RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 MIR1-1HGQ9H1L0 117 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 CREG1O75629 220 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 RSL1D1O76021 490 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 TGFBR2P37173 567 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 USP43Q70EL4 1123 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 CHCHD4Q8N4Q1 142 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 TRPV1Q8NER1 839 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 C12orf66Q96MD2 445 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 TMEM74Q96NL1 305 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 POLR2J2Q9GZM3 115 aaKnown RBP16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 KLHL31Q9H511 634 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 AMBNQ9NP70 447 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 ABCB9Q9NP78 766 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 DHRS7Q9Y394 339 aa16.69■□□□□ 0.26
TRAPPC11-201ENST00000334690 MCIDASD6RGH6 385 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 KHDRBS3O75525 346 aaKnown RBP16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 GDF5P43026 501 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 WNT7BP56706 349 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 GRIK2Q13002 908 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 TARDBPQ13148 414 aaKnown RBP eCLIP16.68■□□□□ 0.261e-6■■□□□ 12.3
TRAPPC11-201ENST00000334690 PRAMEF14Q5SWL7 426 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 PRAMEF13Q5VWM6 474 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 RPS27LQ71UM5 84 aaKnown RBP16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 ZNF563Q8TA94 476 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 OVCA2Q8WZ82 227 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 MRGPRX2Q96LB1 330 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 RDH12Q96NR8 316 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 PHF12Q96QT6 1004 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 IL12RB2Q99665 862 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 C11orf16Q9NQ32 467 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 PRSS51A0A1B0GVH4 220 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 BEST1O76090 585 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 IL7RP16871 459 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 CCR8P51685 355 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 TLE2Q04725 743 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 TIGD6Q17RP2 521 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 FAM171BQ6P995 826 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 RBM18Q96H35 190 aaKnown RBP16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 SLC35A5Q9BS91 424 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 HAPLN2Q9GZV7 340 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 SLC28A3Q9HAS3 691 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 TVP23BQ9NYZ1 205 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 ZNF221Q9UK13 617 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 POFUT2Q9Y2G5 429 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 COQ6Q9Y2Z9 468 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 TGFB1P01137 390 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 VIPR1P32241 457 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 GGT5P36269 586 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 NIPAL4Q0D2K0 466 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 CCDC88AQ3V6T2 1871 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 ARSIQ5FYB1 569 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 NXPE1Q8N323 547 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 NUS1Q96E22 293 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 KCNA7Q96RP8 456 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 CCM2Q9BSQ5 444 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 TRIM39Q9HCM9 518 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 MCUBQ9NWR8 336 aa16.68■□□□□ 0.26
TRAPPC11-201ENST00000334690 FAM92AA1XBS5 289 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 LRRC72A6NJI9 287 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 H3BSA7 217 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 SOCS5O75159 536 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 FMO3P31513 532 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 DSTNP60981 165 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 MYBPC1Q00872 1141 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 ZNF155Q12901 538 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 VITQ6UXI7 678 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 SERINC5Q86VE9 423 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 CMTM8Q8IZV2 173 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 AURKBQ96GD4 344 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 PYURFQ96I23 114 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 RANBP9Q96S59 729 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 OSER1Q9NX31 292 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 ADAMTS5Q9UNA0 930 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 PCDHGA4Q9Y5G9 962 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 HEBP2Q9Y5Z4 205 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 MTX2O75431 263 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 PCDH1Q08174 1060 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 Q6ZVU0 165 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 COL21A1Q96P44 957 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 CD244Q9BZW8 370 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 TPT1P8Q9HAU6 139 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 TRPV5Q9NQA5 729 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 GIN1Q9NXP7 522 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 IKZF2Q9UKS7 526 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 MYH15Q9Y2K3 1946 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 HTRA2O43464 458 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 CSNK2A2P19784 350 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 MPIP34949 423 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 MNDAP41218 407 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 DIO3P55073 304 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 SP140Q13342 867 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 C5orf22Q49AR2 442 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 ZNF783Q6ZMS7 281 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 ZDHHC14Q8IZN3 488 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 SNX33Q8WV41 574 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 EVA1BQ9NVM1 165 aa16.67■□□□□ 0.26
TRAPPC11-201ENST00000334690 TRBV23OR9-2A0A075B6M9 112 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms