RNA–Protein interactions for RNA: YPR054W

SMK1, Transcript of Middle sporulation-specific mitogen-activated protein kinase (MAPK), yeastyeast

Gene SMK1, Length 1,167 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMK1YPR054W PDR18P53756 1333 aa7.51□□□□□ -1.21
SMK1YPR054W PRP16P15938 1071 aaPredicted RBP7.5□□□□□ -1.21
SMK1YPR054W PHO13P19881 312 aa7.5□□□□□ -1.21
SMK1YPR054W DPH5P32469 300 aaPredicted RBP7.5□□□□□ -1.21
SMK1YPR054W YKT6P36015 200 aaKnown RBP7.5□□□□□ -1.21
SMK1YPR054W YHL017WP38745 532 aa7.5□□□□□ -1.21
SMK1YPR054W YJR098CP47139 656 aa7.5□□□□□ -1.21
SMK1YPR054W MRPS35P53292 345 aa7.5□□□□□ -1.21
SMK1YPR054W VTC3Q02725 835 aa7.5□□□□□ -1.21
SMK1YPR054W HOT1Q03213 719 aa7.5□□□□□ -1.21
SMK1YPR054W WTM2Q12206 467 aa7.5□□□□□ -1.21
SMK1YPR054W TCB1Q12466 1186 aa7.5□□□□□ -1.21
SMK1YPR054W URB1P34241 1764 aaKnown RBP7.5□□□□□ -1.21
SMK1YPR054W MRP7P12687 371 aa7.49□□□□□ -1.21
SMK1YPR054W DAL7P21826 554 aa7.49□□□□□ -1.21
SMK1YPR054W RRP43P25359 394 aaPredicted RBP7.49□□□□□ -1.21
SMK1YPR054W CDC60P26637 1090 aaKnown RBP7.49□□□□□ -1.21
SMK1YPR054W SWC3P31376 625 aa7.49□□□□□ -1.21
SMK1YPR054W STO1P34160 861 aaKnown RBP7.49□□□□□ -1.21
SMK1YPR054W PXL1P36166 706 aa7.49□□□□□ -1.21
SMK1YPR054W OLA1P38219 394 aaKnown RBP7.49□□□□□ -1.21
SMK1YPR054W SEC9P40357 651 aa7.49□□□□□ -1.21
SMK1YPR054W YJR079WP47126 109 aa7.49□□□□□ -1.21
SMK1YPR054W SCW11P53189 542 aa7.49□□□□□ -1.21
SMK1YPR054W SPO19Q03029 223 aa7.49□□□□□ -1.21
SMK1YPR054W SDH5Q08230 162 aa7.49□□□□□ -1.21
SMK1YPR054W RPS24AP0CX31 135 aaKnown RBP7.48□□□□□ -1.21
SMK1YPR054W RPS24BP0CX32 135 aaKnown RBP7.48□□□□□ -1.21
SMK1YPR054W PMR1P13586 950 aa7.48□□□□□ -1.21
SMK1YPR054W PRE10P21242 288 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
SMK1YPR054W MRPS28P21771 286 aa7.48□□□□□ -1.21
SMK1YPR054W PUP2P32379 260 aa7.48□□□□□ -1.21
SMK1YPR054W YME2P32843 850 aa7.48□□□□□ -1.21
SMK1YPR054W YSW1P38280 609 aa7.48□□□□□ -1.21
SMK1YPR054W CCC2P38995 1004 aa7.48□□□□□ -1.21
SMK1YPR054W BUD16P39988 312 aa7.48□□□□□ -1.21
SMK1YPR054W UTP7P40055 554 aaKnown RBP7.48□□□□□ -1.21
SMK1YPR054W VID28P40547 921 aa7.48□□□□□ -1.21
SMK1YPR054W YJR142WP47173 342 aa7.48□□□□□ -1.21
SMK1YPR054W YNR029CP53729 429 aaKnown RBP7.48□□□□□ -1.21
SMK1YPR054W DNM1P54861 757 aa7.48□□□□□ -1.21
SMK1YPR054W VPS38Q05919 439 aa7.48□□□□□ -1.21
SMK1YPR054W TMA16Q08687 178 aa7.48□□□□□ -1.21
SMK1YPR054W OSH2Q12451 1283 aa7.48□□□□□ -1.21
SMK1YPR054W ENT1Q12518 454 aa7.48□□□□□ -1.21
SMK1YPR054W SMC6Q12749 1114 aa7.48□□□□□ -1.21
SMK1YPR054W NCB2Q92317 146 aa7.48□□□□□ -1.21
SMK1YPR054W NFU1P32860 256 aa7.47□□□□□ -1.21
SMK1YPR054W GLY1P37303 387 aaKnown RBP7.47□□□□□ -1.21
SMK1YPR054W TPS3P38426 1054 aaKnown RBP7.47□□□□□ -1.21
SMK1YPR054W HOS4P40480 1083 aa7.47□□□□□ -1.21
SMK1YPR054W SEC26P41810 973 aaKnown RBP7.47□□□□□ -1.21
SMK1YPR054W MIC19P43594 170 aa7.47□□□□□ -1.21
SMK1YPR054W PRP43P53131 767 aaKnown RBP7.47□□□□□ -1.21
SMK1YPR054W EIS1Q05050 843 aaKnown RBP7.47□□□□□ -1.21
SMK1YPR054W YOL057WQ08225 711 aa7.47□□□□□ -1.21
SMK1YPR054W TY1A-BLQ12266 440 aa7.47□□□□□ -1.21
SMK1YPR054W RAD1P06777 1100 aa7.46□□□□□ -1.22
SMK1YPR054W KRS1P15180 591 aaKnown RBP7.46□□□□□ -1.22
SMK1YPR054W ALD2P47771 506 aa7.46□□□□□ -1.22
SMK1YPR054W BOP3P53958 396 aa7.46□□□□□ -1.22
SMK1YPR054W GRX3Q03835 250 aa7.46□□□□□ -1.22
SMK1YPR054W UBX2Q04228 584 aa7.46□□□□□ -1.22
SMK1YPR054W YDR306CQ06640 478 aa7.46□□□□□ -1.22
SMK1YPR054W CMS1Q07897 291 aaKnown RBP7.46□□□□□ -1.22
SMK1YPR054W YVC1Q12324 675 aa7.46□□□□□ -1.22
SMK1YPR054W YOL098CQ12496 1037 aa7.46□□□□□ -1.22
SMK1YPR054W MATALPHA2P0CY08 210 aa7.45□□□□□ -1.22
SMK1YPR054W HMLALPHA2P0CY09 210 aa7.45□□□□□ -1.22
SMK1YPR054W SEC23P15303 768 aaKnown RBP7.45□□□□□ -1.22
SMK1YPR054W KAR3P17119 729 aa7.45□□□□□ -1.22
SMK1YPR054W GAL11P19659 1081 aa7.45□□□□□ -1.22
SMK1YPR054W DLD3P39976 496 aaKnown RBP7.45□□□□□ -1.22
SMK1YPR054W SLX8P40072 274 aa7.45□□□□□ -1.22
SMK1YPR054W YIR007WP40566 764 aa7.45□□□□□ -1.22
SMK1YPR054W TRS85P46944 698 aa7.45□□□□□ -1.22
SMK1YPR054W ILM1P47155 203 aa7.45□□□□□ -1.22
SMK1YPR054W MLC1P53141 149 aa7.45□□□□□ -1.22
SMK1YPR054W UBP2Q01476 1272 aa7.45□□□□□ -1.22
SMK1YPR054W IMH1Q06704 911 aaKnown RBP7.45□□□□□ -1.22
SMK1YPR054W TY4A-HQ6Q5P6 413 aa7.45□□□□□ -1.22
SMK1YPR054W MCM4P30665 933 aaKnown RBP7.44□□□□□ -1.22
SMK1YPR054W PDB1P32473 366 aaKnown RBP7.44□□□□□ -1.22
SMK1YPR054W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
SMK1YPR054W TGL4P36165 910 aa7.44□□□□□ -1.22
SMK1YPR054W TBS1P38114 1094 aa7.44□□□□□ -1.22
SMK1YPR054W ISW1P38144 1129 aa7.44□□□□□ -1.22
SMK1YPR054W YKE2P52553 114 aa7.44□□□□□ -1.22
SMK1YPR054W NSE3Q05541 303 aa7.44□□□□□ -1.22
SMK1YPR054W VAC14Q06708 880 aa7.44□□□□□ -1.22
SMK1YPR054W NOP6Q07623 225 aaKnown RBP7.44□□□□□ -1.22
SMK1YPR054W YKR018CP36114 725 aa7.43□□□□□ -1.22
SMK1YPR054W ACO2P39533 789 aa7.43□□□□□ -1.22
SMK1YPR054W MRX1P40050 688 aa7.43□□□□□ -1.22
SMK1YPR054W BUD6P41697 788 aa7.43□□□□□ -1.22
SMK1YPR054W PXA1P41909 870 aa7.43□□□□□ -1.22
SMK1YPR054W NCS2P53923 493 aaPredicted RBP7.43□□□□□ -1.22
SMK1YPR054W ALO1P54783 526 aaKnown RBP7.43□□□□□ -1.22
SMK1YPR054W CUS1Q02554 436 aaPredicted RBP7.43□□□□□ -1.22
SMK1YPR054W YLR407WQ06070 228 aa7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms