RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W CEX1Q12453 761 aa5.2□□□□□ -1.58
CBF5YLR175W AIM44Q99299 758 aa5.2□□□□□ -1.58
CBF5YLR175W TY1A-DR4O74302 440 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-HP0C2I4 478 aaKnown RBP5.19□□□□□ -1.58
CBF5YLR175W TY1A-AP0CX57 440 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-PR1P0CX58 440 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-ORP0CX59 440 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-PR2P0CX60 440 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-DR5P0CX65 440 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-ER2P0CX66 440 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-GR3P0CX67 440 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-LR1P0CX68 440 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-MR2P0CX69 440 aa5.19□□□□□ -1.58
CBF5YLR175W RFC5P38251 354 aa5.19□□□□□ -1.58
CBF5YLR175W RPN10P38886 268 aaKnown RBP5.19□□□□□ -1.58
CBF5YLR175W YIL089WP40500 205 aa5.19□□□□□ -1.58
CBF5YLR175W EPL1P43572 832 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-JR2P47099 440 aa5.19□□□□□ -1.58
CBF5YLR175W RPL34AP87262 121 aaPredicted RBP5.19□□□□□ -1.58
CBF5YLR175W MDM1Q01846 1127 aa5.19□□□□□ -1.58
CBF5YLR175W YML020WQ03722 664 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-DR1Q03856 440 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-ML1Q04706 440 aaKnown RBP5.19□□□□□ -1.58
CBF5YLR175W YDR341CQ05506 607 aaKnown RBP5.19□□□□□ -1.58
CBF5YLR175W YDR344CQ05510 147 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-BRQ12217 440 aa5.19□□□□□ -1.58
CBF5YLR175W MCM16Q12262 181 aa5.19□□□□□ -1.58
CBF5YLR175W YDL206WQ12424 762 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-NL2Q12470 440 aa5.19□□□□□ -1.58
CBF5YLR175W TY1A-GR2Q12485 440 aa5.19□□□□□ -1.58
CBF5YLR175W CDC6P09119 513 aa5.18□□□□□ -1.58
CBF5YLR175W ACE2P21192 770 aa5.18□□□□□ -1.58
CBF5YLR175W MBR1P23493 339 aa5.18□□□□□ -1.58
CBF5YLR175W ROX1P25042 368 aa5.18□□□□□ -1.58
CBF5YLR175W PUP1P25043 261 aa5.18□□□□□ -1.58
CBF5YLR175W VPS45P38932 577 aa5.18□□□□□ -1.58
CBF5YLR175W CCT3P39077 534 aaKnown RBP5.18□□□□□ -1.58
CBF5YLR175W SNF7P39929 240 aaKnown RBP5.18□□□□□ -1.58
CBF5YLR175W PCI8P40512 444 aa5.18□□□□□ -1.58
CBF5YLR175W CIR1P42940 261 aa5.18□□□□□ -1.58
CBF5YLR175W YGL138CP53122 345 aa5.18□□□□□ -1.58
CBF5YLR175W COG8Q04632 607 aa5.18□□□□□ -1.58
CBF5YLR175W YPR097WQ06839 1073 aa5.18□□□□□ -1.58
CBF5YLR175W PEX19Q07418 342 aa5.18□□□□□ -1.58
CBF5YLR175W DCS2Q12123 353 aa5.18□□□□□ -1.58
CBF5YLR175W GIN4Q12263 1142 aa5.18□□□□□ -1.58
CBF5YLR175W AIR2Q12476 344 aaKnown RBP5.18□□□□□ -1.58
CBF5YLR175W MYO1P08964 1928 aa5.18□□□□□ -1.58
CBF5YLR175W HSP82P02829 709 aaKnown RBP5.17□□□□□ -1.58
CBF5YLR175W MET6P05694 767 aaKnown RBP5.17□□□□□ -1.58
CBF5YLR175W PRT1P06103 763 aaKnown RBP5.17□□□□□ -1.58
CBF5YLR175W HCA4P20448 770 aaKnown RBP5.17□□□□□ -1.58
CBF5YLR175W RDS1P25611 832 aa5.17□□□□□ -1.58
CBF5YLR175W PER1P25625 357 aa5.17□□□□□ -1.58
CBF5YLR175W OCT1P35999 772 aa5.17□□□□□ -1.58
CBF5YLR175W RFT1P38206 574 aaPredicted RBP5.17□□□□□ -1.58
CBF5YLR175W PTC2P39966 464 aaKnown RBP5.17□□□□□ -1.58
CBF5YLR175W ACA1P39970 489 aa5.17□□□□□ -1.58
CBF5YLR175W DJP1P40564 432 aa5.17□□□□□ -1.58
CBF5YLR175W ENT3P47160 408 aa5.17□□□□□ -1.58
CBF5YLR175W LSB1P53281 241 aa5.17□□□□□ -1.58
CBF5YLR175W RET3P53600 189 aa5.17□□□□□ -1.58
CBF5YLR175W ALR1Q08269 859 aa5.17□□□□□ -1.58
CBF5YLR175W GET3Q12154 354 aaKnown RBP5.17□□□□□ -1.58
CBF5YLR175W CIT1P00890 479 aa5.16□□□□□ -1.58
CBF5YLR175W SAM2P19358 384 aaKnown RBP5.16□□□□□ -1.58
CBF5YLR175W MCM3P24279 971 aaKnown RBP5.16□□□□□ -1.58
CBF5YLR175W PEP12P32854 288 aa5.16□□□□□ -1.58
CBF5YLR175W TGL4P36165 910 aa5.16□□□□□ -1.58
CBF5YLR175W TPM2P40414 161 aa5.16□□□□□ -1.58
CBF5YLR175W PIL1P53252 339 aaKnown RBP5.16□□□□□ -1.58
CBF5YLR175W KRE33P53914 1056 aaKnown RBP5.16□□□□□ -1.58
CBF5YLR175W YML082WQ04533 649 aaKnown RBP5.16□□□□□ -1.58
CBF5YLR175W ETT1Q08421 412 aaKnown RBP5.16□□□□□ -1.58
CBF5YLR175W RPL22AP05749 121 aaKnown RBP5.15□□□□□ -1.58
CBF5YLR175W KRS1P15180 591 aaKnown RBP5.15□□□□□ -1.58
CBF5YLR175W RPL8AP17076 256 aaKnown RBP5.15□□□□□ -1.58
CBF5YLR175W VPS1P21576 704 aaKnown RBP5.15□□□□□ -1.58
CBF5YLR175W PAT1P25644 796 aaKnown RBP5.15□□□□□ -1.58
CBF5YLR175W PNT1P38969 423 aa5.15□□□□□ -1.58
CBF5YLR175W VAB2P40003 282 aa5.15□□□□□ -1.58
CBF5YLR175W CCT5P40413 562 aaKnown RBP5.15□□□□□ -1.58
CBF5YLR175W RSM25P40496 264 aa5.15□□□□□ -1.58
CBF5YLR175W LYS14P40971 790 aa5.15□□□□□ -1.58
CBF5YLR175W NET1P47035 1189 aa5.15□□□□□ -1.58
CBF5YLR175W VIP1Q06685 1146 aaKnown RBP5.15□□□□□ -1.58
CBF5YLR175W TIP41Q12199 356 aa5.15□□□□□ -1.58
CBF5YLR175W DDP1Q99321 188 aaKnown RBP5.15□□□□□ -1.58
CBF5YLR175W HVG1P0CE11 249 aa5.14□□□□□ -1.59
CBF5YLR175W STI1P15705 589 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
CBF5YLR175W ALG1P16661 449 aa5.14□□□□□ -1.59
CBF5YLR175W RDS2P19541 446 aaKnown RBP5.14□□□□□ -1.59
CBF5YLR175W ISF1P32488 338 aa5.14□□□□□ -1.59
CBF5YLR175W ARL1P38116 183 aaKnown RBP5.14□□□□□ -1.59
CBF5YLR175W BSD2P38356 321 aa5.14□□□□□ -1.59
CBF5YLR175W YGL081WP53156 320 aa5.14□□□□□ -1.59
CBF5YLR175W YML037CQ03703 340 aa5.14□□□□□ -1.59
CBF5YLR175W UTP4Q06679 776 aaKnown RBP5.14□□□□□ -1.59
CBF5YLR175W YPR015CQ12531 247 aa5.14□□□□□ -1.59
CBF5YLR175W TOM1Q03280 3268 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms