RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 BABAM1Q9NWV8 329 aa23.2■■□□□ 1.3
LSM12-201ENST00000293406 SURF6O75683 361 aaKnown RBP23.2■■□□□ 1.3
LSM12-201ENST00000293406 PHF14O94880 888 aa23.2■■□□□ 1.3
LSM12-201ENST00000293406 AMOTL2Q9Y2J4 779 aa23.2■■□□□ 1.3
LSM12-201ENST00000293406 NLRP6P59044 892 aa23.19■■□□□ 1.3
LSM12-201ENST00000293406 HDGFL1Q5TGJ6 251 aa23.19■■□□□ 1.3
LSM12-201ENST00000293406 GDPD2Q9HCC8 539 aa23.19■■□□□ 1.3
LSM12-201ENST00000293406 PPP1R42Q7Z4L9 355 aa23.19■■□□□ 1.3
LSM12-201ENST00000293406 N4BP2Q86UW6 1770 aaPredicted RBP23.19■■□□□ 1.3
LSM12-201ENST00000293406 CACNA1FO60840 1977 aa23.18■■□□□ 1.3
LSM12-201ENST00000293406 GADD45BO75293 160 aaPredicted RBP23.18■■□□□ 1.3
LSM12-201ENST00000293406 MAP4K4O95819 1239 aaPredicted RBP23.18■■□□□ 1.3
LSM12-201ENST00000293406 HOXC9P31274 260 aa23.18■■□□□ 1.3
LSM12-201ENST00000293406 USP48Q86UV5 1035 aa23.18■■□□□ 1.3
LSM12-201ENST00000293406 CSPP1Q1MSJ5 1256 aa23.17■■□□□ 1.3
LSM12-201ENST00000293406 PHAXQ9H814 394 aaKnown RBP23.17■■□□□ 1.3
LSM12-201ENST00000293406 PIK3C2AO00443 1686 aa23.17■■□□□ 1.3
LSM12-201ENST00000293406 PI4K2BQ8TCG2 481 aa23.17■■□□□ 1.3
LSM12-201ENST00000293406 RHPN1Q8TCX5 695 aa23.17■■□□□ 1.3
LSM12-201ENST00000293406 PDCL3Q9H2J4 239 aa23.17■■□□□ 1.3
LSM12-201ENST00000293406 RAD50Q92878 1312 aa23.17■■□□□ 1.3
LSM12-201ENST00000293406 PLEKHG5O94827 1062 aa23.16■■□□□ 1.3
LSM12-201ENST00000293406 POLA2Q14181 598 aa23.16■■□□□ 1.3
LSM12-201ENST00000293406 SGSM2O43147 1006 aa23.16■■□□□ 1.3
LSM12-201ENST00000293406 EID1Q9Y6B2 187 aa23.16■■□□□ 1.3
LSM12-201ENST00000293406 KIF1BPQ96EK5 621 aa23.15■■□□□ 1.3
LSM12-201ENST00000293406 SRGAP3O43295 1099 aa23.14■■□□□ 1.3
LSM12-201ENST00000293406 CNTROBQ8N137 903 aa23.14■■□□□ 1.3
LSM12-201ENST00000293406 SNX14Q9Y5W7 946 aa23.14■■□□□ 1.3
LSM12-201ENST00000293406 RPAP1Q9BWH6 1393 aaPredicted RBP23.14■■□□□ 1.29
LSM12-201ENST00000293406 PTMAP06454 111 aaKnown RBP23.14■■□□□ 1.29
LSM12-201ENST00000293406 LTV1Q96GA3 475 aaPredicted RBP23.14■■□□□ 1.29
LSM12-201ENST00000293406 DIP2AQ14689 1571 aa23.13■■□□□ 1.29
LSM12-201ENST00000293406 NUTM2GQ5VZR2 741 aa23.13■■□□□ 1.29
LSM12-201ENST00000293406 NWD1Q149M9 1564 aa23.13■■□□□ 1.29
LSM12-201ENST00000293406 TMEM87AQ8NBN3 555 aa23.13■■□□□ 1.29
LSM12-201ENST00000293406 TTC14Q96N46 770 aa23.12■■□□□ 1.29
LSM12-201ENST00000293406 LSG1Q9H089 658 aaKnown RBP23.12■■□□□ 1.29
LSM12-201ENST00000293406 RGPD8O14715 1765 aaPredicted RBP23.11■■□□□ 1.29
LSM12-201ENST00000293406 FAM184AQ8NB25 1140 aa23.11■■□□□ 1.29
LSM12-201ENST00000293406 NBPF7P0C2Y1 421 aaPredicted RBP23.1■■□□□ 1.29
LSM12-201ENST00000293406 ZSCAN22P10073 491 aaPredicted RBP23.1■■□□□ 1.29
LSM12-201ENST00000293406 EIF2S2P20042 333 aaKnown RBP23.1■■□□□ 1.29
LSM12-201ENST00000293406 AK2P54819 239 aa23.1■■□□□ 1.29
LSM12-201ENST00000293406 VSIG10Q8N0Z9 540 aa23.1■■□□□ 1.29
LSM12-201ENST00000293406 LIMCH1Q9UPQ0 1083 aa23.1■■□□□ 1.29
LSM12-201ENST00000293406 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.1■■□□□ 1.29
LSM12-201ENST00000293406 CCDC183Q5T5S1 534 aa23.09■■□□□ 1.29
LSM12-201ENST00000293406 RASEFQ8IZ41 740 aa23.09■■□□□ 1.29
LSM12-201ENST00000293406 CNPY2Q9Y2B0 182 aa23.09■■□□□ 1.29
LSM12-201ENST00000293406 TBX22Q9Y458 520 aa23.09■■□□□ 1.29
LSM12-201ENST00000293406 UQCRHLA0A096LP55 91 aa23.09■■□□□ 1.29
LSM12-201ENST00000293406 UQCRHP07919 91 aa23.09■■□□□ 1.29
LSM12-201ENST00000293406 UVSSAQ2YD98 709 aa23.09■■□□□ 1.29
LSM12-201ENST00000293406 CWC27Q6UX04 472 aaKnown RBP23.09■■□□□ 1.29
LSM12-201ENST00000293406 RBM10P98175 930 aaKnown RBP23.08■■□□□ 1.29
LSM12-201ENST00000293406 HSP90AB4PQ58FF6 505 aa23.08■■□□□ 1.29
LSM12-201ENST00000293406 RUFY3Q7L099 469 aa23.08■■□□□ 1.29
LSM12-201ENST00000293406 STX6O43752 255 aa23.08■■□□□ 1.28
LSM12-201ENST00000293406 USHBP1Q8N6Y0 703 aa23.08■■□□□ 1.28
LSM12-201ENST00000293406 SYT1P21579 422 aa23.07■■□□□ 1.28
LSM12-201ENST00000293406 ABTB2Q8N961 1025 aa23.07■■□□□ 1.28
LSM12-201ENST00000293406 DNAAF4Q8WXU2 420 aa23.07■■□□□ 1.28
LSM12-201ENST00000293406 LARP6Q9BRS8 491 aaKnown RBP23.07■■□□□ 1.28
LSM12-201ENST00000293406 SPG7Q9UQ90 795 aa23.07■■□□□ 1.28
LSM12-201ENST00000293406 SMC3Q9UQE7 1217 aa23.07■■□□□ 1.28
LSM12-201ENST00000293406 BEND3Q5T5X7 828 aa23.07■■□□□ 1.28
LSM12-201ENST00000293406 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.07■■□□□ 1.28
LSM12-201ENST00000293406 LETM1O95202 739 aaPredicted RBP23.06■■□□□ 1.28
LSM12-201ENST00000293406 UBE2HP62256 183 aa23.06■■□□□ 1.28
LSM12-201ENST00000293406 KIAA2012Q0VF49 1180 aa23.06■■□□□ 1.28
LSM12-201ENST00000293406 CHPF2Q9P2E5 772 aa23.06■■□□□ 1.28
LSM12-201ENST00000293406 PI4KAP2A4QPH2 592 aa23.05■■□□□ 1.28
LSM12-201ENST00000293406 EIF4A1P60842 406 aaKnown RBP23.05■■□□□ 1.28
LSM12-201ENST00000293406 PI4KAP1Q8N8J0 262 aa23.05■■□□□ 1.28
LSM12-201ENST00000293406 ATP6V1DQ9Y5K8 247 aa23.05■■□□□ 1.28
LSM12-201ENST00000293406 CEMIPQ8WUJ3 1361 aa23.05■■□□□ 1.28
LSM12-201ENST00000293406 TTC41PQ6P2S7 1318 aa23.05■■□□□ 1.28
LSM12-201ENST00000293406 GLRX3O76003 335 aaKnown RBP23.05■■□□□ 1.28
LSM12-201ENST00000293406 OS9Q13438 667 aaPredicted RBP23.05■■□□□ 1.28
LSM12-201ENST00000293406 USP42Q9H9J4 1324 aaKnown RBP23.04■■□□□ 1.28
LSM12-201ENST00000293406 F13A1P00488 732 aa23.04■■□□□ 1.28
LSM12-201ENST00000293406 CASTP20810 708 aaKnown RBP23.04■■□□□ 1.28
LSM12-201ENST00000293406 DIAPH3Q9NSV4 1193 aa23.04■■□□□ 1.28
LSM12-201ENST00000293406 FAM13BQ9NYF5 915 aa23.04■■□□□ 1.28
LSM12-201ENST00000293406 TCHHQ07283 1943 aa23.04■■□□□ 1.28
LSM12-201ENST00000293406 HOXB7P09629 217 aa23.04■■□□□ 1.28
LSM12-201ENST00000293406 CEBPAP49715 358 aaPredicted RBP23.04■■□□□ 1.28
LSM12-201ENST00000293406 TPRNQ4KMQ1 711 aa23.04■■□□□ 1.28
LSM12-201ENST00000293406 SASS6Q6UVJ0 657 aa23.04■■□□□ 1.28
LSM12-201ENST00000293406 CHMP4AQ9BY43 222 aa23.04■■□□□ 1.28
LSM12-201ENST00000293406 RUFY2Q8WXA3 655 aa23.03■■□□□ 1.28
LSM12-201ENST00000293406 USP25Q9UHP3 1055 aa23.03■■□□□ 1.28
LSM12-201ENST00000293406 ANKARQ7Z5J8 1434 aa23.03■■□□□ 1.28
LSM12-201ENST00000293406 MARF1Q9Y4F3 1742 aaKnown RBP23.02■■□□□ 1.28
LSM12-201ENST00000293406 CPA1P15085 419 aa23.02■■□□□ 1.28
LSM12-201ENST00000293406 MAP7D2Q96T17 732 aa23.02■■□□□ 1.28
LSM12-201ENST00000293406 HYPKQ9NX55 129 aa23.02■■□□□ 1.28
LSM12-201ENST00000293406 FIBPO43427 364 aa23.02■■□□□ 1.28
LSM12-201ENST00000293406 DYNC1I1O14576 645 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms