RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 TkfcQ8VC30 578 aa13.25□□□□□ -0.29
Trim61-201ENSMUST00000078409 Rmi1Q9D4G9 616 aa13.25□□□□□ -0.29
Trim61-201ENSMUST00000078409 TrdnE9Q9K5 693 aa13.24□□□□□ -0.29
Trim61-201ENSMUST00000078409 Hoxd11P23813 323 aa13.24□□□□□ -0.29
Trim61-201ENSMUST00000078409 Cnga1P29974 684 aa13.24□□□□□ -0.29
Trim61-201ENSMUST00000078409 Traf1P39428 409 aa13.24□□□□□ -0.29
Trim61-201ENSMUST00000078409 Cavin2Q63918 418 aaKnown RBP13.24□□□□□ -0.29
Trim61-201ENSMUST00000078409 Ak7Q9D2H2 614 aa13.24□□□□□ -0.29
Trim61-201ENSMUST00000078409 Rock2P70336 1388 aa13.24□□□□□ -0.29
Trim61-201ENSMUST00000078409 Gpr162Q3UN16 588 aa13.23□□□□□ -0.29
Trim61-201ENSMUST00000078409 Ppm1fQ8CGA0 452 aa13.23□□□□□ -0.29
Trim61-201ENSMUST00000078409 Usp21Q9QZL6 566 aa13.23□□□□□ -0.29
Trim61-201ENSMUST00000078409 Col15a1O35206 1367 aa13.23□□□□□ -0.29
Trim61-201ENSMUST00000078409 Adgre1Q61549 931 aa13.22□□□□□ -0.29
Trim61-201ENSMUST00000078409 Tmx4Q8C0L0 335 aa13.22□□□□□ -0.29
Trim61-201ENSMUST00000078409 Igsf1Q7TQA1 1317 aa13.22□□□□□ -0.29
Trim61-201ENSMUST00000078409 Spout1Q3UHX9 385 aaKnown RBP13.21□□□□□ -0.29
Trim61-201ENSMUST00000078409 Fam177a1Q8BR63 207 aa13.21□□□□□ -0.29
Trim61-201ENSMUST00000078409 Tcerg1Q8CGF7 1100 aaKnown RBP13.21□□□□□ -0.29
Trim61-201ENSMUST00000078409 MeiocA2AG06 965 aa13.21□□□□□ -0.29
Trim61-201ENSMUST00000078409 Gm17615E9Q9P2 165 aa13.21□□□□□ -0.29
Trim61-201ENSMUST00000078409 Fez2Q6TYB5 348 aa13.21□□□□□ -0.29
Trim61-201ENSMUST00000078409 Apbb1ipQ8R5A3 670 aa13.21□□□□□ -0.29
Trim61-201ENSMUST00000078409 Casz1Q9CWL2 1761 aa13.21□□□□□ -0.3
Trim61-201ENSMUST00000078409 Mctp2Q5RJH2 878 aa13.2□□□□□ -0.3
Trim61-201ENSMUST00000078409 Sf3a1Q8K4Z5 791 aaKnown RBP13.2□□□□□ -0.3
Trim61-201ENSMUST00000078409 Mybpc2Q5XKE0 1136 aa13.2□□□□□ -0.3
Trim61-201ENSMUST00000078409 Hoxc9P09633 260 aa13.19□□□□□ -0.3
Trim61-201ENSMUST00000078409 Jdp2P97875 163 aa13.19□□□□□ -0.3
Trim61-201ENSMUST00000078409 Kdm4aQ8BW72 1064 aa13.19□□□□□ -0.3
Trim61-201ENSMUST00000078409 Znrd1-asQ8R0E5 213 aa13.19□□□□□ -0.3
Trim61-201ENSMUST00000078409 Cep83Q9D5R3 692 aa13.19□□□□□ -0.3
Trim61-201ENSMUST00000078409 Brpf1B2RRD7 1212 aa13.18□□□□□ -0.3
Trim61-201ENSMUST00000078409 PappaQ8R4K8 1624 aa13.18□□□□□ -0.3
Trim61-201ENSMUST00000078409 Gm21680A0A0G2JGR8 267 aa13.18□□□□□ -0.3
Trim61-201ENSMUST00000078409 Klra5Q60652 266 aa13.18□□□□□ -0.3
Trim61-201ENSMUST00000078409 Chaf1aQ9QWF0 911 aa13.18□□□□□ -0.3
Trim61-201ENSMUST00000078409 Gm10471E9Q1C7 252 aa13.17□□□□□ -0.3
Trim61-201ENSMUST00000078409 NppbP40753 121 aa13.16□□□□□ -0.3
Trim61-201ENSMUST00000078409 Col23a1Q8K4G2 532 aa13.16□□□□□ -0.3
Trim61-201ENSMUST00000078409 Socs7Q8VHQ2 579 aa13.16□□□□□ -0.3
Trim61-201ENSMUST00000078409 Klc3Q91W40 508 aa13.16□□□□□ -0.3
Trim61-201ENSMUST00000078409 Kcnj4P52189 445 aa13.16□□□□□ -0.3
Trim61-201ENSMUST00000078409 Rundc1Q0VDN7 615 aa13.16□□□□□ -0.3
Trim61-201ENSMUST00000078409 Pwp2Q8BU03 919 aaKnown RBP13.16□□□□□ -0.3
Trim61-201ENSMUST00000078409 Fam50bQ9WTJ8 334 aa13.16□□□□□ -0.3
Trim61-201ENSMUST00000078409 Rbm25B2RY56 838 aaKnown RBP13.15□□□□□ -0.3
Trim61-201ENSMUST00000078409 Trap1aP19473 224 aa13.15□□□□□ -0.3
Trim61-201ENSMUST00000078409 Pdcl2Q78Y63 240 aa13.15□□□□□ -0.3
Trim61-201ENSMUST00000078409 Anapc4Q91W96 807 aa13.15□□□□□ -0.3
Trim61-201ENSMUST00000078409 Rnaseh2aQ9CWY8 301 aa13.15□□□□□ -0.3
Trim61-201ENSMUST00000078409 Sned1Q70E20 1403 aa13.15□□□□□ -0.3
Trim61-201ENSMUST00000078409 Gm10093D3YYI8 482 aa13.14□□□□□ -0.31
Trim61-201ENSMUST00000078409 Hdac1O09106 482 aaKnown RBP13.14□□□□□ -0.31
Trim61-201ENSMUST00000078409 Esx1O88933 382 aa13.14□□□□□ -0.31
Trim61-201ENSMUST00000078409 Prom2Q3UUY6 835 aa13.14□□□□□ -0.31
Trim61-201ENSMUST00000078409 Fam71bQ5STT6 665 aa13.14□□□□□ -0.31
Trim61-201ENSMUST00000078409 Adam1bQ8R534 806 aa13.14□□□□□ -0.31
Trim61-201ENSMUST00000078409 Kiaa1107Q80TK0 1369 aa13.14□□□□□ -0.31
Trim61-201ENSMUST00000078409 Slc20a2Q80UP8 656 aa13.14□□□□□ -0.31
Trim61-201ENSMUST00000078409 Tspan18Q80WR1 248 aa13.14□□□□□ -0.31
Trim61-201ENSMUST00000078409 Simc1E9Q6E9 1354 aa13.13□□□□□ -0.31
Trim61-201ENSMUST00000078409 Speer4bQ9D9F7 267 aa13.13□□□□□ -0.31
Trim61-201ENSMUST00000078409 Pes1Q9EQ61 584 aaKnown RBP13.13□□□□□ -0.31
Trim61-201ENSMUST00000078409 Plch1Q4KWH5 1682 aa13.13□□□□□ -0.31
Trim61-201ENSMUST00000078409 Msl1Q6PDM1 616 aa13.12□□□□□ -0.31
Trim61-201ENSMUST00000078409 Spon1Q8VCC9 807 aa13.12□□□□□ -0.31
Trim61-201ENSMUST00000078409 Zbtb12Q9Z150 459 aa13.12□□□□□ -0.31
Trim61-201ENSMUST00000078409 Rad17Q6NXW6 688 aa13.12□□□□□ -0.31
Trim61-201ENSMUST00000078409 Htatsf1Q8BGC0 757 aa13.12□□□□□ -0.31
Trim61-201ENSMUST00000078409 CoblQ5NBX1 1337 aaKnown RBP13.11□□□□□ -0.31
Trim61-201ENSMUST00000078409 CanxP35564 591 aaKnown RBP13.11□□□□□ -0.31
Trim61-201ENSMUST00000078409 Ercc3P49135 783 aa13.11□□□□□ -0.31
Trim61-201ENSMUST00000078409 Spata31d1bE9QA57 1361 aa13.11□□□□□ -0.31
Trim61-201ENSMUST00000078409 Nub1P54729 614 aa13.11□□□□□ -0.31
Trim61-201ENSMUST00000078409 4930572O03RikQ8C5Y0 211 aa13.11□□□□□ -0.31
Trim61-201ENSMUST00000078409 GscQ02591 256 aa13.1□□□□□ -0.31
Trim61-201ENSMUST00000078409 ApobrQ8VBT6 942 aa13.1□□□□□ -0.31
Trim61-201ENSMUST00000078409 SnrkQ8VDU5 748 aa13.1□□□□□ -0.31
Trim61-201ENSMUST00000078409 Trpm3Q5F4S9 1721 aa13.1□□□□□ -0.31
Trim61-201ENSMUST00000078409 Klhl33G3UW92 533 aa13.09□□□□□ -0.31
Trim61-201ENSMUST00000078409 Ccne1Q61457 408 aa13.09□□□□□ -0.31
Trim61-201ENSMUST00000078409 Morc2aQ69ZX6 1030 aa13.09□□□□□ -0.31
Trim61-201ENSMUST00000078409 Camkk2Q8C078 588 aa13.09□□□□□ -0.31
Trim61-201ENSMUST00000078409 AmotQ8VHG2 1126 aa13.09□□□□□ -0.31
Trim61-201ENSMUST00000078409 Ubr3Q5U430 1889 aa13.09□□□□□ -0.31
Trim61-201ENSMUST00000078409 Itgb4A2A863 1818 aa13.09□□□□□ -0.31
Trim61-201ENSMUST00000078409 Rnf216P58283 853 aa13.09□□□□□ -0.31
Trim61-201ENSMUST00000078409 Ctr9Q62018 1173 aaKnown RBP13.09□□□□□ -0.31
Trim61-201ENSMUST00000078409 Kdm6aO70546 1401 aa13.08□□□□□ -0.32
Trim61-201ENSMUST00000078409 Tmf1B9EKI3 1091 aa13.08□□□□□ -0.32
Trim61-201ENSMUST00000078409 Hoxb7P09024 217 aa13.07□□□□□ -0.32
Trim61-201ENSMUST00000078409 Tgfb2P27090 414 aa13.07□□□□□ -0.32
Trim61-201ENSMUST00000078409 Slc7a3P70423 618 aa13.07□□□□□ -0.32
Trim61-201ENSMUST00000078409 Znf704Q9ERQ3 566 aa13.07□□□□□ -0.32
Trim61-201ENSMUST00000078409 Irx5Q9JKQ4 484 aa13.07□□□□□ -0.32
Trim61-201ENSMUST00000078409 Bicdl1A0JNT9 577 aa13.06□□□□□ -0.32
Trim61-201ENSMUST00000078409 Birc3O08863 600 aa13.06□□□□□ -0.32
Trim61-201ENSMUST00000078409 Col11a2Q64739 1736 aa13.06□□□□□ -0.32
Trim61-201ENSMUST00000078409 Ankrd13aQ80UP5 588 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms