RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 C14orf37Q86TY3 774 aa18.65■□□□□ 0.58
PCDHB8-201ENST00000239444 USP44Q9H0E7 712 aa18.65■□□□□ 0.58
PCDHB8-201ENST00000239444 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.65■□□□□ 0.58
PCDHB8-201ENST00000239444 USHBP1Q8N6Y0 703 aa18.65■□□□□ 0.58
PCDHB8-201ENST00000239444 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
PCDHB8-201ENST00000239444 CPA1P15085 419 aa18.65■□□□□ 0.58
PCDHB8-201ENST00000239444 GNAI3P08754 354 aa18.64■□□□□ 0.57
PCDHB8-201ENST00000239444 ZKSCAN5Q9Y2L8 839 aa18.64■□□□□ 0.57
PCDHB8-201ENST00000239444 NLRP6P59044 892 aa18.64■□□□□ 0.57
PCDHB8-201ENST00000239444 CCDC30Q5VVM6 783 aa18.64■□□□□ 0.57
PCDHB8-201ENST00000239444 USP48Q86UV5 1035 aa18.63■□□□□ 0.57
PCDHB8-201ENST00000239444 IL17REQ8NFR9 667 aa18.63■□□□□ 0.57
PCDHB8-201ENST00000239444 FAM13BQ9NYF5 915 aa18.63■□□□□ 0.57
PCDHB8-201ENST00000239444 USP54Q70EL1 1684 aa18.63■□□□□ 0.57
PCDHB8-201ENST00000239444 SURF6O75683 361 aaKnown RBP18.63■□□□□ 0.57
PCDHB8-201ENST00000239444 MBD3O95983 291 aa18.62■□□□□ 0.57
PCDHB8-201ENST00000239444 EIF2S2P20042 333 aaKnown RBP18.62■□□□□ 0.57
PCDHB8-201ENST00000239444 ANXA1P04083 346 aa18.62■□□□□ 0.57
PCDHB8-201ENST00000239444 UBTFL1P0CB47 393 aaPredicted RBP18.62■□□□□ 0.57
PCDHB8-201ENST00000239444 ZNF830Q96NB3 372 aaPredicted RBP18.62■□□□□ 0.57
PCDHB8-201ENST00000239444 PPP1R42Q7Z4L9 355 aa18.61■□□□□ 0.57
PCDHB8-201ENST00000239444 TSPY26PQ9H489 355 aa18.61■□□□□ 0.57
PCDHB8-201ENST00000239444 ZNF500O60304 480 aaPredicted RBP18.61■□□□□ 0.57
PCDHB8-201ENST00000239444 GNAT3A8MTJ3 354 aa18.6■□□□□ 0.57
PCDHB8-201ENST00000239444 PTMAP06454 111 aaKnown RBP18.6■□□□□ 0.57
PCDHB8-201ENST00000239444 MCM2P49736 904 aa18.6■□□□□ 0.57
PCDHB8-201ENST00000239444 RASEFQ8IZ41 740 aa18.6■□□□□ 0.57
PCDHB8-201ENST00000239444 DDX54Q8TDD1 881 aaKnown RBP18.6■□□□□ 0.57
PCDHB8-201ENST00000239444 SRCIN1Q9C0H9 1055 aa18.6■□□□□ 0.57
PCDHB8-201ENST00000239444 CNPY2Q9Y2B0 182 aa18.6■□□□□ 0.57
PCDHB8-201ENST00000239444 HS1BP3Q53T59 392 aa18.6■□□□□ 0.57
PCDHB8-201ENST00000239444 STAP2Q9UGK3 403 aa18.6■□□□□ 0.57
PCDHB8-201ENST00000239444 SPG7Q9UQ90 795 aa18.6■□□□□ 0.57
PCDHB8-201ENST00000239444 UQCRHLA0A096LP55 91 aa18.59■□□□□ 0.57
PCDHB8-201ENST00000239444 UQCRHP07919 91 aa18.59■□□□□ 0.57
PCDHB8-201ENST00000239444 NBPF7P0C2Y1 421 aaPredicted RBP18.59■□□□□ 0.57
PCDHB8-201ENST00000239444 HOXC9P31274 260 aa18.59■□□□□ 0.57
PCDHB8-201ENST00000239444 CHD2O14647 1828 aaKnown RBP18.59■□□□□ 0.57
PCDHB8-201ENST00000239444 HDGFL1Q5TGJ6 251 aa18.59■□□□□ 0.57
PCDHB8-201ENST00000239444 JARID2Q92833 1246 aaPredicted RBP18.59■□□□□ 0.57
PCDHB8-201ENST00000239444 SOS1Q07889 1333 aaPredicted RBP18.59■□□□□ 0.57
PCDHB8-201ENST00000239444 HSPA4P34932 840 aa18.58■□□□□ 0.57
PCDHB8-201ENST00000239444 ANAPC15P60006 121 aa18.58■□□□□ 0.57
PCDHB8-201ENST00000239444 CWC27Q6UX04 472 aaKnown RBP18.58■□□□□ 0.57
PCDHB8-201ENST00000239444 INTS4Q96HW7 963 aaKnown RBP18.58■□□□□ 0.57
PCDHB8-201ENST00000239444 FAM208AQ9UK61 1670 aaKnown RBP18.58■□□□□ 0.57
PCDHB8-201ENST00000239444 SETD1BQ9UPS6 1966 aaKnown RBP18.58■□□□□ 0.57
PCDHB8-201ENST00000239444 NWD1Q149M9 1564 aa18.58■□□□□ 0.57
PCDHB8-201ENST00000239444 RPAP1Q9BWH6 1393 aaPredicted RBP18.58■□□□□ 0.57
PCDHB8-201ENST00000239444 PODXL2Q9NZ53 605 aa18.58■□□□□ 0.56
PCDHB8-201ENST00000239444 SRGAP3O43295 1099 aa18.58■□□□□ 0.56
PCDHB8-201ENST00000239444 ABTB2Q8N961 1025 aa18.58■□□□□ 0.56
PCDHB8-201ENST00000239444 PI4K2BQ8TCG2 481 aa18.58■□□□□ 0.56
PCDHB8-201ENST00000239444 LARGE1O95461 756 aa18.57■□□□□ 0.56
PCDHB8-201ENST00000239444 RHPN1Q8TCX5 695 aa18.57■□□□□ 0.56
PCDHB8-201ENST00000239444 USP25Q9UHP3 1055 aa18.57■□□□□ 0.56
PCDHB8-201ENST00000239444 SNX14Q9Y5W7 946 aa18.57■□□□□ 0.56
PCDHB8-201ENST00000239444 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.57■□□□□ 0.56
PCDHB8-201ENST00000239444 LRRC37A3O60309 1634 aa18.57■□□□□ 0.56
PCDHB8-201ENST00000239444 AK2P54819 239 aa18.57■□□□□ 0.56
PCDHB8-201ENST00000239444 C17orf53Q8N3J3 647 aaPredicted RBP18.57■□□□□ 0.56
PCDHB8-201ENST00000239444 CCDC39Q9UFE4 941 aa18.57■□□□□ 0.56
PCDHB8-201ENST00000239444 SSH3Q8TE77 659 aa18.56■□□□□ 0.56
PCDHB8-201ENST00000239444 FIBPO43427 364 aa18.55■□□□□ 0.56
PCDHB8-201ENST00000239444 HTATSF1O43719 755 aaKnown RBP18.55■□□□□ 0.56
PCDHB8-201ENST00000239444 KCNQ3O43525 872 aa18.55■□□□□ 0.56
PCDHB8-201ENST00000239444 HCLS1P14317 486 aaPredicted RBP18.55■□□□□ 0.56
PCDHB8-201ENST00000239444 ANKLE2Q86XL3 938 aa18.55■□□□□ 0.56
PCDHB8-201ENST00000239444 PDCL3Q9H2J4 239 aa18.55■□□□□ 0.56
PCDHB8-201ENST00000239444 WDR33Q9C0J8 1336 aaKnown RBP18.55■□□□□ 0.56
PCDHB8-201ENST00000239444 SGSM2O43147 1006 aa18.54■□□□□ 0.56
PCDHB8-201ENST00000239444 RUFY3Q7L099 469 aa18.54■□□□□ 0.56
PCDHB8-201ENST00000239444 ZNF142P52746 1687 aaPredicted RBP18.54■□□□□ 0.56
PCDHB8-201ENST00000239444 TAF7Q15545 349 aaPredicted RBP18.54■□□□□ 0.56
PCDHB8-201ENST00000239444 DNAJC5Q9H3Z4 198 aa18.54■□□□□ 0.56
PCDHB8-201ENST00000239444 PHF8Q9UPP1 1060 aa18.54■□□□□ 0.56
PCDHB8-201ENST00000239444 PLCB2Q00722 1185 aa18.53■□□□□ 0.56
PCDHB8-201ENST00000239444 RAD50Q92878 1312 aa18.53■□□□□ 0.56
PCDHB8-201ENST00000239444 COL9A3Q14050 684 aaPredicted RBP18.53■□□□□ 0.56
PCDHB8-201ENST00000239444 LSG1Q9H089 658 aaKnown RBP18.53■□□□□ 0.56
PCDHB8-201ENST00000239444 LGR6Q9HBX8 967 aa18.53■□□□□ 0.56
PCDHB8-201ENST00000239444 CHPF2Q9P2E5 772 aa18.53■□□□□ 0.56
PCDHB8-201ENST00000239444 SYT1P21579 422 aa18.52■□□□□ 0.56
PCDHB8-201ENST00000239444 TSC1Q92574 1164 aa18.52■□□□□ 0.56
PCDHB8-201ENST00000239444 SYAP1Q96A49 352 aaPredicted RBP18.52■□□□□ 0.56
PCDHB8-201ENST00000239444 TTC12Q9H892 705 aaPredicted RBP18.52■□□□□ 0.56
PCDHB8-201ENST00000239444 MAP3K5Q99683 1374 aa18.52■□□□□ 0.56
PCDHB8-201ENST00000239444 PI4KAP2A4QPH2 592 aa18.52■□□□□ 0.56
PCDHB8-201ENST00000239444 CASTP20810 708 aaKnown RBP18.52■□□□□ 0.56
PCDHB8-201ENST00000239444 ADCK5Q3MIX3 580 aa18.52■□□□□ 0.56
PCDHB8-201ENST00000239444 PI4KAP1Q8N8J0 262 aa18.52■□□□□ 0.56
PCDHB8-201ENST00000239444 TTC14Q96N46 770 aa18.52■□□□□ 0.56
PCDHB8-201ENST00000239444 LTN1O94822 1766 aa18.52■□□□□ 0.56
PCDHB8-201ENST00000239444 CCDC83Q8IWF9 413 aa18.51■□□□□ 0.55
PCDHB8-201ENST00000239444 PTH1RQ03431 593 aa18.51■□□□□ 0.55
PCDHB8-201ENST00000239444 STX6O43752 255 aa18.5■□□□□ 0.55
PCDHB8-201ENST00000239444 ZSCAN22P10073 491 aaPredicted RBP18.5■□□□□ 0.55
PCDHB8-201ENST00000239444 OS9Q13438 667 aaPredicted RBP18.5■□□□□ 0.55
PCDHB8-201ENST00000239444 GIMAP6Q6P9H5 292 aa18.5■□□□□ 0.55
PCDHB8-201ENST00000239444 PA2G4Q9UQ80 394 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms