RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Usp16Q99LG0 825 aa14.57□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Camta1A2A891 1682 aa14.57□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Siglec1Q62230 1695 aa14.57□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Dync1i1O88485 628 aa14.56□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Nucb2P81117 420 aa14.56□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Stk11ipQ3TAA7 1072 aa14.56□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Cdk19Q8BWD8 501 aa14.56□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Adam1bQ8R534 806 aa14.56□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Dnajc14Q921R4 703 aa14.56□□□□□ -0.08
Ufd1-201ENSMUST00000005394 N4bp2F8VQG7 1678 aaKnown RBP14.56□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Mum1Q6DID5 682 aa14.56□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Ccar2Q8VDP4 922 aaKnown RBP14.56□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Kif1aP33173 1695 aa14.56□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Triml2E9PW10 424 aa14.55□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Rangap1P46061 589 aaKnown RBP14.55□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Ccdc162pQ0VG85 912 aa14.55□□□□□ -0.08
Ufd1-201ENSMUST00000005394 KinQ8K339 391 aa14.55□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Q9D2X8 372 aa14.55□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Abcc10Q8R4P9 1501 aa14.55□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Zfp51Q3U4L8 781 aa14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Wdr93Q402B2 695 aa14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Cypt1Q8CH20 168 aa14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Sirt1Q923E4 737 aa14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Acsbg1Q99PU5 721 aa14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Med4Q9CQA5 270 aa14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Zeb2Q9R0G7 1215 aa14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Cavin1O54724 392 aa14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Adcy5P84309 1262 aa14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 CtifQ6PEE2 600 aaKnown RBP14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Fam13bQ8K2H3 851 aa14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Ddx54Q8K4L0 874 aaKnown RBP14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Wdr17E9Q271 1322 aa14.54□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Prkar2bP31324 416 aa14.53□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Utp18Q5SSI6 552 aaKnown RBP14.53□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Marf1Q8BJ34 1730 aaKnown RBP14.53□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Gm973E9Q295 1059 aa14.53□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Kank4Q6P9J5 1016 aa14.53□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Zranb1Q7M760 708 aa14.53□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Emilin2Q8K482 1074 aa14.53□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Hoxb7P09024 217 aa14.52□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Arhgef1Q61210 920 aaKnown RBP14.52□□□□□ -0.09
Ufd1-201ENSMUST00000005394 IbspQ61711 324 aa14.52□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Oxsr1Q6P9R2 527 aa14.52□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Casc1Q6TDU8 730 aa14.52□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Smarca5Q91ZW3 1051 aaKnown RBP14.52□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Ube2hP62257 183 aa14.51□□□□□ -0.09
Ufd1-201ENSMUST00000005394 RestQ8VIG1 1082 aa14.51□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Rbm42Q91V81 474 aaKnown RBP14.51□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Tet3Q8BG87 1668 aa14.51□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Atp2b3Q0VF55 1220 aa14.51□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Cspp1B2RX88 1205 aa14.5□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Slc35g1Q8BY79 368 aa14.5□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Cadps2Q8BYR5 1297 aa14.5□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Rsph6aQ8CDR2 708 aa14.5□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Brpf1B2RRD7 1212 aa14.49□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Ms4a1P19437 291 aa14.49□□□□□ -0.09
Ufd1-201ENSMUST00000005394 EvcP57680 1005 aa14.49□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Plcd3Q8K2J0 785 aa14.49□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Lrrc59Q922Q8 307 aaKnown RBP14.49□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Uhrf1bp1lA2RSJ4 1457 aa14.49□□□□□ -0.09
Ufd1-201ENSMUST00000005394 PtpruB1AUH1 1446 aa14.49□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Atp10bB1AWN4 1474 aa14.49□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Cfap157Q0VFX2 523 aa14.49□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Zscan22Q8BGS5 496 aa14.49□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Tnrc6bQ8BKI2 1810 aaKnown RBP14.49□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Fyb1O35601 819 aa14.48□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Ints3Q7TPD0 1041 aaKnown RBP14.48□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Dixdc1Q80Y83 711 aa14.48□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Bcar3Q9QZK2 820 aa14.48□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Ms4a2P20490 235 aa14.47□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Cbx1P83917 185 aaKnown RBP14.47□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Rab3gap1Q80UJ7 981 aa14.47□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Sass6Q80UK7 654 aa14.47□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Map3k19E9Q3S4 1311 aa14.47□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Elmsan1E9Q2I4 1089 aaKnown RBP14.47□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Tshz2Q68FE9 1030 aa14.47□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Eno4Q8C042 619 aa14.47□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Ttc27Q8CD92 847 aa14.47□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Nfatc2ipO09130 412 aa14.46□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Pdzrn3Q69ZS0 1063 aa14.46□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Ptpdc1Q6NZK8 747 aa14.46□□□□□ -0.09
Ufd1-201ENSMUST00000005394 PdcQ9QW08 244 aa14.46□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Tbc1d8Q9Z1A9 1134 aa14.46□□□□□ -0.09
Ufd1-201ENSMUST00000005394 Ubn2Q80WC1 1314 aa14.46□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Aifm3Q3TY86 605 aa14.45□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Kcnf1Q7TSH7 493 aa14.45□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Ccdc178Q8CDV0 866 aa14.45□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Nop14Q8R3N1 860 aaKnown RBP14.45□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Cabp2Q9JLK4 216 aa14.45□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Nphp1Q9QY53 687 aa14.45□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Cfap73J3QPZ5 306 aa14.45□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Cdkn1cP49919 348 aa14.45□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Mmel1Q9JLI3 765 aa14.45□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Phactr2B1AVP0 632 aa14.44□□□□□ -0.1
Ufd1-201ENSMUST00000005394 1700006A11RikB9EHI3 544 aa14.44□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Cdk4P30285 303 aa14.44□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Mon2Q80TL7 1715 aa14.44□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Mmp8O70138 465 aa14.43□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Ess2O70279 479 aa14.43□□□□□ -0.1
Ufd1-201ENSMUST00000005394 Gnai2P08752 355 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms