RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C MOT2P34909 587 aaKnown RBP5.69□□□□□ -1.5
CCL1YPR025C GIP4P39732 760 aa5.69□□□□□ -1.5
CCL1YPR025C CNN1P43618 361 aa5.69□□□□□ -1.5
CCL1YPR025C SPO20Q04359 397 aa5.69□□□□□ -1.5
CCL1YPR025C YLR225CQ05948 407 aaKnown RBP5.69□□□□□ -1.5
CCL1YPR025C DBP5P20449 482 aaKnown RBP5.68□□□□□ -1.5
CCL1YPR025C MLS1P30952 554 aa5.68□□□□□ -1.5
CCL1YPR025C MCM7P38132 845 aa5.68□□□□□ -1.5
CCL1YPR025C NNF1P47149 201 aa5.68□□□□□ -1.5
CCL1YPR025C EAR1Q03212 550 aa5.68□□□□□ -1.5
CCL1YPR025C INO1P11986 533 aa5.67□□□□□ -1.5
CCL1YPR025C KIP1P28742 1111 aa5.67□□□□□ -1.5
CCL1YPR025C ABD1P32783 436 aaPredicted RBP5.67□□□□□ -1.5
CCL1YPR025C YKL069WP36088 180 aa5.67□□□□□ -1.5
CCL1YPR025C ALT1P52893 592 aa5.67□□□□□ -1.5
CCL1YPR025C TPP1Q03796 238 aa5.67□□□□□ -1.5
CCL1YPR025C SSF2Q12153 453 aaPredicted RBP5.67□□□□□ -1.5
CCL1YPR025C PUF4P25339 888 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
CCL1YPR025C GRX1P25373 110 aaKnown RBP5.66□□□□□ -1.5
CCL1YPR025C WHI3P34761 661 aaKnown RBP5.66□□□□□ -1.5
CCL1YPR025C MMM1P41800 426 aa5.66□□□□□ -1.5
CCL1YPR025C ESC2Q06340 456 aa5.66□□□□□ -1.5
CCL1YPR025C TDA5Q06417 326 aaKnown RBP5.66□□□□□ -1.5
CCL1YPR025C PUS7Q08647 676 aaKnown RBP5.66□□□□□ -1.5
CCL1YPR025C RGD1P38339 666 aa5.65□□□□□ -1.5
CCL1YPR025C GPB2P39717 880 aa5.65□□□□□ -1.5
CCL1YPR025C MPH1P40562 993 aa5.65□□□□□ -1.5
CCL1YPR025C KRI1P42846 591 aaKnown RBP5.65□□□□□ -1.5
CCL1YPR025C YJL045WP47052 634 aa5.65□□□□□ -1.5
CCL1YPR025C SPO21Q12411 609 aa5.65□□□□□ -1.5
CCL1YPR025C YGL176CP46945 554 aa5.64□□□□□ -1.51
CCL1YPR025C CDA2Q06703 312 aa5.64□□□□□ -1.51
CCL1YPR025C HRK1Q08732 759 aaKnown RBP5.64□□□□□ -1.51
CCL1YPR025C YPL260WQ08977 551 aa5.64□□□□□ -1.51
CCL1YPR025C AGP1P25376 633 aa5.63□□□□□ -1.51
CCL1YPR025C SPF1P39986 1215 aaKnown RBP5.63□□□□□ -1.51
CCL1YPR025C CIT3P43635 486 aa5.63□□□□□ -1.51
CCL1YPR025C HNT2P49775 206 aa5.63□□□□□ -1.51
CCL1YPR025C RCM1P53972 490 aa5.63□□□□□ -1.51
CCL1YPR025C RKM4Q12504 494 aa5.63□□□□□ -1.51
CCL1YPR025C YER152CP10356 443 aa5.62□□□□□ -1.51
CCL1YPR025C SBA1P28707 216 aaKnown RBP5.62□□□□□ -1.51
CCL1YPR025C YKL107WP34251 309 aa5.62□□□□□ -1.51
CCL1YPR025C VBA5P36172 582 aa5.62□□□□□ -1.51
CCL1YPR025C YPL066WQ12194 479 aa5.62□□□□□ -1.51
CCL1YPR025C YVC1Q12324 675 aa5.62□□□□□ -1.51
CCL1YPR025C NSI1Q12457 570 aa5.62□□□□□ -1.51
CCL1YPR025C PIN4P34217 668 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
CCL1YPR025C OCA5P38738 679 aa5.61□□□□□ -1.51
CCL1YPR025C HOS3Q02959 697 aaKnown RBP5.61□□□□□ -1.51
CCL1YPR025C SPP382Q06411 708 aaPredicted RBP5.61□□□□□ -1.51
CCL1YPR025C YOR059CQ08448 450 aaKnown RBP5.61□□□□□ -1.51
CCL1YPR025C GNT1Q12096 491 aa5.61□□□□□ -1.51
CCL1YPR025C YSC84P32793 468 aa5.6□□□□□ -1.51
CCL1YPR025C YBR184WP38299 523 aa5.6□□□□□ -1.51
CCL1YPR025C SHE9Q04172 456 aa5.6□□□□□ -1.51
CCL1YPR025C YOL098CQ12496 1037 aa5.6□□□□□ -1.51
CCL1YPR025C STE5P32917 917 aa5.59□□□□□ -1.51
CCL1YPR025C HSP78P33416 811 aa5.59□□□□□ -1.51
CCL1YPR025C TSA1P34760 196 aaKnown RBP5.59□□□□□ -1.51
CCL1YPR025C MBP1P39678 833 aa5.59□□□□□ -1.51
CCL1YPR025C SNF7P39929 240 aaKnown RBP5.59□□□□□ -1.51
CCL1YPR025C YJL049WP47048 450 aa5.59□□□□□ -1.51
CCL1YPR025C NAN1Q02931 896 aaKnown RBP5.59□□□□□ -1.51
CCL1YPR025C RAD4P14736 754 aa5.58□□□□□ -1.52
CCL1YPR025C SRP40P32583 406 aaPredicted RBP5.58□□□□□ -1.52
CCL1YPR025C MRP8P35719 219 aa5.58□□□□□ -1.52
CCL1YPR025C YHL012WP38709 493 aa5.58□□□□□ -1.52
CCL1YPR025C TAT2P38967 592 aa5.58□□□□□ -1.52
CCL1YPR025C MXR1P40029 184 aa5.58□□□□□ -1.52
CCL1YPR025C TNA1P53322 534 aa5.58□□□□□ -1.52
CCL1YPR025C TRE1Q08919 783 aa5.58□□□□□ -1.52
CCL1YPR025C RPL11AP0C0W9 174 aaKnown RBP5.57□□□□□ -1.52
CCL1YPR025C DBP2P24783 546 aaKnown RBP5.57□□□□□ -1.52
CCL1YPR025C THI80P35202 319 aa5.57□□□□□ -1.52
CCL1YPR025C RPN3P40016 523 aaKnown RBP5.57□□□□□ -1.52
CCL1YPR025C OYE3P41816 400 aaPredicted RBP5.57□□□□□ -1.52
CCL1YPR025C RCL1Q08096 367 aaPredicted RBP5.57□□□□□ -1.52
CCL1YPR025C RPL11BQ3E757 174 aaPredicted RBP5.57□□□□□ -1.52
CCL1YPR025C COQ4O13525 335 aa5.56□□□□□ -1.52
CCL1YPR025C SAM35P14693 329 aa5.56□□□□□ -1.52
CCL1YPR025C PBY1P38254 753 aa5.56□□□□□ -1.52
CCL1YPR025C PNT1P38969 423 aa5.56□□□□□ -1.52
CCL1YPR025C PEX7P39108 375 aa5.56□□□□□ -1.52
CCL1YPR025C SIP5P40210 489 aaKnown RBP5.56□□□□□ -1.52
CCL1YPR025C IRR1P40541 1150 aa5.56□□□□□ -1.52
CCL1YPR025C YFL054CP43549 646 aa5.56□□□□□ -1.52
CCL1YPR025C IOC3P43596 787 aa5.56□□□□□ -1.52
CCL1YPR025C HUL5P53119 910 aa5.56□□□□□ -1.52
CCL1YPR025C NSE3Q05541 303 aa5.56□□□□□ -1.52
CCL1YPR025C SPO75Q07798 868 aa5.56□□□□□ -1.52
CCL1YPR025C MDL2P33311 773 aa5.55□□□□□ -1.52
CCL1YPR025C PTC7P38797 343 aa5.55□□□□□ -1.52
CCL1YPR025C GTS1P40956 396 aa5.55□□□□□ -1.52
CCL1YPR025C TIM54P47045 478 aa5.55□□□□□ -1.52
CCL1YPR025C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
CCL1YPR025C CDC53Q12018 815 aaKnown RBP5.55□□□□□ -1.52
CCL1YPR025C SNF5P18480 905 aa5.54□□□□□ -1.52
CCL1YPR025C SRO9P25567 434 aaKnown RBP5.54□□□□□ -1.52
CCL1YPR025C PRO1P32264 428 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms