RNA–Protein interactions for RNA: YNL272C

SEC2, Transcript of Guanyl-nucleotide exchange factor for the small G-protein Sec4p, yeast

Gene SEC2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC2	YNL272C	SYT1	Q06836	1226 aa		4.89	□□□□□ -1.63
SEC2	YNL272C	SSK22	P25390	1331 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC2	YNL272C	SYF1	Q04048	859 aa	Predicted RBP	4.89	□□□□□ -1.63
SEC2	YNL272C	YDR461C-A	Q2V2P7	80 aa		4.89	□□□□□ -1.63
SEC2	YNL272C	SUP35	P05453	685 aa	Known RBP	4.88	□□□□□ -1.63
SEC2	YNL272C	PHO4	P07270	312 aa	Known RBP	4.88	□□□□□ -1.63
SEC2	YNL272C	IDI1	P15496	288 aa		4.88	□□□□□ -1.63
SEC2	YNL272C	NCL1	P38205	684 aa	Known RBP	4.88	□□□□□ -1.63
SEC2	YNL272C	CTR9	P89105	1077 aa		4.88	□□□□□ -1.63
SEC2	YNL272C	UBP16	Q02863	499 aa		4.88	□□□□□ -1.63
SEC2	YNL272C	MTC5	Q03897	1148 aa		4.88	□□□□□ -1.63
SEC2	YNL272C	FPS1	P23900	669 aa		4.88	□□□□□ -1.63
SEC2	YNL272C	AIM46	P38885	310 aa		4.88	□□□□□ -1.63
SEC2	YNL272C	YER156C	P40093	338 aa	Known RBP	4.88	□□□□□ -1.63
SEC2	YNL272C	ERO1	Q03103	563 aa		4.88	□□□□□ -1.63
SEC2	YNL272C	SNU66	Q12420	587 aa	Predicted RBP	4.88	□□□□□ -1.63
SEC2	YNL272C	GCD7	P32502	381 aa	Predicted RBP	4.87	□□□□□ -1.63
SEC2	YNL272C	CEM1	P39525	442 aa		4.87	□□□□□ -1.63
SEC2	YNL272C	LYS5	P50113	272 aa		4.87	□□□□□ -1.63
SEC2	YNL272C	TY1A-DR2	Q03964	440 aa	Known RBP	4.87	□□□□□ -1.63
SEC2	YNL272C	MRP10	O75012	95 aa		4.86	□□□□□ -1.63
SEC2	YNL272C	ICL1	P28240	557 aa	Predicted RBP	4.86	□□□□□ -1.63
SEC2	YNL272C	NMD2	P38798	1089 aa	Known RBP	4.86	□□□□□ -1.63
SEC2	YNL272C	BSC2	Q05611	235 aa		4.86	□□□□□ -1.63
SEC2	YNL272C	TOP1	P04786	769 aa		4.86	□□□□□ -1.63
SEC2	YNL272C	DAK2	P43550	591 aa		4.86	□□□□□ -1.63
SEC2	YNL272C	SAC3	P46674	1301 aa		4.86	□□□□□ -1.63
SEC2	YNL272C	TOS4	Q06266	489 aa		4.86	□□□□□ -1.63
SEC2	YNL272C	THI3	Q07471	609 aa		4.86	□□□□□ -1.63
SEC2	YNL272C	DPH6	Q12429	685 aa		4.86	□□□□□ -1.63
SEC2	YNL272C	MGM1	P32266	881 aa		4.85	□□□□□ -1.63
SEC2	YNL272C	ICP55	P40051	511 aa		4.85	□□□□□ -1.63
SEC2	YNL272C	HPF1	Q05164	967 aa		4.85	□□□□□ -1.63
SEC2	YNL272C	RET1	P22276	1149 aa	Known RBP	4.85	□□□□□ -1.63
SEC2	YNL272C	YKU70	P32807	602 aa		4.85	□□□□□ -1.63
SEC2	YNL272C	PRK1	P40494	810 aa		4.85	□□□□□ -1.63
SEC2	YNL272C	PPT1	P53043	513 aa		4.85	□□□□□ -1.63
SEC2	YNL272C	UTP10	P42945	1769 aa	Known RBP	4.85	□□□□□ -1.63
SEC2	YNL272C	RPP1A	P05318	106 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC2	YNL272C	SEC18	P18759	758 aa	Known RBP	4.84	□□□□□ -1.63
SEC2	YNL272C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
SEC2	YNL272C	KRE2	P27809	442 aa		4.84	□□□□□ -1.63
SEC2	YNL272C	PYC2	P32327	1180 aa	Known RBP	4.84	□□□□□ -1.63
SEC2	YNL272C	DUR3	P33413	735 aa		4.84	□□□□□ -1.63
SEC2	YNL272C	RFC1	P38630	861 aa	Known RBP	4.84	□□□□□ -1.63
SEC2	YNL272C	SPL2	P38839	148 aa		4.84	□□□□□ -1.63
SEC2	YNL272C	RPT4	P53549	437 aa	Known RBP	4.84	□□□□□ -1.63
SEC2	YNL272C	SQS1	P53866	767 aa	Known RBP	4.84	□□□□□ -1.63
SEC2	YNL272C	HEH2	Q03281	663 aa		4.84	□□□□□ -1.63
SEC2	YNL272C	NCB2	Q92317	146 aa		4.84	□□□□□ -1.63
SEC2	YNL272C	GRX6	Q12438	231 aa		4.84	□□□□□ -1.64
SEC2	YNL272C	RPT1	P33299	467 aa	Known RBP	4.83	□□□□□ -1.64
SEC2	YNL272C	JJJ3	P47138	172 aa		4.83	□□□□□ -1.64
SEC2	YNL272C	GSM1	P42950	618 aa		4.83	□□□□□ -1.64
SEC2	YNL272C	YNL193W	P53870	558 aa		4.83	□□□□□ -1.64
SEC2	YNL272C	NOC3	Q07896	663 aa	Predicted RBP	4.83	□□□□□ -1.64
SEC2	YNL272C	RRI2	Q12348	645 aa		4.83	□□□□□ -1.64
SEC2	YNL272C	ADR1	P07248	1323 aa		4.82	□□□□□ -1.64
SEC2	YNL272C	YGL242C	P53066	181 aa		4.82	□□□□□ -1.64
SEC2	YNL272C	IRC4	Q03036	179 aa		4.82	□□□□□ -1.64
SEC2	YNL272C	RMD1	Q03441	430 aa		4.82	□□□□□ -1.64
SEC2	YNL272C	RPN7	Q06103	429 aa	Known RBP	4.82	□□□□□ -1.64
SEC2	YNL272C	NKP2	Q06162	153 aa		4.82	□□□□□ -1.64
SEC2	YNL272C	FLP1	P03870	423 aa		4.81	□□□□□ -1.64
SEC2	YNL272C	NOT3	P06102	836 aa	Known RBP	4.81	□□□□□ -1.64
SEC2	YNL272C	LCB1	P25045	558 aa	Known RBP	4.81	□□□□□ -1.64
SEC2	YNL272C	TFA2	P36145	328 aa		4.81	□□□□□ -1.64
SEC2	YNL272C	KTR3	P38130	404 aa	Predicted RBP	4.81	□□□□□ -1.64
SEC2	YNL272C	YHL008C	P38750	627 aa		4.81	□□□□□ -1.64
SEC2	YNL272C	YJR107W	P47145	328 aa		4.81	□□□□□ -1.64
SEC2	YNL272C	SAM37	P50110	327 aa		4.81	□□□□□ -1.64
SEC2	YNL272C	GAS5	Q08193	484 aa		4.81	□□□□□ -1.64
SEC2	YNL272C	PMD1	P32634	1753 aa		4.81	□□□□□ -1.64
SEC2	YNL272C	PDR18	P53756	1333 aa		4.81	□□□□□ -1.64
SEC2	YNL272C	GPM1	P00950	247 aa	Known RBP	4.81	□□□□□ -1.64
SEC2	YNL272C	SHC1	P39000	512 aa		4.81	□□□□□ -1.64
SEC2	YNL272C	NUG1	P40010	520 aa	Known RBP	4.81	□□□□□ -1.64
SEC2	YNL272C	FYV10	P40492	516 aa		4.81	□□□□□ -1.64
SEC2	YNL272C	ALO1	P54783	526 aa	Known RBP	4.81	□□□□□ -1.64
SEC2	YNL272C	POM152	P39685	1337 aa		4.81	□□□□□ -1.64
SEC2	YNL272C	FUS1	P11710	512 aa		4.8	□□□□□ -1.64
SEC2	YNL272C	PDC5	P16467	563 aa	Known RBP	4.8	□□□□□ -1.64
SEC2	YNL272C	GCD6	P32501	712 aa	Known RBP	4.8	□□□□□ -1.64
SEC2	YNL272C	RPT3	P33298	428 aa	Known RBP	4.8	□□□□□ -1.64
SEC2	YNL272C	ECM21	P38167	1117 aa	Known RBP	4.8	□□□□□ -1.64
SEC2	YNL272C	INP51	P40559	946 aa	Known RBP	4.8	□□□□□ -1.64
SEC2	YNL272C	YIR042C	P40586	236 aa		4.8	□□□□□ -1.64
SEC2	YNL272C	SEC8	P32855	1065 aa		4.8	□□□□□ -1.64
SEC2	YNL272C	VPS35	P34110	944 aa		4.8	□□□□□ -1.64
SEC2	YNL272C	MLC1	P53141	149 aa		4.8	□□□□□ -1.64
SEC2	YNL272C	UBX2	Q04228	584 aa		4.8	□□□□□ -1.64
SEC2	YNL272C	CDC16	P09798	840 aa		4.79	□□□□□ -1.64
SEC2	YNL272C	MCM2	P29469	868 aa		4.79	□□□□□ -1.64
SEC2	YNL272C	ASF1	P32447	279 aa		4.79	□□□□□ -1.64
SEC2	YNL272C	AFG2	P32794	780 aa		4.79	□□□□□ -1.64
SEC2	YNL272C	UGA4	P32837	571 aa		4.79	□□□□□ -1.64
SEC2	YNL272C	CIC1	P38779	376 aa	Known RBP	4.79	□□□□□ -1.64
SEC2	YNL272C	PIB2	P53191	635 aa		4.79	□□□□□ -1.64
SEC2	YNL272C	YGR035C	P53222	116 aa		4.79	□□□□□ -1.64
SEC2	YNL272C	ECM16	Q04217	1267 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms