RNA–Protein interactions for RNA: ENST00000272139.4

C1orf35-201, Transcript of chromosome 1 open reading frame 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf35, Length 1,427 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf35-201ENST00000272139 CDCA7LQ96GN5 454 aa29.66■■■□□ 2.34
C1orf35-201ENST00000272139 FANCIQ9NVI1 1328 aa29.66■■■□□ 2.34
C1orf35-201ENST00000272139 TJP1Q07157 1748 aa29.65■■■□□ 2.34
C1orf35-201ENST00000272139 GIGYF1O75420 1035 aaPredicted RBP29.65■■■□□ 2.34
C1orf35-201ENST00000272139 SLC16A10Q8TF71 515 aa29.65■■■□□ 2.34
C1orf35-201ENST00000272139 ATF5Q9Y2D1 282 aaPredicted RBP29.65■■■□□ 2.34
C1orf35-201ENST00000272139 PNPLA7Q6ZV29 1317 aa29.63■■■□□ 2.33
C1orf35-201ENST00000272139 STARD3NLO95772 234 aa29.63■■■□□ 2.33
C1orf35-201ENST00000272139 PTGER2P43116 358 aa29.63■■■□□ 2.33
C1orf35-201ENST00000272139 CICQ96RK0 1608 aaPredicted RBP29.63■■■□□ 2.33
C1orf35-201ENST00000272139 COL5A3P25940 1745 aaPredicted RBP29.63■■■□□ 2.33
C1orf35-201ENST00000272139 KRT24Q2M2I5 525 aa29.62■■■□□ 2.33
C1orf35-201ENST00000272139 LINC00116Q8NCU8 138 aa29.62■■■□□ 2.33
C1orf35-201ENST00000272139 TUBGCP6Q96RT7 1819 aa29.62■■■□□ 2.33
C1orf35-201ENST00000272139 PRAMEF22A3QJZ6 481 aa29.62■■■□□ 2.33
C1orf35-201ENST00000272139 USP16Q9Y5T5 823 aa29.62■■■□□ 2.33
C1orf35-201ENST00000272139 ELL2O00472 640 aaPredicted RBP29.6■■■□□ 2.33
C1orf35-201ENST00000272139 CYP19A1P11511 503 aaPredicted RBP29.6■■■□□ 2.33
C1orf35-201ENST00000272139 DUSP27Q5VZP5 1158 aa29.6■■■□□ 2.33
C1orf35-201ENST00000272139 C8orf58Q8NAV2 365 aa29.6■■■□□ 2.33
C1orf35-201ENST00000272139 C4BP0C0L5 1744 aa29.59■■■□□ 2.33
C1orf35-201ENST00000272139 MYH14Q7Z406 1995 aaKnown RBP29.59■■■□□ 2.33
C1orf35-201ENST00000272139 HOXB7P09629 217 aa29.58■■■□□ 2.33
C1orf35-201ENST00000272139 EXOSC9Q06265 439 aaKnown RBP29.58■■■□□ 2.33
C1orf35-201ENST00000272139 TRMT2AQ8IZ69 625 aaKnown RBP29.58■■■□□ 2.33
C1orf35-201ENST00000272139 LAMB4A4D0S4 1761 aa29.58■■■□□ 2.33
C1orf35-201ENST00000272139 CRKLP46109 303 aaKnown RBP29.57■■■□□ 2.32
C1orf35-201ENST00000272139 RC3H1Q5TC82 1133 aaKnown RBP29.57■■■□□ 2.32
C1orf35-201ENST00000272139 FLAD1Q8NFF5 587 aa29.57■■■□□ 2.32
C1orf35-201ENST00000272139 SGIP1Q9BQI5 828 aa29.57■■■□□ 2.32
C1orf35-201ENST00000272139 EIF2S2P20042 333 aaKnown RBP29.56■■■□□ 2.32
C1orf35-201ENST00000272139 AK7Q96M32 723 aa29.56■■■□□ 2.32
C1orf35-201ENST00000272139 CNTNAP4Q9C0A0 1308 aa29.56■■■□□ 2.32
C1orf35-201ENST00000272139 TSPYL6Q8N831 410 aa29.55■■■□□ 2.32
C1orf35-201ENST00000272139 SOS1Q07889 1333 aaPredicted RBP29.55■■■□□ 2.32
C1orf35-201ENST00000272139 TWISTNBQ3B726 338 aaPredicted RBP29.54■■■□□ 2.32
C1orf35-201ENST00000272139 CCDC87Q9NVE4 849 aa29.54■■■□□ 2.32
C1orf35-201ENST00000272139 CHMP4AQ9BY43 222 aa29.54■■■□□ 2.32
C1orf35-201ENST00000272139 MSH5O43196 834 aa29.53■■■□□ 2.32
C1orf35-201ENST00000272139 A1BGP04217 495 aa29.53■■■□□ 2.32
C1orf35-201ENST00000272139 POLD1P28340 1107 aa29.53■■■□□ 2.32
C1orf35-201ENST00000272139 INTS5Q6P9B9 1019 aaKnown RBP29.53■■■□□ 2.32
C1orf35-201ENST00000272139 ARXQ96QS3 562 aa29.52■■■□□ 2.32
C1orf35-201ENST00000272139 GNPATO15228 680 aa29.51■■■□□ 2.31
C1orf35-201ENST00000272139 HDGFL1Q5TGJ6 251 aa29.51■■■□□ 2.31
C1orf35-201ENST00000272139 COL23A1Q86Y22 540 aaPredicted RBP29.51■■■□□ 2.31
C1orf35-201ENST00000272139 NECTIN2Q92692 538 aa29.51■■■□□ 2.31
C1orf35-201ENST00000272139 COL24A1Q17RW2 1714 aa29.5■■■□□ 2.31
C1orf35-201ENST00000272139 CANXP27824 592 aaKnown RBP29.5■■■□□ 2.31
C1orf35-201ENST00000272139 ZBTB1Q9Y2K1 713 aa29.5■■■□□ 2.31
C1orf35-201ENST00000272139 RTCBQ9Y3I0 505 aaKnown RBP29.5■■■□□ 2.31
C1orf35-201ENST00000272139 UBR3Q6ZT12 1888 aa29.5■■■□□ 2.31
C1orf35-201ENST00000272139 RPS6KA4O75676 772 aa29.49■■■□□ 2.31
C1orf35-201ENST00000272139 DCAF8L1A6NGE4 600 aa29.48■■■□□ 2.31
C1orf35-201ENST00000272139 VAMP4O75379 141 aa29.48■■■□□ 2.31
C1orf35-201ENST00000272139 NPM2Q86SE8 214 aaKnown RBP29.47■■■□□ 2.31
C1orf35-201ENST00000272139 ERBB4Q15303 1308 aa29.47■■■□□ 2.31
C1orf35-201ENST00000272139 SSFA2P28290 1259 aa29.46■■■□□ 2.31
C1orf35-201ENST00000272139 CCDC30Q5VVM6 783 aa29.46■■■□□ 2.31
C1orf35-201ENST00000272139 FHDC1Q9C0D6 1143 aaPredicted RBP29.46■■■□□ 2.31
C1orf35-201ENST00000272139 PIP4K2AP48426 406 aaPredicted RBP29.45■■■□□ 2.31
C1orf35-201ENST00000272139 NBPF26B4DH59 902 aa29.45■■■□□ 2.3
C1orf35-201ENST00000272139 IL6STP40189 918 aaPredicted RBP29.45■■■□□ 2.3
C1orf35-201ENST00000272139 NBPF10Q6P3W6 841 aaKnown RBP29.45■■■□□ 2.3
C1orf35-201ENST00000272139 NBPF15Q8N660 670 aa29.45■■■□□ 2.3
C1orf35-201ENST00000272139 CACNA1FO60840 1977 aa29.44■■■□□ 2.3
C1orf35-201ENST00000272139 PHF14O94880 888 aa29.44■■■□□ 2.3
C1orf35-201ENST00000272139 MYL6BP14649 208 aa29.44■■■□□ 2.3
C1orf35-201ENST00000272139 TRAPPC3LQ5T215 181 aa29.44■■■□□ 2.3
C1orf35-201ENST00000272139 DBF4Q9UBU7 674 aaPredicted RBP29.44■■■□□ 2.3
C1orf35-201ENST00000272139 ZNF330Q9Y3S2 320 aaPredicted RBP29.44■■■□□ 2.3
C1orf35-201ENST00000272139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.43■■■□□ 2.3
C1orf35-201ENST00000272139 SYT17Q9BSW7 474 aa29.43■■■□□ 2.3
C1orf35-201ENST00000272139 CHPF2Q9P2E5 772 aa29.43■■■□□ 2.3
C1orf35-201ENST00000272139 CT47B1P0C2W7 299 aaPredicted RBP29.42■■■□□ 2.3
C1orf35-201ENST00000272139 EIF5P55010 431 aaKnown RBP29.42■■■□□ 2.3
C1orf35-201ENST00000272139 SMIM5Q71RC9 77 aa29.42■■■□□ 2.3
C1orf35-201ENST00000272139 STK31Q9BXU1 1019 aa29.42■■■□□ 2.3
C1orf35-201ENST00000272139 DDX21Q9NR30 783 aaKnown RBP eCLIP29.42■■■□□ 2.3
C1orf35-201ENST00000272139 ADRA2BP18089 450 aa29.41■■■□□ 2.3
C1orf35-201ENST00000272139 PDIA6Q15084 440 aa29.41■■■□□ 2.3
C1orf35-201ENST00000272139 AMIGO3Q86WK7 504 aa29.41■■■□□ 2.3
C1orf35-201ENST00000272139 TCERG1O14776 1098 aaKnown RBP29.39■■■□□ 2.3
C1orf35-201ENST00000272139 ANXA1P04083 346 aa29.39■■■□□ 2.3
C1orf35-201ENST00000272139 ZNF428Q96B54 188 aa29.39■■■□□ 2.3
C1orf35-201ENST00000272139 COL15A1P39059 1388 aa29.39■■■□□ 2.29
C1orf35-201ENST00000272139 A0A087WZG4 1122 aa29.38■■■□□ 2.29
C1orf35-201ENST00000272139 PROSER3Q2NL68 480 aa29.38■■■□□ 2.29
C1orf35-201ENST00000272139 ARHGEF1Q92888 912 aaKnown RBP29.38■■■□□ 2.29
C1orf35-201ENST00000272139 HYPKQ9NX55 129 aa29.38■■■□□ 2.29
C1orf35-201ENST00000272139 RFC4P35249 363 aa29.37■■■□□ 2.29
C1orf35-201ENST00000272139 MSL1Q68DK7 614 aa29.37■■■□□ 2.29
C1orf35-201ENST00000272139 SLC4A2P04920 1241 aa29.36■■■□□ 2.29
C1orf35-201ENST00000272139 C4AP0C0L4 1744 aa29.34■■■□□ 2.29
C1orf35-201ENST00000272139 ZPR1O75312 459 aa29.33■■■□□ 2.29
C1orf35-201ENST00000272139 LRP10Q7Z4F1 713 aa29.33■■■□□ 2.29
C1orf35-201ENST00000272139 DZIP3Q86Y13 1208 aaKnown RBP29.33■■■□□ 2.29
C1orf35-201ENST00000272139 KLHL34Q8N239 644 aa29.33■■■□□ 2.29
C1orf35-201ENST00000272139 TBC1D2BQ9UPU7 963 aa29.33■■■□□ 2.29
C1orf35-201ENST00000272139 AIMP1Q12904 312 aaKnown RBP29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms