RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Ccdc102aQ3TMW1 549 aa15.53■□□□□ 0.08
Rnf40-202ENSMUST00000205694 AdgbG3UZ78 1657 aa15.53■□□□□ 0.08
Rnf40-202ENSMUST00000205694 ScaperF8VQ70 1398 aaKnown RBP15.53■□□□□ 0.08
Rnf40-202ENSMUST00000205694 ItpripQ3TNL8 555 aa15.53■□□□□ 0.08
Rnf40-202ENSMUST00000205694 Golim4Q8BXA1 655 aa15.53■□□□□ 0.08
Rnf40-202ENSMUST00000205694 Dnaaf4Q8R368 420 aa15.53■□□□□ 0.08
Rnf40-202ENSMUST00000205694 Mipol1Q9D9F8 279 aa15.53■□□□□ 0.08
Rnf40-202ENSMUST00000205694 Znf287Q9EQB9 759 aa15.53■□□□□ 0.08
Rnf40-202ENSMUST00000205694 Cdk13Q69ZA1 1511 aaKnown RBP15.53■□□□□ 0.08
Rnf40-202ENSMUST00000205694 Wdhd1P59328 1117 aa15.52■□□□□ 0.08
Rnf40-202ENSMUST00000205694 Nol7Q9D7Z3 254 aaKnown RBP15.52■□□□□ 0.08
Rnf40-202ENSMUST00000205694 Ccdc172Q810N9 267 aa15.52■□□□□ 0.08
Rnf40-202ENSMUST00000205694 Sugp2Q8CH09 1067 aa15.52■□□□□ 0.08
Rnf40-202ENSMUST00000205694 Asxl2Q8BZ32 1370 aa15.52■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Vps37dQ810I0 261 aa15.52■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Nap1l5Q9JJF0 156 aa15.52■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Kiaa0556Q8C753 1610 aa15.52■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Rrp9Q91WM3 475 aaKnown RBP15.51■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Podxl2Q8CAE9 603 aa15.51■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Themis2Q91YX0 663 aa15.51■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Nphp4P59240 1425 aa15.51■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Hs1bp3Q3TC93 395 aa15.51■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Ripk4Q9ERK0 786 aa15.51■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Elp1Q7TT37 1333 aaKnown RBP15.51■□□□□ 0.07
Rnf40-202ENSMUST00000205694 EappQ5BU09 281 aa15.51■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Samm50Q8BGH2 469 aa15.51■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Tnni2P13412 182 aa15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Lrrfip2Q91WK0 415 aa15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Gnl2Q99LH1 728 aaKnown RBP15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 AnkarA2RT91 1465 aa15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Frmpd2A0A140LI67 1392 aa15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Hmgb2P30681 210 aaKnown RBP15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Gas2l3Q3UWW6 683 aa15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Ccar2Q8VDP4 922 aaKnown RBP15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Cdc42bpgQ80UW5 1551 aa15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Myom2Q14BI5 1463 aa15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Bicdl1A0JNT9 577 aa15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Pcdh10E9PXQ7 1057 aa15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Tom1O88746 492 aa15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Prkar2bP31324 416 aa15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Ssr1Q9CY50 286 aaKnown RBP15.5■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Pprc1Q6NZN1 1644 aa15.49■□□□□ 0.07
Rnf40-202ENSMUST00000205694 NinlQ6ZQ12 1394 aa15.49■□□□□ 0.07
Rnf40-202ENSMUST00000205694 MycnP03966 462 aaKnown RBP15.49■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Ppp1r42Q8R1Z4 357 aa15.49■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Zmym3Q9JLM4 1370 aa15.49■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Gjb2Q00977 226 aa15.49■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Plekhm2Q80TQ5 1018 aa15.49■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Trim11Q99PQ2 467 aa15.49■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Slc7a3P70423 618 aa15.49■□□□□ 0.07
Rnf40-202ENSMUST00000205694 GpkowQ56A08 488 aa15.48■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Slu7Q8BHJ9 585 aa15.48■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Pof1bQ8K4L4 587 aa15.48■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Cep55Q8BT07 462 aa15.48■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Hoxb7P09024 217 aa15.48■□□□□ 0.07
Rnf40-202ENSMUST00000205694 NapbP28663 298 aa15.48■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Wdr33Q8K4P0 1330 aaKnown RBP15.48■□□□□ 0.07
Rnf40-202ENSMUST00000205694 TxlnaQ6PAM1 554 aaKnown RBP15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Ccdc178Q8CDV0 866 aa15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Rapgef3Q8VCC8 918 aa15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 SrrtQ99MR6 875 aaKnown RBP15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Tspyl2Q7TQI8 677 aa15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Jmjd4Q8BFT6 427 aa15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Ttc37F8VPK0 1563 aa15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 AcrbpQ3V140 540 aa15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Gbp4Q61107 620 aa15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Slc5a1Q8C3K6 665 aa15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Nup133Q8R0G9 1155 aa15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Rbm10Q99KG3 930 aaKnown RBP15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Bag3Q9JLV1 577 aaKnown RBP15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Setbp1Q9Z180 1582 aa15.47■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Ddx58Q6Q899 926 aa15.46■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Kdm4aQ8BW72 1064 aa15.46■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Secisbp2lQ6A098 1086 aaKnown RBP15.46■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Dmrt2Q8BG36 561 aa15.46■□□□□ 0.07
Rnf40-202ENSMUST00000205694 Syce3B5KM66 88 aa15.46■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Jakmip2D3YXK0 820 aa15.46■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Strn4P58404 760 aa15.46■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Nol11Q8BJW5 723 aaKnown RBP15.46■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Gps2Q921N8 327 aa15.46■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Otud6bQ8K2H2 294 aa15.45■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Ttc5Q99LG4 440 aa15.45■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Smarca5Q91ZW3 1051 aaKnown RBP15.45■□□□□ 0.06
Rnf40-202ENSMUST00000205694 ZwintQ9CQU5 252 aa15.45■□□□□ 0.06
Rnf40-202ENSMUST00000205694 MicalclQ9D5U9 680 aa15.45■□□□□ 0.06
Rnf40-202ENSMUST00000205694 SfswapQ3USH5 945 aaKnown RBP15.45■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Ddx19aQ61655 478 aaKnown RBP15.45■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Trim30cD3YVI9 513 aa15.44■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Tmem67Q8BR76 992 aa15.44■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Pde4dQ01063 747 aa15.44■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Cpa2Q504N0 417 aa15.44■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Brms1Q99N20 246 aa15.44■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Rai14Q9EP71 979 aaKnown RBP15.44■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Gigyf1Q99MR1 1044 aaKnown RBP15.44■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Ccdc181Q80ZU5 509 aa15.43■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Rnf41Q8BH75 317 aa15.43■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Klc3Q91W40 508 aa15.43■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Kcnn1Q9EQR3 537 aa15.43■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Cetn2Q9R1K9 172 aa15.43■□□□□ 0.06
Rnf40-202ENSMUST00000205694 Tspyl3Q3UYP3 334 aa15.43■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms