RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A YFL054CP43549 646 aa4.93□□□□□ -1.62
YOR343W-AYOR343W-A ENT3P47160 408 aa4.93□□□□□ -1.62
YOR343W-AYOR343W-A TNA1P53322 534 aa4.93□□□□□ -1.62
YOR343W-AYOR343W-A UBP3Q01477 912 aaKnown RBP RIP-Chip data4.93□□□□□ -1.62not detected
YOR343W-AYOR343W-A YDR132CQ03900 495 aa4.93□□□□□ -1.62
YOR343W-AYOR343W-A SOD2P00447 233 aa4.92□□□□□ -1.62
YOR343W-AYOR343W-A SEC8P32855 1065 aa4.92□□□□□ -1.62
YOR343W-AYOR343W-A PIK1P39104 1066 aa4.92□□□□□ -1.62
YOR343W-AYOR343W-A GIP4P39732 760 aa4.92□□□□□ -1.62
YOR343W-AYOR343W-A FOL2P51601 243 aaKnown RBP4.92□□□□□ -1.62
YOR343W-AYOR343W-A SNO2P53823 222 aa4.92□□□□□ -1.62
YOR343W-AYOR343W-A HOS3Q02959 697 aaKnown RBP4.92□□□□□ -1.62
YOR343W-AYOR343W-A SPO21Q12411 609 aa4.92□□□□□ -1.62
YOR343W-AYOR343W-A GCR1P07261 785 aa4.91□□□□□ -1.62
YOR343W-AYOR343W-A SPS1P08458 490 aa4.91□□□□□ -1.62
YOR343W-AYOR343W-A YKL222CP35995 705 aa4.91□□□□□ -1.62
YOR343W-AYOR343W-A YPL260WQ08977 551 aa4.91□□□□□ -1.62
YOR343W-AYOR343W-A RPS13P05756 151 aaKnown RBP4.9□□□□□ -1.63
YOR343W-AYOR343W-A TOD6P34219 525 aa4.9□□□□□ -1.63
YOR343W-AYOR343W-A CCZ1P38273 704 aa4.9□□□□□ -1.63
YOR343W-AYOR343W-A MRL1Q06815 381 aa4.9□□□□□ -1.63
YOR343W-AYOR343W-A NBA1Q08229 501 aaKnown RBP4.9□□□□□ -1.63
YOR343W-AYOR343W-A YER152CP10356 443 aa4.89□□□□□ -1.63
YOR343W-AYOR343W-A RGD1P38339 666 aa4.89□□□□□ -1.63
YOR343W-AYOR343W-A MGE1P38523 228 aa4.89□□□□□ -1.63
YOR343W-AYOR343W-A DBP5P20449 482 aaKnown RBP4.88□□□□□ -1.63
YOR343W-AYOR343W-A SEC26P41810 973 aaKnown RBP4.88□□□□□ -1.63
YOR343W-AYOR343W-A ENV11P53246 860 aa4.88□□□□□ -1.63
YOR343W-AYOR343W-A RIB2Q12362 591 aaKnown RBP4.88□□□□□ -1.63
YOR343W-AYOR343W-A SRM1P21827 482 aa4.87□□□□□ -1.63
YOR343W-AYOR343W-A SYP1P25623 870 aaKnown RBP4.87□□□□□ -1.63
YOR343W-AYOR343W-A MLS1P30952 554 aa4.87□□□□□ -1.63
YOR343W-AYOR343W-A MPH1P40562 993 aa4.87□□□□□ -1.63
YOR343W-AYOR343W-A CNN1P43618 361 aa4.87□□□□□ -1.63
YOR343W-AYOR343W-A PRE10P21242 288 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
YOR343W-AYOR343W-A PLB2Q03674 706 aa4.86□□□□□ -1.63
YOR343W-AYOR343W-A SGD1Q06132 899 aa4.86□□□□□ -1.63
YOR343W-AYOR343W-A CYC1P00044 109 aaPredicted RBP4.85□□□□□ -1.63
YOR343W-AYOR343W-A HEM3P28789 327 aa4.85□□□□□ -1.63
YOR343W-AYOR343W-A DUT1P33317 147 aa4.85□□□□□ -1.63
YOR343W-AYOR343W-A RER2P35196 286 aa4.85□□□□□ -1.63
YOR343W-AYOR343W-A LAM1P38851 1228 aa4.85□□□□□ -1.63
YOR343W-AYOR343W-A GCN5Q03330 439 aa4.85□□□□□ -1.63
YOR343W-AYOR343W-A CLU1Q03690 1277 aaKnown RBP4.85□□□□□ -1.63
YOR343W-AYOR343W-A DUS4Q06063 367 aa4.85□□□□□ -1.63
YOR343W-AYOR343W-A ESF1Q06344 628 aaKnown RBP4.85□□□□□ -1.63
YOR343W-AYOR343W-A ASF1P32447 279 aa4.84□□□□□ -1.63
YOR343W-AYOR343W-A MEF2P39677 819 aa4.84□□□□□ -1.63
YOR343W-AYOR343W-A TIF35Q04067 274 aaKnown RBP4.84□□□□□ -1.63
YOR343W-AYOR343W-A RSB1Q08417 382 aa4.84□□□□□ -1.63
YOR343W-AYOR343W-A PUF4P25339 888 aaKnown RBP RIP-Chip data4.83□□□□□ -1.64not detected
YOR343W-AYOR343W-A CTS1P29029 562 aa4.83□□□□□ -1.64
YOR343W-AYOR343W-A RTT10Q08924 1013 aa4.83□□□□□ -1.64
YOR343W-AYOR343W-A GAL10P04397 699 aa4.82□□□□□ -1.64
YOR343W-AYOR343W-A CDC6P09119 513 aa4.82□□□□□ -1.64
YOR343W-AYOR343W-A SPT20P50875 604 aa4.82□□□□□ -1.64
YOR343W-AYOR343W-A ROT1Q03691 256 aa4.82□□□□□ -1.64
YOR343W-AYOR343W-A HNT2P49775 206 aa4.81□□□□□ -1.64
YOR343W-AYOR343W-A EEB1Q02891 456 aa4.81□□□□□ -1.64
YOR343W-AYOR343W-A ATG13Q06628 738 aa4.81□□□□□ -1.64
YOR343W-AYOR343W-A BAS1P22035 811 aa4.8□□□□□ -1.64
YOR343W-AYOR343W-A DBP2P24783 546 aaKnown RBP4.8□□□□□ -1.64
YOR343W-AYOR343W-A RFC5P38251 354 aa4.8□□□□□ -1.64
YOR343W-AYOR343W-A MXR1P40029 184 aa4.8□□□□□ -1.64
YOR343W-AYOR343W-A MAP1Q01662 387 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
YOR343W-AYOR343W-A RMD1Q03441 430 aa4.8□□□□□ -1.64
YOR343W-AYOR343W-A SIZ1Q04195 904 aa4.8□□□□□ -1.64
YOR343W-AYOR343W-A GNT1Q12096 491 aa4.8□□□□□ -1.64
YOR343W-AYOR343W-A SVS1Q12254 260 aa4.8□□□□□ -1.64
YOR343W-AYOR343W-A YLR358CO13565 187 aa4.79□□□□□ -1.64
YOR343W-AYOR343W-A RPL11AP0C0W9 174 aaKnown RBP4.79□□□□□ -1.64
YOR343W-AYOR343W-A CMP2P14747 604 aa4.79□□□□□ -1.64
YOR343W-AYOR343W-A PEP7P32609 515 aa4.79□□□□□ -1.64
YOR343W-AYOR343W-A DOM34P33309 386 aa4.79□□□□□ -1.64
YOR343W-AYOR343W-A OYE2Q03558 400 aaKnown RBP4.79□□□□□ -1.64
YOR343W-AYOR343W-A YPL066WQ12194 479 aa4.79□□□□□ -1.64
YOR343W-AYOR343W-A RPL11BQ3E757 174 aaPredicted RBP4.79□□□□□ -1.64
YOR343W-AYOR343W-A TRP2P00899 507 aaKnown RBP4.78□□□□□ -1.64
YOR343W-AYOR343W-A CDC34P14682 295 aa4.78□□□□□ -1.64
YOR343W-AYOR343W-A CDC20P26309 610 aa4.78□□□□□ -1.64
YOR343W-AYOR343W-A SLA2P33338 968 aa4.78□□□□□ -1.64
YOR343W-AYOR343W-A SHM2P37291 469 aaKnown RBP4.78□□□□□ -1.64
YOR343W-AYOR343W-A MCM7P38132 845 aa4.78□□□□□ -1.64
YOR343W-AYOR343W-A PNT1P38969 423 aa4.78□□□□□ -1.64
YOR343W-AYOR343W-A RSM24Q03976 319 aa4.78□□□□□ -1.64
YOR343W-AYOR343W-A ACE2P21192 770 aa4.77□□□□□ -1.65
YOR343W-AYOR343W-A LYP1P32487 611 aa4.77□□□□□ -1.65
YOR343W-AYOR343W-A TAT2P38967 592 aa4.77□□□□□ -1.65
YOR343W-AYOR343W-A NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
YOR343W-AYOR343W-A BI4P03879 638 aa4.76□□□□□ -1.65
YOR343W-AYOR343W-A RAD27P26793 382 aa4.76□□□□□ -1.65
YOR343W-AYOR343W-A UGA2P38067 497 aa4.76□□□□□ -1.65
YOR343W-AYOR343W-A VPS62P53285 467 aa4.76□□□□□ -1.65
YOR343W-AYOR343W-A YOR352WQ08816 343 aa4.76□□□□□ -1.65
YOR343W-AYOR343W-A VTS1Q08831 523 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
YOR343W-AYOR343W-A TMA46Q12000 345 aaKnown RBP4.76□□□□□ -1.65
YOR343W-AYOR343W-A APL1P27351 700 aa4.75□□□□□ -1.65
YOR343W-AYOR343W-A LST4P34239 828 aa4.75□□□□□ -1.65
YOR343W-AYOR343W-A MET10P39692 1035 aa4.75□□□□□ -1.65
YOR343W-AYOR343W-A HFM1P51979 1187 aa4.75□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms