RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 SlkO54988 1233 aa23.99■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Mum1Q6DID5 682 aa23.99■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Btbd11Q6GQW0 1109 aa23.99■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Filip1lQ6P6L0 1131 aa23.99■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Pmfbp1Q9WVQ0 1022 aa23.99■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 PsapQ61207 557 aaKnown RBP23.99■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Gtf2a1Q99PM3 378 aa23.99■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Zap70P43404 618 aa23.98■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Tlr7P58681 1050 aa23.98■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Flt4P35917 1363 aa23.97■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Strn4P58404 760 aa23.97■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Utp18Q5SSI6 552 aaKnown RBP23.97■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 KinQ8K339 391 aa23.97■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Col18a1P39061 1774 aa23.97■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Rad50P70388 1312 aa23.96■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 EvcP57680 1005 aa23.96■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Ddx19aQ61655 478 aaKnown RBP23.96■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 TnrQ8BYI9 1358 aa23.96■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Nkx2-3P97334 362 aa23.96■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 St18Q80TY4 1045 aa23.96■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Kcnn1Q9EQR3 537 aa23.96■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Simc1E9Q6E9 1354 aa23.95■■□□□ 1.43
Ccdc34-201ENSMUST00000028580 Eif3aP23116 1344 aaKnown RBP23.95■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Phactr2B1AVP0 632 aa23.95■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Glipr1l2Q9CQ35 332 aa23.95■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Exoc6bA6H5Z3 810 aa23.94■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Nol11Q8BJW5 723 aaKnown RBP23.94■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Tceal9Q9DD24 104 aa23.94■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Trim44Q9QXA7 346 aa23.94■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Abcc4E9Q236 1325 aa23.93■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Cfdp1O88271 295 aaKnown RBP23.93■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Jakmip1Q8BVL9 626 aa23.93■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Fkbp4P30416 458 aa23.93■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 HellsQ60848 821 aa23.93■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Pdzrn3Q69ZS0 1063 aa23.93■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Tshz3Q8CGV9 1081 aa23.93■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 4931400O07RikQ9D4M5 137 aa23.93■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Slc4a10Q5DTL9 1118 aa23.92■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Slain2Q8CI08 581 aa23.92■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Scn4aQ9ER60 1841 aa23.92■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Gm9992B2RWK3 458 aa23.91■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Unc93aQ710D3 458 aa23.91■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Ints3Q7TPD0 1041 aaKnown RBP23.91■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Mphosph10Q810V0 681 aaKnown RBP23.91■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 GckrQ91X44 587 aa23.91■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Brwd3A2AHJ4 1799 aa23.9■■□□□ 1.42
Ccdc34-201ENSMUST00000028580 Map3k2Q61083 619 aa23.89■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Irx6Q9ER75 438 aa23.89■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Tgfb1i1Q62219 461 aa23.88■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Pde3bQ61409 1100 aa23.88■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Taf7Q9R1C0 341 aa23.88■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Col15a1O35206 1367 aa23.87■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Kiaa0232Q80U59 1396 aaKnown RBP23.87■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Paxip1Q6NZQ4 1056 aa23.87■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Slx4ipQ9D7Y9 413 aa23.87■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Mlh1Q9JK91 760 aa23.87■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Elmsan1E9Q2I4 1089 aaKnown RBP23.87■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Add2Q9QYB8 725 aa23.87■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Irf9Q61179 399 aa23.86■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 VgfQ0VGU4 617 aa23.85■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Fam228bQ497Q6 232 aa23.85■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Taf5lQ91WQ5 589 aa23.85■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Kcna6Q61923 529 aa23.85■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Brf1Q8CFK2 676 aa23.85■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Ppfia1B2RXQ2 1266 aa23.84■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Map3k13Q1HKZ5 959 aa23.84■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Morc2aQ69ZX6 1030 aa23.84■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 PogkQ80TC5 607 aa23.84■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 SympkQ80X82 1284 aa23.83■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Rapgef3Q8VCC8 918 aa23.83■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Rrp9Q91WM3 475 aaKnown RBP23.83■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Evi5lH3BKQ3 813 aa23.83■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Gadd45bP22339 160 aa23.83■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 PtmaP26350 111 aa23.83■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Ddrgk1Q80WW9 315 aa23.83■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 TkfcQ8VC30 578 aa23.83■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Stk3Q9JI10 497 aa23.83■■□□□ 1.41
Ccdc34-201ENSMUST00000028580 Vsig10D3YX43 558 aa23.82■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Dzip1Q8BMD2 852 aa23.82■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Kif4P33174 1231 aa23.82■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Nphp3Q7TNH6 1325 aa23.82■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Top1mtQ8R4U6 593 aa23.82■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Pdzd9Q9D9M4 266 aa23.82■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 1700006A11RikB9EHI3 544 aa23.81■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Grm8P47743 908 aa23.81■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Gjb2Q00977 226 aa23.81■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Zbtb3Q91X45 518 aa23.81■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Gripap1Q8VD04 806 aa23.8■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Tns2Q8CGB6 1400 aa23.8■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Rrp12Q6P5B0 1295 aaKnown RBP23.8■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Farp2Q91VS8 1065 aa23.8■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Pdia6Q922R8 440 aaKnown RBP23.8■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Bicc1Q99MQ1 977 aaKnown RBP23.8■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Gm10471E9Q1C7 252 aa23.79■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Ppm1mQ8BU27 406 aa23.79■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Syce3B5KM66 88 aa23.79■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Bcl2l13P59017 434 aa23.79■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Rufy3Q9D394 469 aa23.79■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Pa2g4P50580 394 aaKnown RBP23.78■■□□□ 1.4
Ccdc34-201ENSMUST00000028580 Kdm4aQ8BW72 1064 aa23.78■■□□□ 1.4
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms