RNA–Protein interactions for RNA: ENSMUST00000176893.7

Bdnf-211, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,707 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-211ENSMUST00000176893 Ddx11Q6AXC6 880 aa9.05□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Ppp4r3aQ6P2K6 820 aa9.05□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Armcx6Q8K3A6 301 aa9.05□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Kbtbd12Q9D618 625 aa9.05□□□□□ -0.96
Bdnf-211ENSMUST00000176893 MvpQ9EQK5 861 aa9.05□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Morc2aQ69ZX6 1030 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Slc20a2Q80UP8 656 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Atg7Q9D906 698 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Zkscan5Q9Z1D8 819 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Zfp597E9Q6S0 419 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Klhl23Q6GQU2 558 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Tbc1d31Q6NXY1 996 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Pif1Q80SX8 650 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Frmd4aQ8BIE6 1020 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Aldh1l2Q8K009 923 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Rai14Q9EP71 979 aaKnown RBP9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Arl10Q9QXJ4 243 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Shroom2A2ALU4 1481 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Zfp644E9QA22 1323 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Ranbp1P34022 203 aaKnown RBP9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Drc7Q6V3W6 876 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Slc4a7Q8BTY2 1034 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Cgref1Q8R1U2 281 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Rock1P70335 1354 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 RalgapbQ8BQZ4 1484 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Map3k4O08648 1597 aa9.04□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Gm9992B2RWK3 458 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Kif4P33174 1231 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 XpcP51612 930 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Unc93aQ710D3 458 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 RbsnQ80Y56 783 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Olfml1Q8BSH2 233 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 CerkQ8K4Q7 531 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Krt20Q9D312 431 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 PtprtQ99M80 1454 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Psmc1P62192 440 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 ChpfQ6IQX7 774 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Cc2d1bQ8BRN9 848 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Bloc1s4Q8VED2 215 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 CenpqQ9CPQ5 267 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Kdm5cP41230 1554 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Cspp1B2RX88 1205 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Ifrd1P19182 449 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Pank1Q8K4K6 548 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Synpo2Q91YE8 1087 aaKnown RBP9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Q922C1 641 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Cep83Q9D5R3 692 aa9.03□□□□□ -0.96
Bdnf-211ENSMUST00000176893 Tpm3P21107 285 aaKnown RBP9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Hvcn1Q3U2S8 269 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Anp32cQ64G17 123 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Dusp9Q7TNL7 452 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Tmcc2Q80W04 706 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Rrp15Q9CYX7 281 aaKnown RBP9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Nup160Q9Z0W3 1402 aaKnown RBP9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Rec8Q8C5S7 591 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Card11Q8CIS0 1159 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 CrebzfQ91ZR3 358 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 4931400O07RikQ9D4M5 137 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 SufuQ9Z0P7 484 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Tdrd9Q14BI7 1383 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Casq1O09165 405 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Bag4Q8CI61 457 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Borcs6Q9D6W8 360 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Nop56Q9D6Z1 580 aaKnown RBP9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Spaca1Q9DA48 305 aa9.02□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Phlpp2Q8BXA7 1320 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Tarbp1E9Q368 1579 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Srpk2O54781 681 aaKnown RBP9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Hdgfl1Q2VPR5 283 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Gemin4Q6P6L6 1058 aaKnown RBP9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Mis12Q9CY25 206 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Zcchc8Q9CYA6 709 aaKnown RBP9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 PigoQ9JJI6 1093 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Rfx7F8VPJ6 1459 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Lmtk2Q3TYD6 1471 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Pla2r1Q62028 1487 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 G3bp2P97379 482 aaKnown RBP9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Lrrc43Q3V0L5 667 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 BegainQ68EF6 600 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Shtn1Q8K2Q9 631 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Golga5Q9QYE6 729 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Syce3B5KM66 88 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Lire1P11260 357 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Ccdc102aQ3TMW1 549 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Ift57Q8BXG3 429 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Stk24Q99KH8 431 aa9.01□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Ube4aE9Q735 1028 aa9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Ovgp1Q62010 721 aa9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Rnf187Q8BFX1 236 aa9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 CactinQ9CS00 772 aaKnown RBP9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Saal1Q9D2C2 474 aa9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Ccdc83Q9D4V3 305 aa9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Cep170Q6A065 1588 aa9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Nxf2Q4ZGD8 691 aa9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Mns1Q61884 491 aa9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Sugt1Q9CX34 336 aa9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Dhx8A2A4P0 1244 aaKnown RBP9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Camk4P08414 469 aa9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Prpf38aQ4FK66 312 aaKnown RBP9□□□□□ -0.97
Bdnf-211ENSMUST00000176893 Cep131Q62036 1060 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms