RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	PRC1	P00729	532 aa		3.63	□□□□□ -1.83
SKP2	YNL311C	SNF1	P06782	633 aa	Known RBP	3.63	□□□□□ -1.83
SKP2	YNL311C	SAM1	P10659	382 aa	Known RBP	3.63	□□□□□ -1.83
SKP2	YNL311C	PTC3	P34221	468 aa	Known RBP	3.63	□□□□□ -1.83
SKP2	YNL311C	HDA1	P53973	706 aa		3.63	□□□□□ -1.83
SKP2	YNL311C	CUS1	Q02554	436 aa	Predicted RBP	3.63	□□□□□ -1.83
SKP2	YNL311C	NSE1	Q07913	336 aa		3.63	□□□□□ -1.83
SKP2	YNL311C	MEX67	Q99257	599 aa	Known RBP	3.63	□□□□□ -1.83
SKP2	YNL311C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.62	□□□□□ -1.83	not detected
SKP2	YNL311C	YKL097C	P34245	136 aa		3.62	□□□□□ -1.83
SKP2	YNL311C	MRPL7	P36519	292 aa		3.62	□□□□□ -1.83
SKP2	YNL311C	APM2	P38700	605 aa		3.62	□□□□□ -1.83
SKP2	YNL311C	YPT35	P38815	214 aa	Known RBP	3.62	□□□□□ -1.83
SKP2	YNL311C	YFL052W	P43551	465 aa		3.62	□□□□□ -1.83
SKP2	YNL311C	PNG1	Q02890	363 aa		3.62	□□□□□ -1.83
SKP2	YNL311C	DUS3	Q06053	668 aa	Known RBP	3.62	□□□□□ -1.83
SKP2	YNL311C	HIS5	P07172	385 aa		3.61	□□□□□ -1.83
SKP2	YNL311C	CHL1	P22516	861 aa	Predicted RBP	3.61	□□□□□ -1.83
SKP2	YNL311C	CDC48	P25694	835 aa	Known RBP	3.61	□□□□□ -1.83
SKP2	YNL311C	SLA1	P32790	1244 aa		3.61	□□□□□ -1.83
SKP2	YNL311C	REG2	P38232	338 aa		3.61	□□□□□ -1.83
SKP2	YNL311C	YER158C	P40095	573 aa		3.61	□□□□□ -1.83
SKP2	YNL311C	INP51	P40559	946 aa	Known RBP	3.61	□□□□□ -1.83
SKP2	YNL311C	LSB6	P42951	607 aa		3.61	□□□□□ -1.83
SKP2	YNL311C	SRT1	Q03175	343 aa		3.61	□□□□□ -1.83
SKP2	YNL311C	MNL2	Q12205	849 aa		3.61	□□□□□ -1.83
SKP2	YNL311C	PCK1	P10963	549 aa		3.61	□□□□□ -1.83
SKP2	YNL311C	SEC18	P18759	758 aa	Known RBP	3.61	□□□□□ -1.83
SKP2	YNL311C	EDS1	P38073	919 aa		3.61	□□□□□ -1.83
SKP2	YNL311C	TMA64	Q04600	565 aa	Known RBP	3.61	□□□□□ -1.83
SKP2	YNL311C	SHP1	P34223	423 aa		3.6	□□□□□ -1.83
SKP2	YNL311C	PRE3	P38624	215 aa		3.6	□□□□□ -1.83
SKP2	YNL311C	HXT10	P43581	546 aa		3.6	□□□□□ -1.83
SKP2	YNL311C	BCK2	P33306	851 aa		3.6	□□□□□ -1.83
SKP2	YNL311C	CCC2	P38995	1004 aa		3.6	□□□□□ -1.83
SKP2	YNL311C	POL32	P47110	350 aa		3.6	□□□□□ -1.83
SKP2	YNL311C	NOP8	Q08287	484 aa	Predicted RBP	3.6	□□□□□ -1.83
SKP2	YNL311C	YLL058W	Q12198	575 aa		3.6	□□□□□ -1.83
SKP2	YNL311C	MSS51	P32335	436 aa		3.59	□□□□□ -1.83
SKP2	YNL311C	PML39	Q03760	334 aa		3.59	□□□□□ -1.83
SKP2	YNL311C	RAM1	P22007	431 aa		3.59	□□□□□ -1.84
SKP2	YNL311C	RME1	P32338	300 aa	Known RBP	3.59	□□□□□ -1.84
SKP2	YNL311C	SSF1	P38789	453 aa	Predicted RBP	3.59	□□□□□ -1.84
SKP2	YNL311C	RSM26	P47141	266 aa		3.59	□□□□□ -1.84
SKP2	YNL311C	WHI4	Q07655	649 aa	Known RBP	3.59	□□□□□ -1.84
SKP2	YNL311C	YRR1	Q12172	810 aa		3.59	□□□□□ -1.84
SKP2	YNL311C	FUS1	P11710	512 aa		3.58	□□□□□ -1.84
SKP2	YNL311C	HMG2	P12684	1045 aa		3.58	□□□□□ -1.84
SKP2	YNL311C	PSE1	P32337	1089 aa	Known RBP	3.58	□□□□□ -1.84
SKP2	YNL311C	ECM32	P32644	1121 aa	Known RBP	3.58	□□□□□ -1.84
SKP2	YNL311C	COY1	P34237	679 aa		3.58	□□□□□ -1.84
SKP2	YNL311C	GRX7	P38068	203 aa		3.58	□□□□□ -1.84
SKP2	YNL311C	RFS1	P38234	210 aa	Known RBP	3.58	□□□□□ -1.84
SKP2	YNL311C	BOI2	P39969	1040 aa		3.58	□□□□□ -1.84
SKP2	YNL311C	BFA1	P47113	574 aa		3.58	□□□□□ -1.84
SKP2	YNL311C	NIS1	P53939	407 aa		3.58	□□□□□ -1.84
SKP2	YNL311C	VIP1	Q06685	1146 aa	Known RBP	3.58	□□□□□ -1.84
SKP2	YNL311C	LEE1	Q02799	301 aa	Known RBP	3.58	□□□□□ -1.84
SKP2	YNL311C	ELP4	Q02884	456 aa	Known RBP	3.58	□□□□□ -1.84
SKP2	YNL311C	YLR257W	Q06146	321 aa	Known RBP	3.58	□□□□□ -1.84
SKP2	YNL311C	RIF1	P29539	1916 aa		3.57	□□□□□ -1.84
SKP2	YNL311C	ADK2	P26364	225 aa		3.57	□□□□□ -1.84
SKP2	YNL311C	SEC21	P32074	935 aa	Known RBP	3.57	□□□□□ -1.84
SKP2	YNL311C	ESL1	P40456	1118 aa		3.57	□□□□□ -1.84
SKP2	YNL311C	LSB3	P43603	459 aa	Known RBP	3.57	□□□□□ -1.84
SKP2	YNL311C	YNL193W	P53870	558 aa		3.57	□□□□□ -1.84
SKP2	YNL311C	YPR084W	Q06821	456 aa		3.57	□□□□□ -1.84
SKP2	YNL311C	RTT109	Q07794	436 aa		3.57	□□□□□ -1.84
SKP2	YNL311C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
SKP2	YNL311C	KIN82	P25341	720 aa		3.56	□□□□□ -1.84
SKP2	YNL311C	SEC20	P28791	383 aa		3.56	□□□□□ -1.84
SKP2	YNL311C	CHS3	P29465	1165 aa		3.56	□□□□□ -1.84
SKP2	YNL311C	DRE2	P36152	348 aa		3.56	□□□□□ -1.84
SKP2	YNL311C	YHR202W	P38887	602 aa		3.56	□□□□□ -1.84
SKP2	YNL311C	HMF1	P40037	129 aa	Known RBP	3.56	□□□□□ -1.84
SKP2	YNL311C	ZAP1	P47043	880 aa		3.56	□□□□□ -1.84
SKP2	YNL311C	RPS7B	P48164	190 aa	Known RBP	3.56	□□□□□ -1.84
SKP2	YNL311C	YNR061C	P53747	219 aa		3.56	□□□□□ -1.84
SKP2	YNL311C	SAM2	P19358	384 aa	Known RBP	3.56	□□□□□ -1.84
SKP2	YNL311C	SGF29	P25554	259 aa		3.56	□□□□□ -1.84
SKP2	YNL311C	RFC1	P38630	861 aa	Known RBP	3.56	□□□□□ -1.84
SKP2	YNL311C	GCV2	P49095	1034 aa		3.56	□□□□□ -1.84
SKP2	YNL311C	PTA1	Q01329	785 aa	Predicted RBP	3.56	□□□□□ -1.84
SKP2	YNL311C	RAD61	Q99359	647 aa		3.56	□□□□□ -1.84
SKP2	YNL311C	RTS1	P38903	757 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	TAM41	P53230	385 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	MDR1	P53258	950 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	YGR130C	P53278	816 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	AI4	P03878	556 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	SWC3	P31376	625 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	BIO2	P32451	375 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	RAD24	P32641	659 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	LIF1	P53150	421 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	YGR266W	P53326	701 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	SFB2	P53953	876 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	NSE5	Q03718	556 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	GCN1	P33892	2672 aa	Known RBP	3.55	□□□□□ -1.84
SKP2	YNL311C	CCH1	P50077	2039 aa		3.55	□□□□□ -1.84
SKP2	YNL311C	VPS45	P38932	577 aa		3.54	□□□□□ -1.84
SKP2	YNL311C	HGH1	P48362	394 aa	Known RBP	3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms