RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 IL1RAPL2Q9NP60 686 aa16.12■□□□□ 0.17
SRP54-201ENST00000216774 PLEKHG5O94827 1062 aa16.12■□□□□ 0.17
SRP54-201ENST00000216774 PI4K2BQ8TCG2 481 aa16.12■□□□□ 0.17
SRP54-201ENST00000216774 SYAP1Q96A49 352 aaPredicted RBP16.12■□□□□ 0.17
SRP54-201ENST00000216774 RAD50Q92878 1312 aa16.11■□□□□ 0.17
SRP54-201ENST00000216774 WDR33Q9C0J8 1336 aaKnown RBP16.11■□□□□ 0.17
SRP54-201ENST00000216774 SYCE3A1L190 88 aa16.11■□□□□ 0.17
SRP54-201ENST00000216774 TPM2P07951 284 aa16.11■□□□□ 0.17
SRP54-201ENST00000216774 HSP90AB4PQ58FF6 505 aa16.11■□□□□ 0.17
SRP54-201ENST00000216774 NOL7Q9UMY1 257 aaKnown RBP16.11■□□□□ 0.17
SRP54-201ENST00000216774 SGSM2O43147 1006 aa16.11■□□□□ 0.17
SRP54-201ENST00000216774 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
SRP54-201ENST00000216774 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
SRP54-201ENST00000216774 UBE2Q2Q8WVN8 375 aa16.11■□□□□ 0.17
SRP54-201ENST00000216774 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
SRP54-201ENST00000216774 UPF3BQ9BZI7 483 aaKnown RBP16.11■□□□□ 0.17
SRP54-201ENST00000216774 NSFL1CQ9UNZ2 370 aaKnown RBP16.11■□□□□ 0.17
SRP54-201ENST00000216774 SRGAP3O43295 1099 aa16.1■□□□□ 0.17
SRP54-201ENST00000216774 OFD1O75665 1012 aa16.1■□□□□ 0.17
SRP54-201ENST00000216774 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
SRP54-201ENST00000216774 FOXD4L5Q5VV16 416 aaPredicted RBP16.1■□□□□ 0.17
SRP54-201ENST00000216774 FOXD4L4Q8WXT5 416 aaPredicted RBP16.1■□□□□ 0.17
SRP54-201ENST00000216774 CHAMP1Q96JM3 812 aa16.1■□□□□ 0.17
SRP54-201ENST00000216774 KDM3BQ7LBC6 1761 aa16.1■□□□□ 0.17
SRP54-201ENST00000216774 USP42Q9H9J4 1324 aaKnown RBP16.1■□□□□ 0.17
SRP54-201ENST00000216774 CRYBG1Q9Y4K1 1723 aa16.1■□□□□ 0.17
SRP54-201ENST00000216774 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
SRP54-201ENST00000216774 IP6K1Q92551 441 aa16.1■□□□□ 0.17
SRP54-201ENST00000216774 IL25Q9H293 177 aa16.1■□□□□ 0.17
SRP54-201ENST00000216774 LTN1O94822 1766 aa16.09■□□□□ 0.17
SRP54-201ENST00000216774 KCNA6P17658 529 aa16.09■□□□□ 0.17
SRP54-201ENST00000216774 BEND3Q5T5X7 828 aa16.09■□□□□ 0.17
SRP54-201ENST00000216774 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
SRP54-201ENST00000216774 DNAAF4Q8WXU2 420 aa16.09■□□□□ 0.17
SRP54-201ENST00000216774 PHF14O94880 888 aa16.08■□□□□ 0.17
SRP54-201ENST00000216774 MCM5P33992 734 aa16.08■□□□□ 0.17
SRP54-201ENST00000216774 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.08■□□□□ 0.17
SRP54-201ENST00000216774 NOL8Q76FK4 1167 aaKnown RBP16.08■□□□□ 0.17
SRP54-201ENST00000216774 NFAT5O94916 1531 aa16.08■□□□□ 0.16
SRP54-201ENST00000216774 RRP9O43818 475 aaKnown RBP16.08■□□□□ 0.16
SRP54-201ENST00000216774 ZNF500O60304 480 aaPredicted RBP16.08■□□□□ 0.16
SRP54-201ENST00000216774 ADGRL3Q9HAR2 1447 aa16.08■□□□□ 0.16
SRP54-201ENST00000216774 TTC41PQ6P2S7 1318 aa16.08■□□□□ 0.16
SRP54-201ENST00000216774 NBPF7P0C2Y1 421 aaPredicted RBP16.07■□□□□ 0.16
SRP54-201ENST00000216774 TERF1P54274 439 aa16.07■□□□□ 0.16
SRP54-201ENST00000216774 USHBP1Q8N6Y0 703 aa16.07■□□□□ 0.16
SRP54-201ENST00000216774 TMEM87AQ8NBN3 555 aa16.07■□□□□ 0.16
SRP54-201ENST00000216774 LSG1Q9H089 658 aaKnown RBP16.07■□□□□ 0.16
SRP54-201ENST00000216774 TTC14Q96N46 770 aa16.07■□□□□ 0.16
SRP54-201ENST00000216774 CHPF2Q9P2E5 772 aa16.07■□□□□ 0.16
SRP54-201ENST00000216774 SNX14Q9Y5W7 946 aa16.07■□□□□ 0.16
SRP54-201ENST00000216774 LMO7Q8WWI1 1683 aa16.07■□□□□ 0.16
SRP54-201ENST00000216774 EIF2S2P20042 333 aaKnown RBP16.06■□□□□ 0.16
SRP54-201ENST00000216774 MTX1Q13505 466 aa16.06■□□□□ 0.16
SRP54-201ENST00000216774 TSPY26PQ9H489 355 aa16.06■□□□□ 0.16
SRP54-201ENST00000216774 PHRF1Q9P1Y6 1649 aaKnown RBP16.06■□□□□ 0.16
SRP54-201ENST00000216774 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
SRP54-201ENST00000216774 GLRX3O76003 335 aaKnown RBP16.06■□□□□ 0.16
SRP54-201ENST00000216774 KIAA1211Q6ZU35 1233 aa16.06■□□□□ 0.16
SRP54-201ENST00000216774 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
SRP54-201ENST00000216774 FER1L4A9Z1Z3 1794 aa16.05■□□□□ 0.16
SRP54-201ENST00000216774 RPAP1Q9BWH6 1393 aaPredicted RBP16.05■□□□□ 0.16
SRP54-201ENST00000216774 CCDC39Q9UFE4 941 aa16.05■□□□□ 0.16
SRP54-201ENST00000216774 PHF8Q9UPP1 1060 aa16.05■□□□□ 0.16
SRP54-201ENST00000216774 MAP4K4O95819 1239 aaPredicted RBP16.05■□□□□ 0.16
SRP54-201ENST00000216774 NBPF6Q5VWK0 638 aa16.05■□□□□ 0.16
SRP54-201ENST00000216774 NBPF4Q96M43 638 aa16.05■□□□□ 0.16
SRP54-201ENST00000216774 LGR6Q9HBX8 967 aa16.05■□□□□ 0.16
SRP54-201ENST00000216774 ZKSCAN5Q9Y2L8 839 aa16.05■□□□□ 0.16
SRP54-201ENST00000216774 ADCY9O60503 1353 aa16.04■□□□□ 0.16
SRP54-201ENST00000216774 OVOS2A0A0G2JMS6 1433 aa16.04■□□□□ 0.16
SRP54-201ENST00000216774 AKAP4Q5JQC9 854 aa16.04■□□□□ 0.16
SRP54-201ENST00000216774 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
SRP54-201ENST00000216774 RUFY2Q8WXA3 655 aa16.04■□□□□ 0.16
SRP54-201ENST00000216774 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.04■□□□□ 0.16
SRP54-201ENST00000216774 LIMCH1Q9UPQ0 1083 aa16.04■□□□□ 0.16
SRP54-201ENST00000216774 HDAC5Q9UQL6 1122 aa16.04■□□□□ 0.16
SRP54-201ENST00000216774 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.04■□□□□ 0.16
SRP54-201ENST00000216774 NCAPD2Q15021 1401 aa16.04■□□□□ 0.16
SRP54-201ENST00000216774 TEFQ10587 303 aa16.03■□□□□ 0.16
SRP54-201ENST00000216774 HSP90AA2PQ14568 343 aaPredicted RBP16.03■□□□□ 0.16
SRP54-201ENST00000216774 DBF4Q9UBU7 674 aaPredicted RBP16.03■□□□□ 0.16
SRP54-201ENST00000216774 ALDH1L1O75891 902 aa16.03■□□□□ 0.16
SRP54-201ENST00000216774 C14orf37Q86TY3 774 aa16.03■□□□□ 0.16
SRP54-201ENST00000216774 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
SRP54-201ENST00000216774 FAM184AQ8NB25 1140 aa16.03■□□□□ 0.16
SRP54-201ENST00000216774 KCNH5Q8NCM2 988 aa16.03■□□□□ 0.16
SRP54-201ENST00000216774 BTBD11A6QL63 1104 aa16.02■□□□□ 0.16
SRP54-201ENST00000216774 ZSCAN22P10073 491 aaPredicted RBP16.02■□□□□ 0.16
SRP54-201ENST00000216774 AK2P54819 239 aa16.02■□□□□ 0.16
SRP54-201ENST00000216774 AMOTQ4VCS5 1084 aa16.02■□□□□ 0.15
SRP54-201ENST00000216774 PLEKHO1Q53GL0 409 aaPredicted RBP16.02■□□□□ 0.15
SRP54-201ENST00000216774 CWC27Q6UX04 472 aaKnown RBP16.02■□□□□ 0.15
SRP54-201ENST00000216774 RUFY3Q7L099 469 aa16.02■□□□□ 0.15
SRP54-201ENST00000216774 ERC1Q8IUD2 1116 aa16.02■□□□□ 0.15
SRP54-201ENST00000216774 RASEFQ8IZ41 740 aa16.02■□□□□ 0.15
SRP54-201ENST00000216774 CLASRPQ8N2M8 674 aaKnown RBP16.02■□□□□ 0.15
SRP54-201ENST00000216774 GPATCH3Q96I76 525 aa16.02■□□□□ 0.15
SRP54-201ENST00000216774 DIAPH3Q9NSV4 1193 aa16.02■□□□□ 0.15
SRP54-201ENST00000216774 GADD45BO75293 160 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms