RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 SDH1Q00711 640 aa4□□□□□ -1.77
snR42snR42 SOG2Q08817 791 aa4□□□□□ -1.77
snR42snR42 TRS33Q99394 268 aa4□□□□□ -1.77
snR42snR42 COQ4O13525 335 aa3.99□□□□□ -1.77
snR42snR42 POL12P38121 705 aaPredicted RBP3.99□□□□□ -1.77
snR42snR42 BIO5P53744 561 aaKnown RBP3.99□□□□□ -1.77
snR42snR42 ERO1Q03103 563 aa3.99□□□□□ -1.77
snR42snR42 BMS1Q08965 1183 aaKnown RBP3.99□□□□□ -1.77
snR42snR42 UTP10P42945 1769 aaKnown RBP3.99□□□□□ -1.77
snR42snR42 THS1P04801 734 aaKnown RBP3.98□□□□□ -1.77
snR42snR42 SSA4P22202 642 aaKnown RBP3.98□□□□□ -1.77
snR42snR42 SUV3P32580 737 aa3.98□□□□□ -1.77
snR42snR42 FRD1P32614 470 aaKnown RBP3.98□□□□□ -1.77
snR42snR42 MPP10P47083 593 aaKnown RBP3.98□□□□□ -1.77
snR42snR42 GYP7P48365 746 aa3.98□□□□□ -1.77
snR42snR42 SPO71Q03868 1245 aa3.98□□□□□ -1.77
snR42snR42 IOC4Q04213 475 aa3.98□□□□□ -1.77
snR42snR42 HAT1Q12341 374 aa3.98□□□□□ -1.77
snR42snR42 GRX6Q12438 231 aa3.98□□□□□ -1.77
snR42snR42 DFG16Q99234 619 aa3.98□□□□□ -1.77
snR42snR42 PMD1P32634 1753 aa3.97□□□□□ -1.77
snR42snR42 RET1P22276 1149 aaKnown RBP3.97□□□□□ -1.77
snR42snR42 SHC1P39000 512 aa3.97□□□□□ -1.77
snR42snR42 THI22Q06490 572 aa3.97□□□□□ -1.77
snR42snR42 GIC2Q06648 383 aa3.97□□□□□ -1.77
snR42snR42 YDL144CQ07589 356 aa3.97□□□□□ -1.77
snR42snR42 RTT109Q07794 436 aa3.97□□□□□ -1.77
snR42snR42 ESC8Q08119 714 aa3.97□□□□□ -1.77
snR42snR42 ELG1Q12050 791 aa3.97□□□□□ -1.77
snR42snR42 RPS9BP05755 195 aaKnown RBP3.96□□□□□ -1.78
snR42snR42 GCD1P09032 578 aaPredicted RBP3.96□□□□□ -1.78
snR42snR42 MSM1P22438 575 aa3.96□□□□□ -1.78
snR42snR42 YBR197CP38306 217 aa3.96□□□□□ -1.78
snR42snR42 HGH1P48362 394 aaKnown RBP3.96□□□□□ -1.78
snR42snR42 DNM1P54861 757 aa3.96□□□□□ -1.78
snR42snR42 SYF1Q04048 859 aaPredicted RBP3.96□□□□□ -1.78
snR42snR42 YOL057WQ08225 711 aa3.96□□□□□ -1.78
snR42snR42 NOP8Q08287 484 aaPredicted RBP3.96□□□□□ -1.78
snR42snR42 LYS2P07702 1392 aa3.95□□□□□ -1.78
snR42snR42 GAS1P22146 559 aaKnown RBP3.95□□□□□ -1.78
snR42snR42 TFA2P36145 328 aa3.95□□□□□ -1.78
snR42snR42 NUP133P36161 1157 aa3.95□□□□□ -1.78
snR42snR42 SEN54Q02825 467 aaPredicted RBP3.95□□□□□ -1.78
snR42snR42 FCP1Q03254 732 aa3.95□□□□□ -1.78
snR42snR42 FAS2P19097 1887 aaKnown RBP3.94□□□□□ -1.78
snR42snR42 FUS1P11710 512 aa3.94□□□□□ -1.78
snR42snR42 MSN1P22148 382 aa3.94□□□□□ -1.78
snR42snR42 TRM44Q02648 567 aaKnown RBP3.94□□□□□ -1.78
snR42snR42 UBP16Q02863 499 aa3.94□□□□□ -1.78
snR42snR42 SRT1Q03175 343 aa3.94□□□□□ -1.78
snR42snR42 GIS1Q03833 894 aa3.94□□□□□ -1.78
snR42snR42 EMG1Q06287 252 aaKnown RBP3.94□□□□□ -1.78
snR42snR42 NSI1Q12457 570 aa3.94□□□□□ -1.78
snR42snR42 SSK22P25390 1331 aaPredicted RBP3.94□□□□□ -1.78
snR42snR42 SUP35P05453 685 aaKnown RBP3.93□□□□□ -1.78
snR42snR42 MRP7P12687 371 aa3.93□□□□□ -1.78
snR42snR42 GIP4P39732 760 aa3.93□□□□□ -1.78
snR42snR42 FET4P40988 552 aa3.93□□□□□ -1.78
snR42snR42 MMM1P41800 426 aa3.93□□□□□ -1.78
snR42snR42 TAF1P46677 1066 aa3.93□□□□□ -1.78
snR42snR42 ERS1P17261 260 aa3.92□□□□□ -1.78
snR42snR42 AFG2P32794 780 aa3.92□□□□□ -1.78
snR42snR42 BOI1P38041 980 aaKnown RBP3.92□□□□□ -1.78
snR42snR42 YHL008CP38750 627 aa3.92□□□□□ -1.78
snR42snR42 GSM1P42950 618 aa3.92□□□□□ -1.78
snR42snR42 TIM50Q02776 476 aa3.92□□□□□ -1.78
snR42snR42 CDA2Q06703 312 aa3.92□□□□□ -1.78
snR42snR42 RRG1Q12167 365 aaPredicted RBP3.92□□□□□ -1.78
snR42snR42 SWI1P09547 1314 aa3.92□□□□□ -1.78
snR42snR42 HPR1P17629 752 aaKnown RBP3.91□□□□□ -1.78
snR42snR42 ISC10P32645 267 aa3.91□□□□□ -1.78
snR42snR42 AIM46P38885 310 aa3.91□□□□□ -1.78
snR42snR42 NEO1P40527 1151 aa3.91□□□□□ -1.78
snR42snR42 CIT3P43635 486 aa3.91□□□□□ -1.78
snR42snR42 VPS4P52917 437 aa3.91□□□□□ -1.78
snR42snR42 YGR122WP53272 402 aa3.91□□□□□ -1.78
snR42snR42 RPT4P53549 437 aaKnown RBP3.91□□□□□ -1.78
snR42snR42 HEF3P53978 1044 aaKnown RBP3.91□□□□□ -1.78
snR42snR42 UBX2Q04228 584 aa3.91□□□□□ -1.78
snR42snR42 CRF1Q04930 467 aa3.91□□□□□ -1.78
snR42snR42 THI3Q07471 609 aa3.91□□□□□ -1.78
snR42snR42 SNU66Q12420 587 aaPredicted RBP3.91□□□□□ -1.78
snR42snR42 YLR278CQ05854 1341 aa3.91□□□□□ -1.78
snR42snR42 SUI2P20459 304 aaKnown RBP3.9□□□□□ -1.79
snR42snR42 KRE2P27809 442 aa3.9□□□□□ -1.79
snR42snR42 SWC3P31376 625 aa3.9□□□□□ -1.79
snR42snR42 MGM1P32266 881 aa3.9□□□□□ -1.79
snR42snR42 TSA1P34760 196 aaKnown RBP3.9□□□□□ -1.79
snR42snR42 TGL4P36165 910 aa3.9□□□□□ -1.79
snR42snR42 FIR1P40020 876 aa3.9□□□□□ -1.79
snR42snR42 FAR11P53917 953 aa3.9□□□□□ -1.79
snR42snR42 YDR306CQ06640 478 aa3.9□□□□□ -1.79
snR42snR42 YOR059CQ08448 450 aaKnown RBP3.9□□□□□ -1.79
snR42snR42 RPP0P05317 312 aaKnown RBP3.89□□□□□ -1.79
snR42snR42 RAD24P32641 659 aa3.89□□□□□ -1.79
snR42snR42 HSP78P33416 811 aa3.89□□□□□ -1.79
snR42snR42 PEA2P40091 420 aa3.89□□□□□ -1.79
snR42snR42 VPS27P40343 622 aaKnown RBP3.89□□□□□ -1.79
snR42snR42 YJR124CP47159 448 aa3.89□□□□□ -1.79
snR42snR42 YGR117CP53270 476 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms