RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeast

Gene SWS2, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWS2	YNL081C	CNN1	P43618	361 aa		4.72	□□□□□ -1.65
SWS2	YNL081C	PRP43	P53131	767 aa	Known RBP	4.72	□□□□□ -1.65
SWS2	YNL081C	HXT17	P53631	564 aa		4.72	□□□□□ -1.65
SWS2	YNL081C	HXT15	P54854	567 aa		4.72	□□□□□ -1.65
SWS2	YNL081C	RAT1	Q02792	1006 aa	Known RBP	4.72	□□□□□ -1.65
SWS2	YNL081C	RSC58	Q07979	502 aa		4.72	□□□□□ -1.65
SWS2	YNL081C	SPO21	Q12411	609 aa		4.72	□□□□□ -1.65
SWS2	YNL081C	DBP5	P20449	482 aa	Known RBP	4.71	□□□□□ -1.66
SWS2	YNL081C	SEG2	P34250	1132 aa		4.71	□□□□□ -1.66
SWS2	YNL081C	PIK1	P39104	1066 aa		4.71	□□□□□ -1.66
SWS2	YNL081C	GNP1	P48813	663 aa		4.71	□□□□□ -1.66
SWS2	YNL081C	SVF1	Q05515	481 aa		4.71	□□□□□ -1.66
SWS2	YNL081C	SPS1	P08458	490 aa		4.7	□□□□□ -1.66
SWS2	YNL081C	BAP2	P38084	609 aa		4.7	□□□□□ -1.66
SWS2	YNL081C	GPB2	P39717	880 aa		4.7	□□□□□ -1.66
SWS2	YNL081C	HNT2	P49775	206 aa		4.7	□□□□□ -1.66
SWS2	YNL081C	MLS1	P30952	554 aa		4.69	□□□□□ -1.66
SWS2	YNL081C	RER2	P35196	286 aa		4.69	□□□□□ -1.66
SWS2	YNL081C	UBP5	P39944	805 aa		4.69	□□□□□ -1.66
SWS2	YNL081C	CDC34	P14682	295 aa		4.68	□□□□□ -1.66
SWS2	YNL081C	CLN2	P20438	545 aa		4.68	□□□□□ -1.66
SWS2	YNL081C	GAS1	P22146	559 aa	Known RBP	4.68	□□□□□ -1.66
SWS2	YNL081C	SEC26	P41810	973 aa	Known RBP	4.68	□□□□□ -1.66
SWS2	YNL081C	KRI1	P42846	591 aa	Known RBP	4.68	□□□□□ -1.66
SWS2	YNL081C	YOR352W	Q08816	343 aa		4.68	□□□□□ -1.66
SWS2	YNL081C	RNQ1	P25367	405 aa		4.67	□□□□□ -1.66
SWS2	YNL081C	SNF7	P39929	240 aa	Known RBP	4.67	□□□□□ -1.66
SWS2	YNL081C	SNO2	P53823	222 aa		4.67	□□□□□ -1.66
SWS2	YNL081C	MRPL22	P53881	309 aa		4.67	□□□□□ -1.66
SWS2	YNL081C	TIF35	Q04067	274 aa	Known RBP	4.67	□□□□□ -1.66
SWS2	YNL081C	SNF5	P18480	905 aa		4.66	□□□□□ -1.66
SWS2	YNL081C	LYP1	P32487	611 aa		4.66	□□□□□ -1.66
SWS2	YNL081C	MCM7	P38132	845 aa		4.66	□□□□□ -1.66
SWS2	YNL081C	ETP1	P38748	585 aa	Known RBP	4.66	□□□□□ -1.66
SWS2	YNL081C	MET10	P39692	1035 aa		4.66	□□□□□ -1.66
SWS2	YNL081C	MPH1	P40562	993 aa		4.66	□□□□□ -1.66
SWS2	YNL081C	TYW3	P53177	273 aa		4.66	□□□□□ -1.66
SWS2	YNL081C	SNU71	P53207	620 aa	Known RBP	4.66	□□□□□ -1.66
SWS2	YNL081C	RCL1	Q08096	367 aa	Predicted RBP	4.66	□□□□□ -1.66
SWS2	YNL081C	GNT1	Q12096	491 aa		4.66	□□□□□ -1.66
SWS2	YNL081C	THS1	P04801	734 aa	Known RBP	4.65	□□□□□ -1.67
SWS2	YNL081C	YER152C	P10356	443 aa		4.65	□□□□□ -1.67
SWS2	YNL081C	MAD1	P40957	749 aa		4.65	□□□□□ -1.67
SWS2	YNL081C	SPO20	Q04359	397 aa		4.65	□□□□□ -1.67
SWS2	YNL081C	RFC5	P38251	354 aa		4.64	□□□□□ -1.67
SWS2	YNL081C	GEM1	P39722	662 aa		4.64	□□□□□ -1.67
SWS2	YNL081C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
SWS2	YNL081C	RSM24	Q03976	319 aa		4.64	□□□□□ -1.67
SWS2	YNL081C	RKM4	Q12504	494 aa		4.64	□□□□□ -1.67
SWS2	YNL081C	TRP2	P00899	507 aa	Known RBP	4.63	□□□□□ -1.67
SWS2	YNL081C	KIN2	P13186	1147 aa	Known RBP	4.63	□□□□□ -1.67
SWS2	YNL081C	DUT1	P33317	147 aa		4.63	□□□□□ -1.67
SWS2	YNL081C	TSA1	P34760	196 aa	Known RBP	4.63	□□□□□ -1.67
SWS2	YNL081C	YGR053C	P53234	283 aa		4.63	□□□□□ -1.67
SWS2	YNL081C	CWC24	P53769	259 aa		4.63	□□□□□ -1.67
SWS2	YNL081C	SPP382	Q06411	708 aa	Predicted RBP	4.63	□□□□□ -1.67
SWS2	YNL081C	CDA2	Q06703	312 aa		4.63	□□□□□ -1.67
SWS2	YNL081C	PRP6	P19735	899 aa	Predicted RBP	4.62	□□□□□ -1.67
SWS2	YNL081C	BAS1	P22035	811 aa		4.62	□□□□□ -1.67
SWS2	YNL081C	RIM8	P53179	542 aa		4.62	□□□□□ -1.67
SWS2	YNL081C	EEB1	Q02891	456 aa		4.62	□□□□□ -1.67
SWS2	YNL081C	ATG13	Q06628	738 aa		4.62	□□□□□ -1.67
SWS2	YNL081C	ACM1	Q08981	209 aa		4.62	□□□□□ -1.67
SWS2	YNL081C	YDL177C	Q12257	170 aa		4.62	□□□□□ -1.67
SWS2	YNL081C	RPL11A	P0C0W9	174 aa	Known RBP	4.61	□□□□□ -1.67
SWS2	YNL081C	INO1	P11986	533 aa		4.61	□□□□□ -1.67
SWS2	YNL081C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SWS2	YNL081C	GDE1	Q02979	1223 aa		4.61	□□□□□ -1.67
SWS2	YNL081C	SGD1	Q06132	899 aa		4.61	□□□□□ -1.67
SWS2	YNL081C	JIP5	Q06214	492 aa	Predicted RBP	4.61	□□□□□ -1.67
SWS2	YNL081C	SVS1	Q12254	260 aa		4.61	□□□□□ -1.67
SWS2	YNL081C	RPL11B	Q3E757	174 aa	Predicted RBP	4.61	□□□□□ -1.67
SWS2	YNL081C	SOD2	P00447	233 aa		4.6	□□□□□ -1.67
SWS2	YNL081C	YKL107W	P34251	309 aa		4.6	□□□□□ -1.67
SWS2	YNL081C	UGA2	P38067	497 aa		4.6	□□□□□ -1.67
SWS2	YNL081C	AIM3	P38266	947 aa	Known RBP	4.6	□□□□□ -1.67
SWS2	YNL081C	MXR1	P40029	184 aa		4.6	□□□□□ -1.67
SWS2	YNL081C	RRT14	P40470	206 aa		4.6	□□□□□ -1.67
SWS2	YNL081C	PIN2	Q12057	282 aa		4.6	□□□□□ -1.67
SWS2	YNL081C	CYC1	P00044	109 aa	Predicted RBP	4.59	□□□□□ -1.67
SWS2	YNL081C	APL1	P27351	700 aa		4.59	□□□□□ -1.67
SWS2	YNL081C	LAM1	P38851	1228 aa		4.59	□□□□□ -1.67
SWS2	YNL081C	PNT1	P38969	423 aa		4.59	□□□□□ -1.67
SWS2	YNL081C	YGL176C	P46945	554 aa		4.59	□□□□□ -1.67
SWS2	YNL081C	VPS16	Q03308	798 aa		4.59	□□□□□ -1.67
SWS2	YNL081C	RPS13	P05756	151 aa	Known RBP	4.58	□□□□□ -1.68
SWS2	YNL081C	MOT2	P34909	587 aa	Known RBP	4.58	□□□□□ -1.68
SWS2	YNL081C	YFL054C	P43549	646 aa		4.58	□□□□□ -1.68
SWS2	YNL081C	FAA4	P47912	694 aa	Known RBP	4.58	□□□□□ -1.68
SWS2	YNL081C	PBP1	P53297	722 aa	Known RBP	4.58	□□□□□ -1.68
SWS2	YNL081C	YLR225C	Q05948	407 aa	Known RBP	4.58	□□□□□ -1.68
SWS2	YNL081C	YPL277C	Q08989	487 aa		4.58	□□□□□ -1.68
SWS2	YNL081C	DBP2	P24783	546 aa	Known RBP	4.57	□□□□□ -1.68
SWS2	YNL081C	THI80	P35202	319 aa		4.57	□□□□□ -1.68
SWS2	YNL081C	ABZ1	P37254	787 aa	Predicted RBP	4.57	□□□□□ -1.68
SWS2	YNL081C	MEF2	P39677	819 aa		4.57	□□□□□ -1.68
SWS2	YNL081C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
SWS2	YNL081C	FAL1	Q12099	399 aa	Known RBP	4.57	□□□□□ -1.68
SWS2	YNL081C	YLR358C	O13565	187 aa		4.56	□□□□□ -1.68
SWS2	YNL081C	CMP2	P14747	604 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms