYNGAP1-201ENST00000293748 HMGN5P82970 282 aaKnown RBP14.24□□□□□ -0.13
SYNGAP1-201ENST00000293748 CRYBG1Q9Y4K1 1723 aa14.24□□□□□ -0.13
SYNGAP1-201ENST00000293748 MBD3O95983 291 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms