RNA–Protein interactions for RNA: ENST00000275080.11

CD164-201, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-201ENST00000275080 CCDC30Q5VVM6 783 aa11.04□□□□□ -0.64
CD164-201ENST00000275080 KLHDC4Q8TBB5 520 aa11.04□□□□□ -0.64
CD164-201ENST00000275080 PKNOX2Q96KN3 472 aa11.04□□□□□ -0.64
CD164-201ENST00000275080 TSPY26PQ9H489 355 aa11.04□□□□□ -0.64
CD164-201ENST00000275080 CPSF1Q10570 1443 aaKnown RBP11.04□□□□□ -0.64
CD164-201ENST00000275080 LARGE1O95461 756 aa11.04□□□□□ -0.64
CD164-201ENST00000275080 PRPF40BQ6NWY9 871 aaKnown RBP11.04□□□□□ -0.64
CD164-201ENST00000275080 SRCIN1Q9C0H9 1055 aa11.04□□□□□ -0.64
CD164-201ENST00000275080 TECPR2O15040 1411 aa11.03□□□□□ -0.64
CD164-201ENST00000275080 PTPRCP08575 1304 aa11.03□□□□□ -0.64
CD164-201ENST00000275080 PRAMEF22A3QJZ6 481 aa11.03□□□□□ -0.64
CD164-201ENST00000275080 OFD1O75665 1012 aa11.03□□□□□ -0.64
CD164-201ENST00000275080 CEBPZQ03701 1054 aaKnown RBP11.03□□□□□ -0.64
CD164-201ENST00000275080 LRRC59Q96AG4 307 aaKnown RBP11.03□□□□□ -0.64
CD164-201ENST00000275080 CHPF2Q9P2E5 772 aa11.03□□□□□ -0.64
CD164-201ENST00000275080 SETD1BQ9UPS6 1966 aaKnown RBP11.03□□□□□ -0.64
CD164-201ENST00000275080 ROBO2Q9HCK4 1378 aa11.03□□□□□ -0.64
CD164-201ENST00000275080 SOS1Q07889 1333 aaPredicted RBP11.03□□□□□ -0.64
CD164-201ENST00000275080 AK2P54819 239 aa11.03□□□□□ -0.64
CD164-201ENST00000275080 NAP1L2Q9ULW6 460 aaPredicted RBP11.03□□□□□ -0.64
CD164-201ENST00000275080 PIK3R4Q99570 1358 aa11.02□□□□□ -0.64
CD164-201ENST00000275080 HAP1P54257 671 aaPredicted RBP11.02□□□□□ -0.64
CD164-201ENST00000275080 DNM1Q05193 864 aaKnown RBP11.02□□□□□ -0.64
CD164-201ENST00000275080 CWF19L2Q2TBE0 894 aaKnown RBP11.02□□□□□ -0.64
CD164-201ENST00000275080 ADCK5Q3MIX3 580 aa11.02□□□□□ -0.64
CD164-201ENST00000275080 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.02□□□□□ -0.64
CD164-201ENST00000275080 CCDC8Q9H0W5 538 aaPredicted RBP11.02□□□□□ -0.64
CD164-201ENST00000275080 TFIP11Q9UBB9 837 aaKnown RBP11.02□□□□□ -0.64
CD164-201ENST00000275080 AMOTL2Q9Y2J4 779 aa11.02□□□□□ -0.64
CD164-201ENST00000275080 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.02□□□□□ -0.641e-9■■■□□ 17.7
CD164-201ENST00000275080 AATKQ6ZMQ8 1374 aa11.02□□□□□ -0.65
CD164-201ENST00000275080 GNAT3A8MTJ3 354 aa11.02□□□□□ -0.65
CD164-201ENST00000275080 GNAI3P08754 354 aa11.02□□□□□ -0.65
CD164-201ENST00000275080 JAKMIP1Q96N16 626 aaKnown RBP11.02□□□□□ -0.65
CD164-201ENST00000275080 SMC3Q9UQE7 1217 aa11.02□□□□□ -0.65
CD164-201ENST00000275080 CDK12Q9NYV4 1490 aaPredicted RBP11.02□□□□□ -0.65
CD164-201ENST00000275080 BRD1O95696 1058 aa11.01□□□□□ -0.65
CD164-201ENST00000275080 ATP8B2P98198 1209 aa11.01□□□□□ -0.65
CD164-201ENST00000275080 EDC3Q96F86 508 aaKnown RBP11.01□□□□□ -0.65
CD164-201ENST00000275080 DIAPH3Q9NSV4 1193 aa11.01□□□□□ -0.65
CD164-201ENST00000275080 NOL7Q9UMY1 257 aaKnown RBP11.01□□□□□ -0.65
CD164-201ENST00000275080 ZKSCAN5Q9Y2L8 839 aa11.01□□□□□ -0.65
CD164-201ENST00000275080 CHGBP05060 677 aa11.01□□□□□ -0.65
CD164-201ENST00000275080 CKAP2LQ8IYA6 745 aa11.01□□□□□ -0.65
CD164-201ENST00000275080 RHPN1Q8TCX5 695 aa11.01□□□□□ -0.65
CD164-201ENST00000275080 C9orf78Q9NZ63 289 aaPredicted RBP11.01□□□□□ -0.65
CD164-201ENST00000275080 RGS12O14924 1447 aa11.01□□□□□ -0.65
CD164-201ENST00000275080 ADCY5O95622 1261 aa11.01□□□□□ -0.65
CD164-201ENST00000275080 PTH1RQ03431 593 aa11.01□□□□□ -0.65
CD164-201ENST00000275080 MON2Q7Z3U7 1717 aa11□□□□□ -0.65
CD164-201ENST00000275080 SYT1P21579 422 aa11□□□□□ -0.65
CD164-201ENST00000275080 IGSF3O75054 1194 aa11□□□□□ -0.65
CD164-201ENST00000275080 DDX11Q96FC9 970 aa10.99□□□□□ -0.65
CD164-201ENST00000275080 BOLA2Q9H3K6 86 aa10.99□□□□□ -0.65
CD164-201ENST00000275080 SNX14Q9Y5W7 946 aa10.99□□□□□ -0.65
CD164-201ENST00000275080 TNRQ92752 1358 aa10.99□□□□□ -0.65
CD164-201ENST00000275080 UBR1Q8IWV7 1749 aa10.99□□□□□ -0.65
CD164-201ENST00000275080 A0A087WWV3 80 aa10.99□□□□□ -0.65
CD164-201ENST00000275080 MYL6BP14649 208 aa10.99□□□□□ -0.65
CD164-201ENST00000275080 FAM227BQ96M60 508 aa10.99□□□□□ -0.65
CD164-201ENST00000275080 LRRC2Q9BYS8 371 aa10.99□□□□□ -0.65
CD164-201ENST00000275080 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.99□□□□□ -0.65
CD164-201ENST00000275080 SRCAPQ6ZRS2 3230 aa10.99□□□□□ -0.65
CD164-201ENST00000275080 TPM2P07951 284 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 GJB2P29033 226 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 TEFQ10587 303 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 PROSER3Q2NL68 480 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 RUFY3Q7L099 469 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 ITSN1Q15811 1721 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 STX6O43752 255 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 MBD3O95983 291 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 DRC7Q8IY82 874 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 TAF6LQ9Y6J9 622 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 AKAP12Q02952 1782 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 KDM4AO75164 1064 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 CLEC17AQ6ZS10 378 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 AACSQ86V21 672 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 CCDC39Q9UFE4 941 aa10.98□□□□□ -0.65
CD164-201ENST00000275080 TMEM2Q9UHN6 1383 aa10.97□□□□□ -0.65
CD164-201ENST00000275080 IFIT2P09913 472 aaKnown RBP10.97□□□□□ -0.65
CD164-201ENST00000275080 KIAA2012Q0VF49 1180 aa10.97□□□□□ -0.65
CD164-201ENST00000275080 SYAP1Q96A49 352 aaPredicted RBP10.97□□□□□ -0.65
CD164-201ENST00000275080 C3P01024 1663 aa10.97□□□□□ -0.65
CD164-201ENST00000275080 WDR33Q9C0J8 1336 aaKnown RBP10.97□□□□□ -0.65
CD164-201ENST00000275080 SLC39A6Q13433 755 aa10.97□□□□□ -0.65
CD164-201ENST00000275080 SPDYE4A6NLX3 237 aa10.96□□□□□ -0.65
CD164-201ENST00000275080 SLFNL1Q499Z3 407 aa10.96□□□□□ -0.65
CD164-201ENST00000275080 CNTROBQ8N137 903 aa10.96□□□□□ -0.65
CD164-201ENST00000275080 GOLGB1Q14789 3259 aaKnown RBP10.96□□□□□ -0.65
CD164-201ENST00000275080 CBX1P83916 185 aa10.96□□□□□ -0.66
CD164-201ENST00000275080 ERCC4Q92889 916 aaPredicted RBP10.96□□□□□ -0.66
CD164-201ENST00000275080 PDCL3Q9H2J4 239 aa10.96□□□□□ -0.66
CD164-201ENST00000275080 PDRG1Q9NUG6 133 aa10.96□□□□□ -0.66
CD164-201ENST00000275080 TLR7Q9NYK1 1049 aaKnown RBP10.96□□□□□ -0.66
CD164-201ENST00000275080 GOLGA6L4A6NEF3 574 aa10.95□□□□□ -0.66
CD164-201ENST00000275080 BTBD11A6QL63 1104 aa10.95□□□□□ -0.66
CD164-201ENST00000275080 CLASRPQ8N2M8 674 aaKnown RBP10.95□□□□□ -0.66
CD164-201ENST00000275080 PDLIM2Q96JY6 352 aa10.95□□□□□ -0.66
CD164-201ENST00000275080 ZHX1Q9UKY1 873 aaPredicted RBP10.95□□□□□ -0.66
CD164-201ENST00000275080 MAP3K2Q9Y2U5 619 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 590.8 ms