RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 SYN3O14994 580 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 BCHEP06276 602 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 HNMTP50135 292 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 SEMA3AQ14563 771 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 PM20D1Q6GTS8 502 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 LETMD1Q6P1Q0 360 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 PRSS48Q7RTY5 328 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 ZSWIM9Q86XI8 627 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 ELMOD2Q8IZ81 293 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 PAK6Q9NQU5 681 aaPredicted RBP17.31■□□□□ 0.36
SMG5-201ENST00000361813 GPR45Q9Y5Y3 372 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 ZNF780BQ9Y6R6 833 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 CNTRLQ7Z7A1 2325 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 CH25HO95992 272 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 HLA-DQA2P01906 255 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 FUCA1P04066 466 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 TLX1P31314 330 aaPredicted RBP17.31■□□□□ 0.36
SMG5-201ENST00000361813 POLR2IP36954 125 aaKnown RBP17.31■□□□□ 0.36
SMG5-201ENST00000361813 SLBPQ14493 270 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMG5-201ENST00000361813 SH2D5Q6ZV89 423 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 OLIG1Q8TAK6 271 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 ARMC5Q96C12 935 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 SEC14L4Q9UDX3 406 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 PCDHGB5Q9Y5G0 923 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 MID1O15344 667 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 PDYNP01213 254 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 ASGR1P07306 291 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 FAM46DQ8NEK8 389 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 ZNF486Q96H40 463 aaPredicted RBP17.31■□□□□ 0.36
SMG5-201ENST00000361813 SMURF1Q9HCE7 757 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 ZCCHC3Q9NUD5 404 aaKnown RBP17.31■□□□□ 0.36
SMG5-201ENST00000361813 OSER1Q9NX31 292 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 PCDHGB6Q9Y5F9 930 aa17.31■□□□□ 0.36
SMG5-201ENST00000361813 MYH9P35579 1960 aaKnown RBP17.3■□□□□ 0.36
SMG5-201ENST00000361813 COL14A1Q05707 1796 aaKnown RBP17.3■□□□□ 0.36
SMG5-201ENST00000361813 CD40LGP29965 261 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 OMPP47874 163 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 CCL23P55773 120 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 UAP1L1Q3KQV9 507 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 MPPE1Q53F39 396 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 SHQ1Q6PI26 577 aaKnown RBP17.3■□□□□ 0.36
SMG5-201ENST00000361813 PEX13Q92968 403 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 TMEM80Q96HE8 168 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 YIPF4Q9BSR8 244 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 WRAP53Q9BUR4 548 aaKnown RBP17.3■□□□□ 0.36
SMG5-201ENST00000361813 TP63Q9H3D4 680 aaPredicted RBP17.3■□□□□ 0.36
SMG5-201ENST00000361813 ZBTB20Q9HC78 741 aaPredicted RBP17.3■□□□□ 0.36
SMG5-201ENST00000361813 AKAP7Q9P0M2 348 aaPredicted RBP17.3■□□□□ 0.36
SMG5-201ENST00000361813 MBD2Q9UBB5 411 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 ISM1B1AKI9 464 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 UPK1BO75841 260 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 PTTG1O95997 202 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 UGT8Q16880 541 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 ZNF613Q6PF04 617 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 CXorf40AQ8TE69 158 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 C12orf4Q9NQ89 552 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 IMP3Q9NV31 184 aaKnown RBP17.3■□□□□ 0.36
SMG5-201ENST00000361813 IRAK3Q9Y616 596 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 MANSC4A6NHS7 340 aaPredicted RBP17.3■□□□□ 0.36
SMG5-201ENST00000361813 FYNP06241 537 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 KLK1P06870 262 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 ZNF648Q5T619 568 aaPredicted RBP17.3■□□□□ 0.36
SMG5-201ENST00000361813 CEACAM20Q6UY09 585 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 FAM220AQ7Z4H9 259 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 FAM217AQ8IXS0 508 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 C1orf74Q96LT6 269 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 MEIS3P2A8K0S8 358 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 OR6A2O95222 327 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 C6orf47O95873 294 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 LAMP2P13473 410 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 ARL4DP49703 201 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 AP1S2P56377 157 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 CCDC28AQ8IWP9 274 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 TRPS1Q9UHF7 1281 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 PCDHB14Q9Y5E9 798 aa17.3■□□□□ 0.36
SMG5-201ENST00000361813 SEPT4O43236 478 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 DNTTP04053 509 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 CDKN1CP49918 316 aaPredicted RBP17.29■□□□□ 0.36
SMG5-201ENST00000361813 HMBOX1Q6NT76 420 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 AMIGO1Q86WK6 493 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 PSD4Q8NDX1 1056 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 PSKH2Q96QS6 385 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 ZNF717Q9BY31 904 aaPredicted RBP17.29■□□□□ 0.36
SMG5-201ENST00000361813 NFKBIEO00221 500 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 POP4O95707 220 aaKnown RBP17.29■□□□□ 0.36
SMG5-201ENST00000361813 GKP32189 559 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 FPGSQ05932 587 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 CBX2Q14781 532 aaPredicted RBP17.29■□□□□ 0.36
SMG5-201ENST00000361813 BPIFB1Q8TDL5 484 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 ZNF431Q8TF32 576 aaPredicted RBP17.29■□□□□ 0.36
SMG5-201ENST00000361813 SUSD6Q92537 303 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 RPL3LQ92901 407 aaKnown RBP17.29■□□□□ 0.36
SMG5-201ENST00000361813 OR51B5Q9H339 312 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 PHF11Q9UIL8 331 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 B3GNT3Q9Y2A9 372 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 IQCMA0A1B0GVH7 501 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 SLC35F4A4IF30 521 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 CHURC1-FNTBB4DL54 471 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 INMT-MINDY4F8WBC2 141 aa17.29■□□□□ 0.36
SMG5-201ENST00000361813 PDPK1O15530 556 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms