RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.64□□□□□ -1.67not detected
UBP16YPL072W RCL1Q08096 367 aaPredicted RBP4.64□□□□□ -1.67
UBP16YPL072W CCZ1P38273 704 aa4.63□□□□□ -1.67
UBP16YPL072W ETP1P38748 585 aaKnown RBP4.63□□□□□ -1.67
UBP16YPL072W RMD1Q03441 430 aa4.63□□□□□ -1.67
UBP16YPL072W SPO21Q12411 609 aa4.63□□□□□ -1.67
UBP16YPL072W SYP1P25623 870 aaKnown RBP4.62□□□□□ -1.67
UBP16YPL072W RGD1P38339 666 aa4.62□□□□□ -1.67
UBP16YPL072W ENV11P53246 860 aa4.62□□□□□ -1.67
UBP16YPL072W SPS1P08458 490 aa4.62□□□□□ -1.67
UBP16YPL072W SNF5P18480 905 aa4.62□□□□□ -1.67
UBP16YPL072W PRP6P19735 899 aaPredicted RBP4.62□□□□□ -1.67
UBP16YPL072W PIK1P39104 1066 aa4.62□□□□□ -1.67
UBP16YPL072W CNN1P43618 361 aa4.62□□□□□ -1.67
UBP16YPL072W PUF4P25339 888 aaKnown RBP RIP-Chip data4.61□□□□□ -1.67not detected
UBP16YPL072W PEP7P32609 515 aa4.61□□□□□ -1.67
UBP16YPL072W THI80P35202 319 aa4.61□□□□□ -1.67
UBP16YPL072W SNO2P53823 222 aa4.61□□□□□ -1.67
UBP16YPL072W RTT10Q08924 1013 aa4.61□□□□□ -1.67
UBP16YPL072W DBP5P20449 482 aaKnown RBP4.6□□□□□ -1.67
UBP16YPL072W RSB1Q08417 382 aa4.6□□□□□ -1.67
UBP16YPL072W RAD27P26793 382 aa4.59□□□□□ -1.67
UBP16YPL072W AIM3P38266 947 aaKnown RBP4.59□□□□□ -1.67
UBP16YPL072W SEC26P41810 973 aaKnown RBP4.59□□□□□ -1.67
UBP16YPL072W RIM8P53179 542 aa4.59□□□□□ -1.67
UBP16YPL072W OYE2Q03558 400 aaKnown RBP4.59□□□□□ -1.67
UBP16YPL072W SOD2P00447 233 aa4.58□□□□□ -1.68
UBP16YPL072W YER152CP10356 443 aa4.58□□□□□ -1.68
UBP16YPL072W MLS1P30952 554 aa4.58□□□□□ -1.68
UBP16YPL072W RER2P35196 286 aa4.58□□□□□ -1.68
UBP16YPL072W MPH1P40562 993 aa4.58□□□□□ -1.68
UBP16YPL072W TMA46Q12000 345 aaKnown RBP4.58□□□□□ -1.68
UBP16YPL072W HNT2P49775 206 aa4.56□□□□□ -1.68
UBP16YPL072W TIF35Q04067 274 aaKnown RBP4.56□□□□□ -1.68
UBP16YPL072W ESC8Q08119 714 aa4.56□□□□□ -1.68
UBP16YPL072W RPS13P05756 151 aaKnown RBP4.56□□□□□ -1.68
UBP16YPL072W YCR015CP25616 317 aa4.56□□□□□ -1.68
UBP16YPL072W DUT1P33317 147 aa4.56□□□□□ -1.68
UBP16YPL072W ABZ1P37254 787 aaPredicted RBP4.56□□□□□ -1.68
UBP16YPL072W YFL054CP43549 646 aa4.56□□□□□ -1.68
UBP16YPL072W YPL277CQ08989 487 aa4.56□□□□□ -1.68
UBP16YPL072W PET112P33893 541 aa4.55□□□□□ -1.68
UBP16YPL072W SGD1Q06132 899 aa4.55□□□□□ -1.68
UBP16YPL072W GNT1Q12096 491 aa4.55□□□□□ -1.68
UBP16YPL072W CDC34P14682 295 aa4.54□□□□□ -1.68
UBP16YPL072W MNR2P35724 969 aa4.54□□□□□ -1.68
UBP16YPL072W FLR1P38124 548 aa4.54□□□□□ -1.68
UBP16YPL072W YOR352WQ08816 343 aa4.54□□□□□ -1.68
UBP16YPL072W CYC1P00044 109 aaPredicted RBP4.53□□□□□ -1.68
UBP16YPL072W LYP1P32487 611 aa4.53□□□□□ -1.68
UBP16YPL072W TOD6P34219 525 aa4.53□□□□□ -1.68
UBP16YPL072W MCM7P38132 845 aa4.53□□□□□ -1.68
UBP16YPL072W RFC5P38251 354 aa4.53□□□□□ -1.68
UBP16YPL072W LAM1P38851 1228 aa4.53□□□□□ -1.68
UBP16YPL072W MET10P39692 1035 aa4.53□□□□□ -1.68
UBP16YPL072W TAF1P46677 1066 aa4.53□□□□□ -1.68
UBP16YPL072W YDR132CQ03900 495 aa4.53□□□□□ -1.68
UBP16YPL072W RSM24Q03976 319 aa4.53□□□□□ -1.68
UBP16YPL072W ATG13Q06628 738 aa4.53□□□□□ -1.68
UBP16YPL072W TRP2P00899 507 aaKnown RBP4.52□□□□□ -1.69
UBP16YPL072W BAS1P22035 811 aa4.52□□□□□ -1.69
UBP16YPL072W YKL222CP35995 705 aa4.52□□□□□ -1.69
UBP16YPL072W EEB1Q02891 456 aa4.52□□□□□ -1.69
UBP16YPL072W SVS1Q12254 260 aa4.52□□□□□ -1.69
UBP16YPL072W RPL11AP0C0W9 174 aaKnown RBP4.51□□□□□ -1.69
UBP16YPL072W MEF2P39677 819 aa4.51□□□□□ -1.69
UBP16YPL072W GIP4P39732 760 aa4.51□□□□□ -1.69
UBP16YPL072W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
UBP16YPL072W ACM1Q08981 209 aa4.51□□□□□ -1.69
UBP16YPL072W RPL11BQ3E757 174 aaPredicted RBP4.51□□□□□ -1.69
UBP16YPL072W GEM1P39722 662 aa4.51□□□□□ -1.69
UBP16YPL072W MXR1P40029 184 aa4.51□□□□□ -1.69
UBP16YPL072W TYW3P53177 273 aa4.51□□□□□ -1.69
UBP16YPL072W GCN5Q03330 439 aa4.51□□□□□ -1.69
UBP16YPL072W YLR358CO13565 187 aa4.5□□□□□ -1.69
UBP16YPL072W KIN2P13186 1147 aaKnown RBP4.5□□□□□ -1.69
UBP16YPL072W PRE10P21242 288 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
UBP16YPL072W SRM1P21827 482 aa4.5□□□□□ -1.69
UBP16YPL072W DBP2P24783 546 aaKnown RBP4.5□□□□□ -1.69
UBP16YPL072W UGA2P38067 497 aa4.5□□□□□ -1.69
UBP16YPL072W PNT1P38969 423 aa4.5□□□□□ -1.69
UBP16YPL072W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
UBP16YPL072W RIB2Q12362 591 aaKnown RBP4.5□□□□□ -1.69
UBP16YPL072W RKM4Q12504 494 aa4.5□□□□□ -1.69
UBP16YPL072W GAL10P04397 699 aa4.49□□□□□ -1.69
UBP16YPL072W ACE2P21192 770 aa4.49□□□□□ -1.69
UBP16YPL072W SLA2P33338 968 aa4.49□□□□□ -1.69
UBP16YPL072W YGR053CP53234 283 aa4.49□□□□□ -1.69
UBP16YPL072W PLB2Q03674 706 aa4.49□□□□□ -1.69
UBP16YPL072W ROT1Q03691 256 aa4.49□□□□□ -1.69
UBP16YPL072W SIZ1Q04195 904 aa4.49□□□□□ -1.69
UBP16YPL072W DUS4Q06063 367 aa4.49□□□□□ -1.69
UBP16YPL072W SPP382Q06411 708 aaPredicted RBP4.49□□□□□ -1.69
UBP16YPL072W THS1P04801 734 aaKnown RBP4.48□□□□□ -1.69
UBP16YPL072W INO1P11986 533 aa4.48□□□□□ -1.69
UBP16YPL072W CMP2P14747 604 aa4.48□□□□□ -1.69
UBP16YPL072W APL1P27351 700 aa4.48□□□□□ -1.69
UBP16YPL072W RRT14P40470 206 aa4.48□□□□□ -1.69
UBP16YPL072W SPT20P50875 604 aa4.48□□□□□ -1.69
UBP16YPL072W CLU1Q03690 1277 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms