RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 CCT4P50991 539 aaKnown RBP11.62□□□□□ -0.55
TUBB1-201ENST00000217133 FKBP5Q13451 457 aaPredicted RBP11.62□□□□□ -0.55
TUBB1-201ENST00000217133 PRR36Q9H6K5 1346 aa11.62□□□□□ -0.55
TUBB1-201ENST00000217133 UBE2HP62256 183 aa11.62□□□□□ -0.55
TUBB1-201ENST00000217133 GIMAP6Q6P9H5 292 aa11.62□□□□□ -0.55
TUBB1-201ENST00000217133 SMC3Q9UQE7 1217 aa11.62□□□□□ -0.55
TUBB1-201ENST00000217133 GTF2F1P35269 517 aaKnown RBP eCLIP11.61□□□□□ -0.55
TUBB1-201ENST00000217133 AEBP1Q8IUX7 1158 aa11.61□□□□□ -0.55
TUBB1-201ENST00000217133 MIS18AQ9NYP9 233 aa11.61□□□□□ -0.55
TUBB1-201ENST00000217133 CHL1O00533 1208 aa11.61□□□□□ -0.55
TUBB1-201ENST00000217133 ZSCAN22P10073 491 aaPredicted RBP11.61□□□□□ -0.55
TUBB1-201ENST00000217133 GTPBP4Q9BZE4 634 aaKnown RBP11.61□□□□□ -0.55
TUBB1-201ENST00000217133 RGS12O14924 1447 aa11.61□□□□□ -0.55
TUBB1-201ENST00000217133 TPM3P06753 285 aa11.61□□□□□ -0.55
TUBB1-201ENST00000217133 LARP6Q9BRS8 491 aaKnown RBP11.61□□□□□ -0.55
TUBB1-201ENST00000217133 STK31Q9BXU1 1019 aa11.61□□□□□ -0.55
TUBB1-201ENST00000217133 CDC42BPGQ6DT37 1551 aa11.6□□□□□ -0.55
TUBB1-201ENST00000217133 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.6□□□□□ -0.55
TUBB1-201ENST00000217133 KNDC1Q76NI1 1749 aa11.6□□□□□ -0.55
TUBB1-201ENST00000217133 SOX12O15370 315 aa11.6□□□□□ -0.55
TUBB1-201ENST00000217133 STX6O43752 255 aa11.6□□□□□ -0.55
TUBB1-201ENST00000217133 ATP2B3Q16720 1220 aa11.6□□□□□ -0.55
TUBB1-201ENST00000217133 G2E3Q7L622 706 aa11.6□□□□□ -0.55
TUBB1-201ENST00000217133 SPTLC3Q9NUV7 552 aa11.6□□□□□ -0.55
TUBB1-201ENST00000217133 CPSF1Q10570 1443 aaKnown RBP11.6□□□□□ -0.55
TUBB1-201ENST00000217133 RIOK3O14730 519 aaKnown RBP11.59□□□□□ -0.55
TUBB1-201ENST00000217133 RTF1Q92541 710 aaKnown RBP11.59□□□□□ -0.55
TUBB1-201ENST00000217133 GNAI3P08754 354 aa11.59□□□□□ -0.55
TUBB1-201ENST00000217133 DRC7Q8IY82 874 aa11.59□□□□□ -0.55
TUBB1-201ENST00000217133 TSPYL4Q9UJ04 414 aa11.59□□□□□ -0.55
TUBB1-201ENST00000217133 IL1RAPL2Q9NP60 686 aa11.59□□□□□ -0.55
TUBB1-201ENST00000217133 CCDC61Q9Y6R9 512 aa11.59□□□□□ -0.55
TUBB1-201ENST00000217133 MAP4K4O95819 1239 aaPredicted RBP11.58□□□□□ -0.56
TUBB1-201ENST00000217133 SYT1P21579 422 aa11.58□□□□□ -0.56
TUBB1-201ENST00000217133 TMEM87AQ8NBN3 555 aa11.58□□□□□ -0.56
TUBB1-201ENST00000217133 PYCARDQ9ULZ3 195 aa11.58□□□□□ -0.56
TUBB1-201ENST00000217133 CHMP3Q9Y3E7 222 aa11.58□□□□□ -0.56
TUBB1-201ENST00000217133 KIAA1524Q8TCG1 905 aa11.58□□□□□ -0.56
TUBB1-201ENST00000217133 SETD1AO15047 1707 aaKnown RBP11.58□□□□□ -0.56
TUBB1-201ENST00000217133 ANKRD26Q9UPS8 1709 aa11.58□□□□□ -0.56
TUBB1-201ENST00000217133 VPS37CA5D8V6 355 aaPredicted RBP11.58□□□□□ -0.56
TUBB1-201ENST00000217133 F13A1P00488 732 aa11.58□□□□□ -0.56
TUBB1-201ENST00000217133 CCDC192P0DO97 292 aa11.58□□□□□ -0.56
TUBB1-201ENST00000217133 NUTM2GQ5VZR2 741 aa11.58□□□□□ -0.56
TUBB1-201ENST00000217133 UNC5CLQ8IV45 518 aa11.58□□□□□ -0.56
TUBB1-201ENST00000217133 DDX17Q92841 729 aaKnown RBP11.58□□□□□ -0.56
TUBB1-201ENST00000217133 KIAA0232Q92628 1395 aa11.57□□□□□ -0.56
TUBB1-201ENST00000217133 U2AF2P26368 475 aaKnown RBP eCLIP11.57□□□□□ -0.56
TUBB1-201ENST00000217133 ORAI2Q96SN7 254 aa11.57□□□□□ -0.56
TUBB1-201ENST00000217133 LIMCH1Q9UPQ0 1083 aa11.57□□□□□ -0.56
TUBB1-201ENST00000217133 SSH2Q76I76 1423 aa11.57□□□□□ -0.56
TUBB1-201ENST00000217133 PNMA6EA0A0J9YXQ4 647 aa11.57□□□□□ -0.56
TUBB1-201ENST00000217133 ESCO1Q5FWF5 840 aa11.57□□□□□ -0.56
TUBB1-201ENST00000217133 NUTM1Q86Y26 1132 aa11.57□□□□□ -0.56
TUBB1-201ENST00000217133 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
TUBB1-201ENST00000217133 CDK12Q9NYV4 1490 aaPredicted RBP11.57□□□□□ -0.56
TUBB1-201ENST00000217133 KIF20AO95235 890 aa11.56□□□□□ -0.56
TUBB1-201ENST00000217133 HSPA4P34932 840 aa11.56□□□□□ -0.56
TUBB1-201ENST00000217133 IGSF3O75054 1194 aa11.56□□□□□ -0.56
TUBB1-201ENST00000217133 AK2P54819 239 aa11.56□□□□□ -0.56
TUBB1-201ENST00000217133 DNM1Q05193 864 aaKnown RBP11.56□□□□□ -0.56
TUBB1-201ENST00000217133 TECPR2O15040 1411 aa11.56□□□□□ -0.56
TUBB1-201ENST00000217133 ATP8B2P98198 1209 aa11.56□□□□□ -0.56
TUBB1-201ENST00000217133 EIF4A2Q14240 407 aaKnown RBP11.56□□□□□ -0.56
TUBB1-201ENST00000217133 NGDNQ8NEJ9 315 aaKnown RBP11.56□□□□□ -0.56
TUBB1-201ENST00000217133 TMEM94Q12767 1356 aa11.55□□□□□ -0.56
TUBB1-201ENST00000217133 ZNF771Q7L3S4 317 aaPredicted RBP11.55□□□□□ -0.56
TUBB1-201ENST00000217133 CCDC83Q8IWF9 413 aa11.55□□□□□ -0.56
TUBB1-201ENST00000217133 LRRFIP2Q9Y608 721 aaKnown RBP11.55□□□□□ -0.56
TUBB1-201ENST00000217133 EDC4Q6P2E9 1401 aaKnown RBP11.55□□□□□ -0.56
TUBB1-201ENST00000217133 ZNF142P52746 1687 aaPredicted RBP11.55□□□□□ -0.56
TUBB1-201ENST00000217133 RPAP1Q9BWH6 1393 aaPredicted RBP11.55□□□□□ -0.56
TUBB1-201ENST00000217133 GOLGA6L4A6NEF3 574 aa11.55□□□□□ -0.56
TUBB1-201ENST00000217133 FOXO3O43524 673 aa11.55□□□□□ -0.56
TUBB1-201ENST00000217133 DTNBO60941 627 aa11.55□□□□□ -0.56
TUBB1-201ENST00000217133 SIRT1Q96EB6 747 aa11.55□□□□□ -0.56
TUBB1-201ENST00000217133 ACEP12821 1306 aa11.55□□□□□ -0.56
TUBB1-201ENST00000217133 ATP7BP35670 1465 aa11.55□□□□□ -0.56
TUBB1-201ENST00000217133 AATKQ6ZMQ8 1374 aa11.55□□□□□ -0.56
TUBB1-201ENST00000217133 KCNF1Q9H3M0 494 aa11.55□□□□□ -0.56
TUBB1-201ENST00000217133 SURF6O75683 361 aaKnown RBP11.54□□□□□ -0.56
TUBB1-201ENST00000217133 PTGS1P23219 599 aa11.54□□□□□ -0.56
TUBB1-201ENST00000217133 STAP2Q9UGK3 403 aa11.54□□□□□ -0.56
TUBB1-201ENST00000217133 SNX14Q9Y5W7 946 aa11.54□□□□□ -0.56
TUBB1-201ENST00000217133 SALL3Q9BXA9 1300 aa11.54□□□□□ -0.56
TUBB1-201ENST00000217133 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
TUBB1-201ENST00000217133 GJB2P29033 226 aa11.54□□□□□ -0.56
TUBB1-201ENST00000217133 UBTFL1P0CB47 393 aaPredicted RBP11.54□□□□□ -0.56
TUBB1-201ENST00000217133 LMOD2Q6P5Q4 547 aa11.54□□□□□ -0.56
TUBB1-201ENST00000217133 C16orf45Q96MC5 204 aaPredicted RBP11.54□□□□□ -0.56
TUBB1-201ENST00000217133 IL25Q9H293 177 aa11.54□□□□□ -0.56
TUBB1-201ENST00000217133 KIF20BQ96Q89 1820 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 CPA1P15085 419 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 FLIIQ13045 1269 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 CAMK4Q16566 473 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 CWC27Q6UX04 472 aaKnown RBP11.53□□□□□ -0.56
TUBB1-201ENST00000217133 CNTROBQ8N137 903 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 FAM200AQ8TCP9 573 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 RAD50Q92878 1312 aa11.53□□□□□ -0.56
TUBB1-201ENST00000217133 MAP2P11137 1827 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms