RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Rad50P70388 1312 aa14.08□□□□□ -0.16
Trim11-202ENSMUST00000108809 Tnnt1O88346 262 aa14.08□□□□□ -0.16
Trim11-202ENSMUST00000108809 Amotl2Q8K371 772 aa14.08□□□□□ -0.16
Trim11-202ENSMUST00000108809 Col1a2Q01149 1372 aa14.08□□□□□ -0.16
Trim11-202ENSMUST00000108809 Tmem2Q5FWI3 1383 aa14.08□□□□□ -0.16
Trim11-202ENSMUST00000108809 Ncoa4Q5U4H9 625 aa14.07□□□□□ -0.16
Trim11-202ENSMUST00000108809 Ddrgk1Q80WW9 315 aa14.07□□□□□ -0.16
Trim11-202ENSMUST00000108809 Elmsan1E9Q2I4 1089 aaKnown RBP14.07□□□□□ -0.16
Trim11-202ENSMUST00000108809 Cct4P80315 539 aaKnown RBP14.07□□□□□ -0.16
Trim11-202ENSMUST00000108809 Strn4P58404 760 aa14.07□□□□□ -0.16
Trim11-202ENSMUST00000108809 Ddx19aQ61655 478 aaKnown RBP14.07□□□□□ -0.16
Trim11-202ENSMUST00000108809 Echdc1Q9D9V3 322 aa14.07□□□□□ -0.16
Trim11-202ENSMUST00000108809 PogkQ80TC5 607 aa14.06□□□□□ -0.16
Trim11-202ENSMUST00000108809 Jakmip1Q8BVL9 626 aa14.06□□□□□ -0.16
Trim11-202ENSMUST00000108809 Aox2Q5SGK3 1345 aa14.06□□□□□ -0.16
Trim11-202ENSMUST00000108809 Smarce1O54941 411 aaKnown RBP14.06□□□□□ -0.16
Trim11-202ENSMUST00000108809 St18Q80TY4 1045 aa14.06□□□□□ -0.16
Trim11-202ENSMUST00000108809 KinQ8K339 391 aa14.06□□□□□ -0.16
Trim11-202ENSMUST00000108809 Mlh1Q9JK91 760 aa14.06□□□□□ -0.16
Trim11-202ENSMUST00000108809 Unc13bQ9Z1N9 1602 aa14.06□□□□□ -0.16
Trim11-202ENSMUST00000108809 Zap70P43404 618 aa14.06□□□□□ -0.16
Trim11-202ENSMUST00000108809 E4f1Q8CCE9 783 aa14.06□□□□□ -0.16
Trim11-202ENSMUST00000108809 Syce3B5KM66 88 aa14.05□□□□□ -0.16
Trim11-202ENSMUST00000108809 PtmaP26350 111 aa14.05□□□□□ -0.16
Trim11-202ENSMUST00000108809 Glipr1l2Q9CQ35 332 aa14.05□□□□□ -0.16
Trim11-202ENSMUST00000108809 Slx4ipQ9D7Y9 413 aa14.05□□□□□ -0.16
Trim11-202ENSMUST00000108809 Chmp4cQ9D7F7 232 aa14.04□□□□□ -0.16
Trim11-202ENSMUST00000108809 Kdm4aQ8BW72 1064 aa14.04□□□□□ -0.16
Trim11-202ENSMUST00000108809 Add2Q9QYB8 725 aa14.04□□□□□ -0.16
Trim11-202ENSMUST00000108809 Flt4P35917 1363 aa14.04□□□□□ -0.16
Trim11-202ENSMUST00000108809 Ppp1r37Q8BKR5 712 aa14.03□□□□□ -0.16
Trim11-202ENSMUST00000108809 Topaz1E5FYH1 1653 aa14.03□□□□□ -0.16
Trim11-202ENSMUST00000108809 Cpa2Q504N0 417 aa14.03□□□□□ -0.16
Trim11-202ENSMUST00000108809 Clcn1Q64347 994 aa14.03□□□□□ -0.16
Trim11-202ENSMUST00000108809 Ints3Q7TPD0 1041 aaKnown RBP14.03□□□□□ -0.16
Trim11-202ENSMUST00000108809 Kif4P33174 1231 aa14.03□□□□□ -0.16
Trim11-202ENSMUST00000108809 Tbc1d30Q69ZT9 766 aa14.03□□□□□ -0.16
Trim11-202ENSMUST00000108809 Fez1Q8K0X8 392 aa14.03□□□□□ -0.16
Trim11-202ENSMUST00000108809 Exoc6bA6H5Z3 810 aa14.02□□□□□ -0.16
Trim11-202ENSMUST00000108809 Pdcl2Q78Y63 240 aa14.02□□□□□ -0.16
Trim11-202ENSMUST00000108809 Abcc4E9Q236 1325 aa14.02□□□□□ -0.16
Trim11-202ENSMUST00000108809 Fam228bQ497Q6 232 aa14.02□□□□□ -0.17
Trim11-202ENSMUST00000108809 Tgfb1i1Q62219 461 aa14.02□□□□□ -0.17
Trim11-202ENSMUST00000108809 Gripap1Q8VD04 806 aa14.02□□□□□ -0.17
Trim11-202ENSMUST00000108809 Tns3Q5SSZ5 1440 aa14.01□□□□□ -0.17
Trim11-202ENSMUST00000108809 Kiaa0232Q80U59 1396 aaKnown RBP14.01□□□□□ -0.17
Trim11-202ENSMUST00000108809 MyclP10166 368 aa14.01□□□□□ -0.17
Trim11-202ENSMUST00000108809 TatQ8QZR1 454 aa14.01□□□□□ -0.17
Trim11-202ENSMUST00000108809 Tmem119Q8R138 280 aa14.01□□□□□ -0.17
Trim11-202ENSMUST00000108809 Ccar2Q8VDP4 922 aaKnown RBP14.01□□□□□ -0.17
Trim11-202ENSMUST00000108809 Rufy3Q9D394 469 aa14.01□□□□□ -0.17
Trim11-202ENSMUST00000108809 Zfp804bA0A0G2JGH6 1343 aa14.01□□□□□ -0.17
Trim11-202ENSMUST00000108809 Zscan25B2RX31 543 aa14.01□□□□□ -0.17
Trim11-202ENSMUST00000108809 Slc4a10Q5DTL9 1118 aa14.01□□□□□ -0.17
Trim11-202ENSMUST00000108809 Btbd11Q6GQW0 1109 aa14.01□□□□□ -0.17
Trim11-202ENSMUST00000108809 Gimap6Q8K349 305 aa14.01□□□□□ -0.17
Trim11-202ENSMUST00000108809 Taf5lQ91WQ5 589 aa14□□□□□ -0.17
Trim11-202ENSMUST00000108809 Tjp1P39447 1745 aaKnown RBP14□□□□□ -0.17
Trim11-202ENSMUST00000108809 Rbm27Q5SFM8 1060 aaKnown RBP14□□□□□ -0.17
Trim11-202ENSMUST00000108809 GphnQ8BUV3 769 aaKnown RBP14□□□□□ -0.17
Trim11-202ENSMUST00000108809 Brf1Q8CFK2 676 aa14□□□□□ -0.17
Trim11-202ENSMUST00000108809 Erich6bQ9D4S6 220 aa14□□□□□ -0.17
Trim11-202ENSMUST00000108809 Stk3Q9JI10 497 aa14□□□□□ -0.17
Trim11-202ENSMUST00000108809 Rcan3Q9JKK0 239 aa14□□□□□ -0.17
Trim11-202ENSMUST00000108809 Ddx60E9PZQ1 1711 aa14□□□□□ -0.17
Trim11-202ENSMUST00000108809 Fkbp4P30416 458 aa13.99□□□□□ -0.17
Trim11-202ENSMUST00000108809 Gjb2Q00977 226 aa13.99□□□□□ -0.17
Trim11-202ENSMUST00000108809 Kcnh5Q920E3 988 aa13.99□□□□□ -0.17
Trim11-202ENSMUST00000108809 EspnlQ3UYR4 1005 aa13.99□□□□□ -0.17
Trim11-202ENSMUST00000108809 Mphosph10Q810V0 681 aaKnown RBP13.99□□□□□ -0.17
Trim11-202ENSMUST00000108809 Dnajc10Q9DC23 793 aa13.99□□□□□ -0.17
Trim11-202ENSMUST00000108809 Kcnb2A6H8H5 907 aa13.99□□□□□ -0.17
Trim11-202ENSMUST00000108809 Cfdp1O88271 295 aaKnown RBP13.99□□□□□ -0.17
Trim11-202ENSMUST00000108809 TimelessQ9R1X4 1197 aa13.99□□□□□ -0.17
Trim11-202ENSMUST00000108809 Ppfia1B2RXQ2 1266 aa13.98□□□□□ -0.17
Trim11-202ENSMUST00000108809 Wdr93Q402B2 695 aa13.98□□□□□ -0.17
Trim11-202ENSMUST00000108809 Map3k2Q61083 619 aa13.98□□□□□ -0.17
Trim11-202ENSMUST00000108809 Tceal9Q9DD24 104 aa13.98□□□□□ -0.17
Trim11-202ENSMUST00000108809 Irx6Q9ER75 438 aa13.98□□□□□ -0.17
Trim11-202ENSMUST00000108809 Map3k13Q1HKZ5 959 aa13.98□□□□□ -0.17
Trim11-202ENSMUST00000108809 HellsQ60848 821 aa13.98□□□□□ -0.17
Trim11-202ENSMUST00000108809 DpydQ8CHR6 1025 aa13.97□□□□□ -0.17
Trim11-202ENSMUST00000108809 Pnma3Q8JZW8 466 aa13.97□□□□□ -0.17
Trim11-202ENSMUST00000108809 Wdr17E9Q271 1322 aa13.97□□□□□ -0.17
Trim11-202ENSMUST00000108809 Nphp3Q7TNH6 1325 aa13.97□□□□□ -0.17
Trim11-202ENSMUST00000108809 GckrQ91X44 587 aa13.97□□□□□ -0.17
Trim11-202ENSMUST00000108809 Erbb4Q61527 1308 aa13.97□□□□□ -0.17
Trim11-202ENSMUST00000108809 Col22a1E9Q7P1 1613 aa13.97□□□□□ -0.17
Trim11-202ENSMUST00000108809 Tti2Q8BGV4 512 aa13.97□□□□□ -0.17
Trim11-202ENSMUST00000108809 Top1mtQ8R4U6 593 aa13.97□□□□□ -0.17
Trim11-202ENSMUST00000108809 Eif3aP23116 1344 aaKnown RBP13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 Simc1E9Q6E9 1354 aa13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 TnrQ8BYI9 1358 aa13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 Syt1P46096 421 aa13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 Pa2g4P50580 394 aaKnown RBP13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 Tpm2P58774 284 aa13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 PsapQ61207 557 aaKnown RBP13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 Pof1bQ8K4L4 587 aa13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 SnrkQ8VDU5 748 aa13.96□□□□□ -0.17
Trim11-202ENSMUST00000108809 Tnks1bp1P58871 1720 aa13.96□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 140 ms