RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	SNF3	P10870	884 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	UTR2	P32623	467 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	MDL2	P33311	773 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	PTK1	P36002	662 aa	Predicted RBP	2.93	□□□□□ -1.94
VTC3	YPL019C	YBL028C	P38202	106 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	AIM21	P40563	679 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	DFG5	Q05031	458 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	PHO4	P07270	312 aa	Known RBP	2.93	□□□□□ -1.94
VTC3	YPL019C	PIF1	P07271	859 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	RAD24	P32641	659 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	MKS1	P34072	584 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	BOI2	P39969	1040 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	MXR1	P40029	184 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	FYV10	P40492	516 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	YPL034W	Q03083	165 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	MET32	Q12041	191 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	RRI2	Q12348	645 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	YOR131C	Q12486	218 aa		2.93	□□□□□ -1.94
VTC3	YPL019C	TUB2	P02557	457 aa	Known RBP	2.92	□□□□□ -1.94
VTC3	YPL019C	YIR042C	P40586	236 aa		2.92	□□□□□ -1.94
VTC3	YPL019C	TRS120	Q04183	1289 aa		2.92	□□□□□ -1.94
VTC3	YPL019C	INM2	Q05533	292 aa		2.92	□□□□□ -1.94
VTC3	YPL019C	SEC18	P18759	758 aa	Known RBP	2.92	□□□□□ -1.94
VTC3	YPL019C	PER1	P25625	357 aa		2.92	□□□□□ -1.94
VTC3	YPL019C	MRF1	P30775	413 aa	Predicted RBP	2.92	□□□□□ -1.94
VTC3	YPL019C	UIP5	P36137	443 aa		2.92	□□□□□ -1.94
VTC3	YPL019C	MSC7	P38694	644 aa		2.92	□□□□□ -1.94
VTC3	YPL019C	PIP2	P52960	996 aa		2.92	□□□□□ -1.94
VTC3	YPL019C	YAF9	P53930	226 aa		2.92	□□□□□ -1.94
VTC3	YPL019C	OYE2	Q03558	400 aa	Known RBP	2.92	□□□□□ -1.94
VTC3	YPL019C	MAG2	Q06436	670 aa	Known RBP	2.92	□□□□□ -1.94
VTC3	YPL019C	MET7	Q08645	548 aa		2.92	□□□□□ -1.94
VTC3	YPL019C	YMR084W	A2P2R3	262 aa		2.91	□□□□□ -1.94
VTC3	YPL019C	CYB2	P00175	591 aa		2.91	□□□□□ -1.94
VTC3	YPL019C	RPS31	P05759	152 aa	Known RBP	2.91	□□□□□ -1.94
VTC3	YPL019C	MRPL33	P20084	86 aa		2.91	□□□□□ -1.94
VTC3	YPL019C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.91	□□□□□ -1.94	not detected
VTC3	YPL019C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	2.91	□□□□□ -1.94	not detected
VTC3	YPL019C	FUN12	P39730	1002 aa	Known RBP	2.91	□□□□□ -1.94
VTC3	YPL019C	YDL124W	Q07551	312 aa	Known RBP	2.91	□□□□□ -1.94
VTC3	YPL019C	SUT2	Q12286	268 aa		2.91	□□□□□ -1.94
VTC3	YPL019C	RAS1	P01119	309 aa		2.91	□□□□□ -1.94
VTC3	YPL019C	MCM2	P29469	868 aa		2.91	□□□□□ -1.94
VTC3	YPL019C	EUG1	P32474	517 aa		2.91	□□□□□ -1.94
VTC3	YPL019C	MET1	P36150	593 aa		2.91	□□□□□ -1.94
VTC3	YPL019C	SHM1	P37292	490 aa	Predicted RBP	2.91	□□□□□ -1.94
VTC3	YPL019C	SSN3	P39073	555 aa		2.91	□□□□□ -1.94
VTC3	YPL019C	DAK2	P43550	591 aa		2.91	□□□□□ -1.94
VTC3	YPL019C	MDM20	Q12387	796 aa	Known RBP	2.91	□□□□□ -1.94
VTC3	YPL019C	AHC1	Q12433	566 aa		2.91	□□□□□ -1.94
VTC3	YPL019C	RPS19A	P07280	144 aa	Known RBP	2.9	□□□□□ -1.94
VTC3	YPL019C	RPS19B	P07281	144 aa	Predicted RBP	2.9	□□□□□ -1.94
VTC3	YPL019C	DAT1	P13483	248 aa	Known RBP	2.9	□□□□□ -1.94
VTC3	YPL019C	DAL5	P15365	543 aa		2.9	□□□□□ -1.94
VTC3	YPL019C	VMA2	P16140	517 aa	Known RBP	2.9	□□□□□ -1.94
VTC3	YPL019C	CST26	P38226	397 aa		2.9	□□□□□ -1.94
VTC3	YPL019C	GPB2	P39717	880 aa		2.9	□□□□□ -1.94
VTC3	YPL019C	AIR1	P40507	360 aa	Known RBP	2.9	□□□□□ -1.94
VTC3	YPL019C	SUM1	P46676	1062 aa		2.9	□□□□□ -1.94
VTC3	YPL019C	HED1	Q03937	162 aa		2.9	□□□□□ -1.94
VTC3	YPL019C	SPR28	Q04921	423 aa		2.9	□□□□□ -1.94
VTC3	YPL019C	TUS1	Q06412	1307 aa		2.9	□□□□□ -1.95
VTC3	YPL019C	MCM1	P11746	286 aa		2.9	□□□□□ -1.95
VTC3	YPL019C	VMA3	P25515	160 aa		2.9	□□□□□ -1.95
VTC3	YPL019C	RGT1	P32862	1170 aa		2.9	□□□□□ -1.95
VTC3	YPL019C	OCA5	P38738	679 aa		2.9	□□□□□ -1.95
VTC3	YPL019C	BRE5	P53741	515 aa	Known RBP	2.9	□□□□□ -1.95
VTC3	YPL019C	YNL193W	P53870	558 aa		2.9	□□□□□ -1.95
VTC3	YPL019C	NSG2	P53898	299 aa		2.9	□□□□□ -1.95
VTC3	YPL019C	CSI1	Q04368	295 aa		2.9	□□□□□ -1.95
VTC3	YPL019C	UBX5	Q06682	500 aa		2.9	□□□□□ -1.95
VTC3	YPL019C	KEL3	Q08979	651 aa	Predicted RBP	2.9	□□□□□ -1.95
VTC3	YPL019C	TY1A-DR3	Q12441	440 aa		2.9	□□□□□ -1.95
VTC3	YPL019C	RPP0	P05317	312 aa	Known RBP	2.89	□□□□□ -1.95
VTC3	YPL019C	ASF1	P32447	279 aa		2.89	□□□□□ -1.95
VTC3	YPL019C	LAP2	Q10740	671 aa		2.89	□□□□□ -1.95
VTC3	YPL019C	CDC19	P00549	500 aa	Known RBP	2.89	□□□□□ -1.95
VTC3	YPL019C	AMS1	P22855	1083 aa		2.89	□□□□□ -1.95
VTC3	YPL019C	SLA1	P32790	1244 aa		2.89	□□□□□ -1.95
VTC3	YPL019C	YKR018C	P36114	725 aa		2.89	□□□□□ -1.95
VTC3	YPL019C	KSP1	P38691	1029 aa	Known RBP	2.89	□□□□□ -1.95
VTC3	YPL019C	TOM71	P38825	639 aa	Known RBP	2.89	□□□□□ -1.95
VTC3	YPL019C	AFG3	P39925	761 aa		2.89	□□□□□ -1.95
VTC3	YPL019C	TIF4631	P39935	952 aa	Known RBP	2.89	□□□□□ -1.95
VTC3	YPL019C	RGD2	P43556	714 aa		2.89	□□□□□ -1.95
VTC3	YPL019C	SUT1	P53032	299 aa	Known RBP	2.89	□□□□□ -1.95
VTC3	YPL019C	YML037C	Q03703	340 aa		2.89	□□□□□ -1.95
VTC3	YPL019C	RPN7	Q06103	429 aa	Known RBP	2.89	□□□□□ -1.95
VTC3	YPL019C	PRE8	P23639	250 aa		2.88	□□□□□ -1.95
VTC3	YPL019C	BDS1	Q08347	646 aa		2.88	□□□□□ -1.95
VTC3	YPL019C	Q0182	Q9ZZW1	134 aa		2.88	□□□□□ -1.95
VTC3	YPL019C	KRS1	P15180	591 aa	Known RBP	2.88	□□□□□ -1.95
VTC3	YPL019C	SUI2	P20459	304 aa	Known RBP	2.88	□□□□□ -1.95
VTC3	YPL019C	MLF3	P32047	452 aa		2.88	□□□□□ -1.95
VTC3	YPL019C	RPT1	P33299	467 aa	Known RBP	2.88	□□□□□ -1.95
VTC3	YPL019C	GRX7	P38068	203 aa		2.88	□□□□□ -1.95
VTC3	YPL019C	RSC4	Q02206	625 aa		2.88	□□□□□ -1.95
VTC3	YPL019C	YPL260W	Q08977	551 aa		2.88	□□□□□ -1.95
VTC3	YPL019C	NCB2	Q92317	146 aa		2.88	□□□□□ -1.95
VTC3	YPL019C	ECM29	P38737	1868 aa		2.88	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 37 ms