RNA–Protein interactions for RNA: ENSMUST00000047511.13

Shtn1-201, Transcript of Shootin-1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shtn1, Length 4,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-201ENSMUST00000047511 Cdc42bpbQ7TT50 1713 aa14.12□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Ttc21aQ8C0S4 1314 aa14.12□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Kif1bQ60575 1816 aaKnown RBP14.12□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Tex14Q7M6U3 1450 aa14.12□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Tnni2P13412 182 aa14.12□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Zfp91Q62511 572 aa14.12□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Rhot2Q8JZN7 620 aa14.12□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Ddx58Q6Q899 926 aa14.11□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Zbtb22Q9Z0G7 638 aa14.11□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Tulp4Q9JIL5 1547 aa14.11□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Catsper2A2ARP9 588 aa14.11□□□□□ -0.15
Shtn1-201ENSMUST00000047511 CrklP47941 303 aa14.11□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Hand2Q61039 217 aa14.11□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Hook1Q8BIL5 728 aa14.11□□□□□ -0.15
Shtn1-201ENSMUST00000047511 LratQ9JI60 231 aa14.11□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Zfyve16Q80U44 1528 aa14.11□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Grm8P47743 908 aa14.1□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Ptcd1Q8C2E4 695 aaKnown RBP14.1□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Pms1Q8K119 917 aa14.1□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Polr3dQ91WD1 398 aa14.1□□□□□ -0.15
Shtn1-201ENSMUST00000047511 PzpQ61838 1495 aa14.1□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Atp8b2P98199 1209 aa14.1□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Ankle2Q6P1H6 964 aa14.1□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Myo3aQ8K3H5 1613 aa14.1□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Pdia3P27773 505 aaKnown RBP14.1□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Terf2O35144 541 aa14.1□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Clcn1Q64347 994 aa14.1□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Nos1Q9Z0J4 1429 aa14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Map7d2A2AG50 781 aa14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Cspp1B2RX88 1205 aa14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Tbc1d32Q3URV1 1296 aa14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Trim28Q62318 834 aa14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Tmem67Q8BR76 992 aa14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Taf7Q9R1C0 341 aa14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Usp19Q3UJD6 1360 aa14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 RdxP26043 583 aaKnown RBP14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Gnat3Q3V3I2 354 aa14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Gpatch3Q8BIY1 525 aa14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Evc2Q8K1G2 1220 aa14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 NaspQ99MD9 773 aaKnown RBP14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Bicc1Q99MQ1 977 aaKnown RBP14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Srek1Q8BZX4 494 aaKnown RBP14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Edc3Q8K2D3 508 aaKnown RBP14.09□□□□□ -0.15
Shtn1-201ENSMUST00000047511 Kdm2bQ6P1G2 1309 aa14.08□□□□□ -0.15
Shtn1-201ENSMUST00000047511 SfswapQ3USH5 945 aaKnown RBP14.08□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Cyp7a1Q64505 503 aa14.08□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Uhrf1bp1lA2RSJ4 1457 aa14.08□□□□□ -0.16
Shtn1-201ENSMUST00000047511 LifrP42703 1092 aa14.08□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Cct2P80314 535 aaKnown RBP14.08□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Fam170aQ66LM6 333 aa14.08□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Cwc25Q9DBF7 416 aa14.08□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Fndc1E9Q043 1732 aa14.08□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Syce3B5KM66 88 aa14.08□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Mum1Q6DID5 682 aa14.08□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Fsd2Q8BZ52 692 aa14.08□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Ifit1bl2Q3U687 466 aa14.07□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Cavin2Q63918 418 aaKnown RBP14.07□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Samm50Q8BGH2 469 aa14.07□□□□□ -0.16
Shtn1-201ENSMUST00000047511 AidaQ8C4Q6 305 aa14.07□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Col17a1Q07563 1470 aa14.07□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Znf771Q8BJ90 317 aa14.07□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Erc1Q99MI1 1120 aa14.07□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Ak9G3UYQ4 1894 aa14.07□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Prl7d1P04769 244 aa14.07□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Cbx1P83917 185 aaKnown RBP14.07□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Kif21bQ9QXL1 1668 aa14.07□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Adamts13Q769J6 1426 aa14.06□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Stk38Q91VJ4 465 aa14.06□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Ier5O89113 308 aa14.06□□□□□ -0.16
Shtn1-201ENSMUST00000047511 SympkQ80X82 1284 aa14.06□□□□□ -0.16
Shtn1-201ENSMUST00000047511 KdrP35918 1367 aa14.06□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Slx4ipQ9D7Y9 413 aa14.06□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Mcmdc2E9Q956 681 aa14.05□□□□□ -0.16
Shtn1-201ENSMUST00000047511 NmiO35309 314 aa14.05□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Ehmt1Q5DW34 1296 aa14.05□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Adam1aQ60813 791 aa14.05□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Cfap69Q8BH53 942 aa14.05□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Atp10aO54827 1508 aa14.05□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Anapc15-psA0A140T8L6 141 aa14.05□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Mcm4P49717 862 aa14.05□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Gabpb2P81069 414 aa14.05□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Kidins220E9Q9B7 1793 aa14.05□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Pet2A2AHY8 747 aa14.04□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Rasa1E9PYG6 1038 aa14.04□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Wdr17E9Q271 1322 aa14.04□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Mcm3P25206 812 aaKnown RBP14.04□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Olfml1Q8BSH2 233 aa14.04□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Rbbp8nlA2ABX0 614 aa14.04□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Rbm19Q8R3C6 952 aaKnown RBP14.03□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Kri1Q8VDQ9 704 aaKnown RBP14.03□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Cep57l1Q8VDS7 400 aa14.03□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Timm10P62073 90 aa14.03□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Nucb1Q02819 459 aaKnown RBP14.03□□□□□ -0.16
Shtn1-201ENSMUST00000047511 ShprhQ7TPQ3 1674 aa14.03□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Mctp1E9PV86 951 aa14.02□□□□□ -0.16
Shtn1-201ENSMUST00000047511 Miga2Q8BK03 593 aa14.02□□□□□ -0.17
Shtn1-201ENSMUST00000047511 RestQ8VIG1 1082 aa14.02□□□□□ -0.17
Shtn1-201ENSMUST00000047511 Ccdc66Q6NS45 935 aa14.02□□□□□ -0.17
Shtn1-201ENSMUST00000047511 Tmem87bQ8BKU8 555 aa14.02□□□□□ -0.17
Shtn1-201ENSMUST00000047511 Ppfia1B2RXQ2 1266 aa14.01□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms