RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 PIK3R4Q99570 1358 aa18.51■□□□□ 0.55
SHTN1-201ENST00000260777 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
SHTN1-201ENST00000260777 LRP2BPQ9P2M1 347 aa18.51■□□□□ 0.55
SHTN1-201ENST00000260777 GBP3Q9H0R5 595 aa18.51■□□□□ 0.55
SHTN1-201ENST00000260777 PRDM11Q9NQV5 511 aa18.51■□□□□ 0.55
SHTN1-201ENST00000260777 RAI14Q9P0K7 980 aa18.51■□□□□ 0.55
SHTN1-201ENST00000260777 DUOX2Q9NRD8 1548 aa18.51■□□□□ 0.55
SHTN1-201ENST00000260777 LRSAM1Q6UWE0 723 aa18.5■□□□□ 0.55
SHTN1-201ENST00000260777 ADCY5O95622 1261 aa18.5■□□□□ 0.55
SHTN1-201ENST00000260777 CAVIN2O95810 425 aa18.5■□□□□ 0.55
SHTN1-201ENST00000260777 BMP2KQ9NSY1 1161 aaPredicted RBP18.5■□□□□ 0.55
SHTN1-201ENST00000260777 CGNQ9P2M7 1197 aaKnown RBP18.5■□□□□ 0.55
SHTN1-201ENST00000260777 CCDC196A0A1B0GTZ2 297 aa18.49■□□□□ 0.55
SHTN1-201ENST00000260777 IGHMBP2P38935 993 aaKnown RBP18.49■□□□□ 0.55
SHTN1-201ENST00000260777 TAF3Q5VWG9 929 aa18.49■□□□□ 0.55
SHTN1-201ENST00000260777 GSDMDP57764 484 aa18.49■□□□□ 0.55
SHTN1-201ENST00000260777 CKAP2LQ8IYA6 745 aa18.49■□□□□ 0.55
SHTN1-201ENST00000260777 CCDC148Q8NFR7 591 aa18.49■□□□□ 0.55
SHTN1-201ENST00000260777 FANCAO15360 1455 aa18.49■□□□□ 0.55
SHTN1-201ENST00000260777 PIK3C2GO75747 1445 aa18.49■□□□□ 0.55
SHTN1-201ENST00000260777 KIAA0754O94854 1291 aa18.49■□□□□ 0.55
SHTN1-201ENST00000260777 STARD3NLO95772 234 aa18.49■□□□□ 0.55
SHTN1-201ENST00000260777 GDPD2Q9HCC8 539 aa18.49■□□□□ 0.55
SHTN1-201ENST00000260777 CFAP43Q8NDM7 1665 aa18.49■□□□□ 0.55
SHTN1-201ENST00000260777 TMX3Q96JJ7 454 aa18.48■□□□□ 0.55
SHTN1-201ENST00000260777 HMG20BQ9P0W2 317 aa18.48■□□□□ 0.55
SHTN1-201ENST00000260777 SDSP20132 328 aa18.48■□□□□ 0.55
SHTN1-201ENST00000260777 TOP1P11387 765 aaKnown RBP18.48■□□□□ 0.55
SHTN1-201ENST00000260777 TNNT1P13805 278 aa18.48■□□□□ 0.55
SHTN1-201ENST00000260777 EIF5P55010 431 aaKnown RBP18.48■□□□□ 0.55
SHTN1-201ENST00000260777 STX1AQ16623 288 aa18.48■□□□□ 0.55
SHTN1-201ENST00000260777 SKIDA1Q1XH10 827 aa18.48■□□□□ 0.55
SHTN1-201ENST00000260777 PHAXQ9H814 394 aaKnown RBP18.48■□□□□ 0.55
SHTN1-201ENST00000260777 RBM27Q9P2N5 1060 aaKnown RBP18.48■□□□□ 0.55
SHTN1-201ENST00000260777 KDM5BQ9UGL1 1544 aa18.48■□□□□ 0.55
SHTN1-201ENST00000260777 ANAPC15P60006 121 aa18.47■□□□□ 0.55
SHTN1-201ENST00000260777 KIAA1328Q86T90 577 aa18.47■□□□□ 0.55
SHTN1-201ENST00000260777 ZC3H6P61129 1189 aaKnown RBP18.47■□□□□ 0.55
SHTN1-201ENST00000260777 USHBP1Q8N6Y0 703 aa18.47■□□□□ 0.55
SHTN1-201ENST00000260777 CLCN1P35523 988 aa18.47■□□□□ 0.55
SHTN1-201ENST00000260777 ANKRD44Q8N8A2 993 aa18.47■□□□□ 0.55
SHTN1-201ENST00000260777 PPP1R42Q7Z4L9 355 aa18.47■□□□□ 0.55
SHTN1-201ENST00000260777 ARHGEF12Q9NZN5 1544 aa18.46■□□□□ 0.55
SHTN1-201ENST00000260777 FAM83GA6ND36 823 aa18.46■□□□□ 0.55
SHTN1-201ENST00000260777 FSIP1Q8NA03 581 aa18.46■□□□□ 0.55
SHTN1-201ENST00000260777 MRPL50Q8N5N7 158 aaKnown RBP18.46■□□□□ 0.55
SHTN1-201ENST00000260777 CCDC102AQ96A19 550 aa18.46■□□□□ 0.55
SHTN1-201ENST00000260777 ZNF397Q8NF99 534 aaPredicted RBP18.46■□□□□ 0.55
SHTN1-201ENST00000260777 ZSCAN22P10073 491 aaPredicted RBP18.46■□□□□ 0.55
SHTN1-201ENST00000260777 XRCC6P12956 609 aaKnown RBP eCLIP18.46■□□□□ 0.55
SHTN1-201ENST00000260777 ZHX3Q9H4I2 956 aa18.46■□□□□ 0.55
SHTN1-201ENST00000260777 ZNF213O14771 459 aa18.45■□□□□ 0.54
SHTN1-201ENST00000260777 CASQ1P31415 396 aa18.45■□□□□ 0.54
SHTN1-201ENST00000260777 PRIMPOLQ96LW4 560 aa18.45■□□□□ 0.54
SHTN1-201ENST00000260777 KIF5CO60282 957 aa18.45■□□□□ 0.54
SHTN1-201ENST00000260777 CCDC85AQ96PX6 553 aaPredicted RBP18.45■□□□□ 0.54
SHTN1-201ENST00000260777 DYNC1I1O14576 645 aa18.45■□□□□ 0.54
SHTN1-201ENST00000260777 MPRIPQ6WCQ1 1025 aa18.45■□□□□ 0.54
SHTN1-201ENST00000260777 NAPBQ9H115 298 aa18.45■□□□□ 0.54
SHTN1-201ENST00000260777 SPINK5Q9NQ38 1064 aaPredicted RBP18.44■□□□□ 0.54
SHTN1-201ENST00000260777 ATP2B2Q01814 1243 aa18.44■□□□□ 0.54
SHTN1-201ENST00000260777 MAP3K2Q9Y2U5 619 aa18.44■□□□□ 0.54
SHTN1-201ENST00000260777 PHF8Q9UPP1 1060 aa18.44■□□□□ 0.54
SHTN1-201ENST00000260777 PDE1AP54750 535 aa18.44■□□□□ 0.54
SHTN1-201ENST00000260777 GUCY1B3Q02153 619 aa18.44■□□□□ 0.54
SHTN1-201ENST00000260777 PUS7Q96PZ0 661 aaKnown RBP18.43■□□□□ 0.54
SHTN1-201ENST00000260777 URI1O94763 535 aaPredicted RBP18.43■□□□□ 0.54
SHTN1-201ENST00000260777 RHPN1Q8TCX5 695 aa18.43■□□□□ 0.54
SHTN1-201ENST00000260777 LARP6Q9BRS8 491 aaKnown RBP18.43■□□□□ 0.54
SHTN1-201ENST00000260777 CTTNBP2Q8WZ74 1663 aa18.43■□□□□ 0.54
SHTN1-201ENST00000260777 GOLGA8BA8MQT2 603 aa18.43■□□□□ 0.54
SHTN1-201ENST00000260777 ZNF165P49910 485 aa18.43■□□□□ 0.54
SHTN1-201ENST00000260777 CBX1P83916 185 aa18.43■□□□□ 0.54
SHTN1-201ENST00000260777 FBXO31Q5XUX0 539 aaPredicted RBP18.43■□□□□ 0.54
SHTN1-201ENST00000260777 ZSCAN16Q9H4T2 348 aaPredicted RBP18.43■□□□□ 0.54
SHTN1-201ENST00000260777 IFIT5Q13325 482 aaKnown RBP18.43■□□□□ 0.54
SHTN1-201ENST00000260777 C16orf45Q96MC5 204 aaPredicted RBP18.43■□□□□ 0.54
SHTN1-201ENST00000260777 NEK1Q96PY6 1258 aa18.43■□□□□ 0.54
SHTN1-201ENST00000260777 TESK2Q96S53 571 aa18.43■□□□□ 0.54
SHTN1-201ENST00000260777 ESYT1Q9BSJ8 1104 aa18.43■□□□□ 0.54
SHTN1-201ENST00000260777 TFIP11Q9UBB9 837 aaKnown RBP18.43■□□□□ 0.54
SHTN1-201ENST00000260777 NUP153P49790 1475 aaKnown RBP18.43■□□□□ 0.54
SHTN1-201ENST00000260777 MAP3K12Q12852 859 aa18.42■□□□□ 0.54
SHTN1-201ENST00000260777 SMC5Q8IY18 1101 aa18.42■□□□□ 0.54
SHTN1-201ENST00000260777 SLC12A7Q9Y666 1083 aa18.42■□□□□ 0.54
SHTN1-201ENST00000260777 AMOTL2Q9Y2J4 779 aa18.42■□□□□ 0.54
SHTN1-201ENST00000260777 MEIS3Q99687 375 aa18.42■□□□□ 0.54
SHTN1-201ENST00000260777 TSHZ3Q63HK5 1081 aa18.42■□□□□ 0.54
SHTN1-201ENST00000260777 CNNM3Q8NE01 707 aa18.42■□□□□ 0.54
SHTN1-201ENST00000260777 MCM3P25205 808 aa18.42■□□□□ 0.54
SHTN1-201ENST00000260777 SSRP1Q08945 709 aaKnown RBP18.42■□□□□ 0.54
SHTN1-201ENST00000260777 TAF4BQ92750 862 aa18.42■□□□□ 0.54
SHTN1-201ENST00000260777 DENND4BO75064 1496 aaPredicted RBP18.41■□□□□ 0.54
SHTN1-201ENST00000260777 A0A087WZG4 1122 aa18.41■□□□□ 0.54
SHTN1-201ENST00000260777 FAM193AP78312 1265 aa18.41■□□□□ 0.54
SHTN1-201ENST00000260777 CCT2P78371 535 aaKnown RBP18.41■□□□□ 0.54
SHTN1-201ENST00000260777 MAP9Q49MG5 647 aa18.41■□□□□ 0.54
SHTN1-201ENST00000260777 RNF41Q9H4P4 317 aaPredicted RBP18.41■□□□□ 0.54
SHTN1-201ENST00000260777 ABCF2Q9UG63 623 aa18.41■□□□□ 0.54
SHTN1-201ENST00000260777 PI4KAP2A4QPH2 592 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms