RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Kdm6aO70546 1401 aa8.73□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Slit2Q9R1B9 1521 aa8.73□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Unc13bQ9Z1N9 1602 aa8.73□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Anapc15-psA0A140T8L6 141 aa8.73□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Zscan25B2RX31 543 aa8.73□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Syce3B5KM66 88 aa8.73□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Hspa2P17156 633 aa8.73□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Zfp91Q62511 572 aa8.73□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Rab11fip3Q8CHD8 1047 aa8.73□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Cyp27a1Q9DBG1 533 aa8.73□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Tet3Q8BG87 1668 aa8.73□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Aox2Q5SGK3 1345 aa8.73□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Pdia3P27773 505 aaKnown RBP8.72□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Nucb1Q02819 459 aaKnown RBP8.72□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Ddx54Q8K4L0 874 aaKnown RBP8.72□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Msh6P54276 1358 aaKnown RBP8.72□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Gadd45bP22339 160 aa8.72□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Card10P58660 1021 aa8.72□□□□□ -1.01
Clrn1-202ENSMUST00000055636 CalcaP70160 136 aa8.72□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Fam13aQ8BGI4 693 aa8.72□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Bcl11bQ99PV8 884 aa8.72□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Speer4bQ9D9F7 267 aa8.72□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Atf5O70191 283 aa8.72□□□□□ -1.01
Clrn1-202ENSMUST00000055636 PigbQ9JJQ0 542 aa8.72□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Zap70P43404 618 aa8.71□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Rnf214Q8BFU3 668 aaKnown RBP8.71□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Aldh8a1Q8BH00 487 aa8.71□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Chmp7Q8R1T1 451 aa8.71□□□□□ -1.01
Clrn1-202ENSMUST00000055636 Adgrb1Q3UHD1 1582 aa8.71□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Disp3A3KFU9 1347 aa8.71□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Robo1O89026 1612 aa8.71□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Becn1O88597 448 aa8.71□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Igfbp6P47880 238 aa8.71□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Eif4g2Q62448 906 aaKnown RBP8.71□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Rad17Q6NXW6 688 aa8.71□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Slc39a6Q8C145 765 aa8.71□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Rcan3Q9JKK0 239 aa8.71□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Jarid2Q62315 1234 aa8.7□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Cgnl1Q6AW69 1298 aa8.7□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Srgap3Q812A2 1099 aa8.7□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gys2Q8VCB3 704 aa8.7□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Nid2O88322 1403 aa8.7□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Nup153E9Q3G8 1462 aaKnown RBP8.7□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gm21680A0A0G2JGR8 267 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Cwc27Q3TKY6 469 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Mphosph10Q810V0 681 aaKnown RBP8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 GckrQ91X44 587 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Phkg2Q9DB30 406 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Trpm3Q5F4S9 1721 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gm21663A0A0G2JE01 267 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gm7361D3Z6R1 267 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 5031410I06RikE9Q4E0 267 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gm1979E9QAN3 267 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gm5862K7N5V5 267 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gm10220K7N660 267 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Cfdp1O88271 295 aaKnown RBP8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Tlr7P58681 1050 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Cnnm1Q0GA42 951 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Mindy4Q3UQI9 744 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Zpr1Q62384 459 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Prkab2Q6PAM0 271 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Asic4Q7TNS7 539 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Chmp4cQ9D7F7 232 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Igsf1Q7TQA1 1317 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Elp1Q7TT37 1333 aaKnown RBP8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Ppp1r42Q8R1Z4 357 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Dhx30Q99PU8 1217 aaKnown RBP8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gcc1Q9D4H2 778 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Siglec1Q62230 1695 aa8.69□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Zkscan16A2ALW2 728 aa8.68□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Ttll7A4Q9F0 912 aa8.68□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Chmp4bQ9D8B3 224 aaKnown RBP8.68□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gnai2P08752 355 aaKnown RBP8.68□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Chd1lQ9CXF7 900 aa8.68□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Pnpla7A2AJ88 1352 aa8.68□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Col1a2Q01149 1372 aa8.68□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Tm6sf1P58749 370 aa8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Slc4a10Q5DTL9 1118 aa8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 CoilQ5SU73 570 aa8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Map3k2Q61083 619 aa8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Kdm4aQ8BW72 1064 aa8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Simc1E9Q6E9 1354 aa8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Atg4a-psA0A0G2JFS9 396 aa8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 SympkQ80X82 1284 aa8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Atg4aQ8C9S8 396 aa8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Q9D2X8 372 aa8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Lekr1B2RVN1 116 aa8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 HnrnpuQ8VEK3 800 aaKnown RBP8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Bcar3Q9QZK2 820 aa8.67□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Prune1Q8BIW1 454 aa8.66□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gimap5Q8BWF2 308 aa8.66□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Slc5a1Q8C3K6 665 aa8.66□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Aldh1l2Q8K009 923 aa8.66□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Gripap1Q8VD04 806 aa8.66□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Pdia6Q922R8 440 aaKnown RBP8.66□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Wnk3Q80XP9 1757 aa8.66□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Cdhr2E9Q7P9 1308 aa8.66□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Vwa3bJ9JI28 736 aa8.66□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Cpa2Q504N0 417 aa8.66□□□□□ -1.02
Clrn1-202ENSMUST00000055636 Mcm2P97310 904 aa8.65□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms