RNA–Protein interactions for RNA: YOR042W

CUE5, Transcript of Ubiquitin-binding protein, yeast

Gene CUE5, Length 1,236 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE5	YOR042W	CTT1	P06115	562 aa		5.89	□□□□□ -1.47
CUE5	YOR042W	FRD1	P32614	470 aa	Known RBP	5.89	□□□□□ -1.47
CUE5	YOR042W	PPX1	P38698	397 aa		5.89	□□□□□ -1.47
CUE5	YOR042W	YER156C	P40093	338 aa	Known RBP	5.89	□□□□□ -1.47
CUE5	YOR042W	YNR040W	P53736	256 aa		5.89	□□□□□ -1.47
CUE5	YOR042W	KIN4	Q01919	800 aa		5.89	□□□□□ -1.47
CUE5	YOR042W	SYT1	Q06836	1226 aa		5.89	□□□□□ -1.47
CUE5	YOR042W	SNU66	Q12420	587 aa	Predicted RBP	5.89	□□□□□ -1.47
CUE5	YOR042W	DPH6	Q12429	685 aa		5.89	□□□□□ -1.47
CUE5	YOR042W	GSC2	P40989	1895 aa		5.88	□□□□□ -1.47
CUE5	YOR042W	IRS4	P36115	615 aa	Known RBP	5.88	□□□□□ -1.47
CUE5	YOR042W	YNL011C	P53980	444 aa		5.88	□□□□□ -1.47
CUE5	YOR042W	HEH2	Q03281	663 aa		5.88	□□□□□ -1.47
CUE5	YOR042W	THI3	Q07471	609 aa		5.88	□□□□□ -1.47
CUE5	YOR042W	MNL2	Q12205	849 aa		5.88	□□□□□ -1.47
CUE5	YOR042W	TIF6	Q12522	245 aa	Known RBP	5.88	□□□□□ -1.47
CUE5	YOR042W	NCB2	Q92317	146 aa		5.88	□□□□□ -1.47
CUE5	YOR042W	ADR1	P07248	1323 aa		5.88	□□□□□ -1.47
CUE5	YOR042W	POM152	P39685	1337 aa		5.88	□□□□□ -1.47
CUE5	YOR042W	HEM3	P28789	327 aa		5.87	□□□□□ -1.47
CUE5	YOR042W	AIM46	P38885	310 aa		5.87	□□□□□ -1.47
CUE5	YOR042W	ICP55	P40051	511 aa		5.87	□□□□□ -1.47
CUE5	YOR042W	PSY2	P40164	858 aa		5.87	□□□□□ -1.47
CUE5	YOR042W	LYS5	P50113	272 aa		5.87	□□□□□ -1.47
CUE5	YOR042W	ECM16	Q04217	1267 aa	Known RBP	5.87	□□□□□ -1.47
CUE5	YOR042W	EMG1	Q06287	252 aa	Known RBP	5.87	□□□□□ -1.47
CUE5	YOR042W	PDR18	P53756	1333 aa		5.86	□□□□□ -1.47
CUE5	YOR042W	MGM1	P32266	881 aa		5.86	□□□□□ -1.47
CUE5	YOR042W	RFC1	P38630	861 aa	Known RBP	5.86	□□□□□ -1.47
CUE5	YOR042W	MSC7	P38694	644 aa		5.86	□□□□□ -1.47
CUE5	YOR042W	YIL165C	P40446	119 aa		5.86	□□□□□ -1.47
CUE5	YOR042W	NKP2	Q06162	153 aa		5.86	□□□□□ -1.47
CUE5	YOR042W	GRX6	Q12438	231 aa		5.86	□□□□□ -1.47
CUE5	YOR042W	NOT3	P06102	836 aa	Known RBP	5.85	□□□□□ -1.47
CUE5	YOR042W	CDC16	P09798	840 aa		5.85	□□□□□ -1.47
CUE5	YOR042W	SEC18	P18759	758 aa	Known RBP	5.85	□□□□□ -1.47
CUE5	YOR042W	KTR3	P38130	404 aa	Predicted RBP	5.85	□□□□□ -1.47
CUE5	YOR042W	ECM21	P38167	1117 aa	Known RBP	5.85	□□□□□ -1.47
CUE5	YOR042W	SPL2	P38839	148 aa		5.85	□□□□□ -1.47
CUE5	YOR042W	NOP2	P40991	618 aa	Known RBP	5.85	□□□□□ -1.47
CUE5	YOR042W	YGR035C	P53222	116 aa		5.85	□□□□□ -1.47
CUE5	YOR042W	RPT4	P53549	437 aa	Known RBP	5.85	□□□□□ -1.47
CUE5	YOR042W	CDC55	Q00362	526 aa		5.85	□□□□□ -1.47
CUE5	YOR042W	RSC4	Q02206	625 aa		5.85	□□□□□ -1.47
CUE5	YOR042W	UBX2	Q04228	584 aa		5.85	□□□□□ -1.47
CUE5	YOR042W	HPF1	Q05164	967 aa		5.85	□□□□□ -1.47
CUE5	YOR042W	GPI13	Q07830	1017 aa		5.85	□□□□□ -1.47
CUE5	YOR042W	WHI5	Q12416	295 aa		5.85	□□□□□ -1.47
CUE5	YOR042W	RAD50	P12753	1312 aa		5.84	□□□□□ -1.47
CUE5	YOR042W	KRE2	P27809	442 aa		5.84	□□□□□ -1.47
CUE5	YOR042W	YGL242C	P53066	181 aa		5.84	□□□□□ -1.47
CUE5	YOR042W	MLC1	P53141	149 aa		5.84	□□□□□ -1.47
CUE5	YOR042W	YNL193W	P53870	558 aa		5.84	□□□□□ -1.47
CUE5	YOR042W	TY1A-DR2	Q03964	440 aa	Known RBP	5.84	□□□□□ -1.47
CUE5	YOR042W	RPN7	Q06103	429 aa	Known RBP	5.84	□□□□□ -1.47
CUE5	YOR042W	IDI1	P15496	288 aa		5.83	□□□□□ -1.48
CUE5	YOR042W	RET1	P22276	1149 aa	Known RBP	5.83	□□□□□ -1.48
CUE5	YOR042W	ICL1	P28240	557 aa	Predicted RBP	5.83	□□□□□ -1.48
CUE5	YOR042W	MET4	P32389	672 aa		5.83	□□□□□ -1.48
CUE5	YOR042W	BSC2	Q05611	235 aa		5.83	□□□□□ -1.48
CUE5	YOR042W	RSC2	Q06488	889 aa		5.83	□□□□□ -1.48
CUE5	YOR042W	TOP1	P04786	769 aa		5.82	□□□□□ -1.48
CUE5	YOR042W	PIF1	P07271	859 aa		5.82	□□□□□ -1.48
CUE5	YOR042W	YKU70	P32807	602 aa		5.82	□□□□□ -1.48
CUE5	YOR042W	NUG1	P40010	520 aa	Known RBP	5.82	□□□□□ -1.48
CUE5	YOR042W	SAM37	P50110	327 aa		5.82	□□□□□ -1.48
CUE5	YOR042W	ALO1	P54783	526 aa	Known RBP	5.82	□□□□□ -1.48
CUE5	YOR042W	IRC4	Q03036	179 aa		5.82	□□□□□ -1.48
CUE5	YOR042W	RRI2	Q12348	645 aa		5.82	□□□□□ -1.48
CUE5	YOR042W	FLO1	P32768	1537 aa		5.82	□□□□□ -1.48
CUE5	YOR042W	LCB1	P25045	558 aa	Known RBP	5.81	□□□□□ -1.48
CUE5	YOR042W	PRK1	P40494	810 aa		5.81	□□□□□ -1.48
CUE5	YOR042W	JJJ3	P47138	172 aa		5.81	□□□□□ -1.48
CUE5	YOR042W	PPT1	P53043	513 aa		5.81	□□□□□ -1.48
CUE5	YOR042W	MRPS35	P53292	345 aa		5.81	□□□□□ -1.48
CUE5	YOR042W	SQS1	P53866	767 aa	Known RBP	5.81	□□□□□ -1.48
CUE5	YOR042W	YPL062W	Q02781	134 aa		5.81	□□□□□ -1.48
CUE5	YOR042W	RMD1	Q03441	430 aa		5.81	□□□□□ -1.48
CUE5	YOR042W	BRE1	Q07457	700 aa	Known RBP	5.81	□□□□□ -1.48
CUE5	YOR042W	RPS9B	P05755	195 aa	Known RBP	5.8	□□□□□ -1.48
CUE5	YOR042W	GCD6	P32501	712 aa	Known RBP	5.8	□□□□□ -1.48
CUE5	YOR042W	ECM2	P38241	364 aa	Known RBP	5.8	□□□□□ -1.48
CUE5	YOR042W	SHC1	P39000	512 aa		5.8	□□□□□ -1.48
CUE5	YOR042W	YIR042C	P40586	236 aa		5.8	□□□□□ -1.48
CUE5	YOR042W	TOS4	Q06266	489 aa		5.8	□□□□□ -1.48
CUE5	YOR042W	NOC3	Q07896	663 aa	Predicted RBP	5.8	□□□□□ -1.48
CUE5	YOR042W	FLO11	P08640	1367 aa		5.8	□□□□□ -1.48
CUE5	YOR042W	PHO4	P07270	312 aa	Known RBP	5.79	□□□□□ -1.48
CUE5	YOR042W	RPT3	P33298	428 aa	Known RBP	5.79	□□□□□ -1.48
CUE5	YOR042W	BRN1	P38170	754 aa		5.79	□□□□□ -1.48
CUE5	YOR042W	YHL008C	P38750	627 aa		5.79	□□□□□ -1.48
CUE5	YOR042W	PIB2	P53191	635 aa		5.79	□□□□□ -1.48
CUE5	YOR042W	INM2	Q05533	292 aa		5.79	□□□□□ -1.48
CUE5	YOR042W	GAS5	Q08193	484 aa		5.79	□□□□□ -1.48
CUE5	YOR042W	GPM1	P00950	247 aa	Known RBP	5.78	□□□□□ -1.48
CUE5	YOR042W	VAS1	P07806	1104 aa	Known RBP	5.78	□□□□□ -1.48
CUE5	YOR042W	PDC5	P16467	563 aa	Known RBP	5.78	□□□□□ -1.48
CUE5	YOR042W	PYC2	P32327	1180 aa	Known RBP	5.78	□□□□□ -1.48
CUE5	YOR042W	KNS1	P32350	737 aa	Predicted RBP	5.78	□□□□□ -1.48
CUE5	YOR042W	ASF1	P32447	279 aa		5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms