RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C GCN5Q03330 439 aa5.54□□□□□ -1.52
NYV1YLR093C YOR352WQ08816 343 aa5.54□□□□□ -1.52
NYV1YLR093C DOM34P33309 386 aa5.53□□□□□ -1.52
NYV1YLR093C MEF2P39677 819 aa5.53□□□□□ -1.52
NYV1YLR093C RSB1Q08417 382 aa5.53□□□□□ -1.52
NYV1YLR093C SPO21Q12411 609 aa5.53□□□□□ -1.52
NYV1YLR093C CYC1P00044 109 aaPredicted RBP5.52□□□□□ -1.53
NYV1YLR093C DED1P06634 604 aaKnown RBP5.52□□□□□ -1.53
NYV1YLR093C PUF4P25339 888 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
NYV1YLR093C ABZ1P37254 787 aaPredicted RBP5.52□□□□□ -1.53
NYV1YLR093C RGD1P38339 666 aa5.52□□□□□ -1.53
NYV1YLR093C MRPS18P42847 217 aa5.52□□□□□ -1.53
NYV1YLR093C MKK2P32491 506 aa5.51□□□□□ -1.53
NYV1YLR093C TAT2P38967 592 aa5.51□□□□□ -1.53
NYV1YLR093C IPL1P38991 367 aa5.51□□□□□ -1.53
NYV1YLR093C GNP1P48813 663 aa5.51□□□□□ -1.53
NYV1YLR093C ROD1Q02805 837 aa5.51□□□□□ -1.53
NYV1YLR093C SEN54Q02825 467 aaPredicted RBP5.51□□□□□ -1.53
NYV1YLR093C SHM2P37291 469 aaKnown RBP5.5□□□□□ -1.53
NYV1YLR093C HXT13P39924 564 aa5.5□□□□□ -1.53
NYV1YLR093C SPT20P50875 604 aa5.5□□□□□ -1.53
NYV1YLR093C HXT17P53631 564 aa5.5□□□□□ -1.53
NYV1YLR093C HXT15P54854 567 aa5.5□□□□□ -1.53
NYV1YLR093C DUS4Q06063 367 aa5.5□□□□□ -1.53
NYV1YLR093C RAD2P07276 1031 aa5.49□□□□□ -1.53
NYV1YLR093C RAT1Q02792 1006 aaKnown RBP5.49□□□□□ -1.53
NYV1YLR093C CYC8P14922 966 aa5.48□□□□□ -1.53
NYV1YLR093C SEC8P32855 1065 aa5.48□□□□□ -1.53
NYV1YLR093C MPT5P39016 859 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
NYV1YLR093C RSM24Q03976 319 aa5.48□□□□□ -1.53
NYV1YLR093C RFC5P38251 354 aa5.47□□□□□ -1.53
NYV1YLR093C CNN1P43618 361 aa5.47□□□□□ -1.53
NYV1YLR093C PLB2Q03674 706 aa5.47□□□□□ -1.53
NYV1YLR093C SYP1P25623 870 aaKnown RBP5.46□□□□□ -1.54
NYV1YLR093C ATG13Q06628 738 aa5.46□□□□□ -1.54
NYV1YLR093C RIB2Q12362 591 aaKnown RBP5.46□□□□□ -1.54
NYV1YLR093C TUB2P02557 457 aaKnown RBP5.45□□□□□ -1.54
NYV1YLR093C GAL10P04397 699 aa5.45□□□□□ -1.54
NYV1YLR093C YER152CP10356 443 aa5.45□□□□□ -1.54
NYV1YLR093C DBP5P20449 482 aaKnown RBP5.45□□□□□ -1.54
NYV1YLR093C SRM1P21827 482 aa5.45□□□□□ -1.54
NYV1YLR093C SLD2P34252 453 aa5.45□□□□□ -1.54
NYV1YLR093C ROT1Q03691 256 aa5.45□□□□□ -1.54
NYV1YLR093C SIZ1Q04195 904 aa5.45□□□□□ -1.54
NYV1YLR093C CDC6P09119 513 aa5.44□□□□□ -1.54
NYV1YLR093C KIN2P13186 1147 aaKnown RBP5.44□□□□□ -1.54
NYV1YLR093C STE11P23561 717 aa5.44□□□□□ -1.54
NYV1YLR093C YFL054CP43549 646 aa5.44□□□□□ -1.54
NYV1YLR093C MRL1Q06815 381 aa5.44□□□□□ -1.54
NYV1YLR093C CDC20P26309 610 aa5.43□□□□□ -1.54
NYV1YLR093C MGE1P38523 228 aa5.43□□□□□ -1.54
NYV1YLR093C RPS26AP39938 119 aaKnown RBP5.43□□□□□ -1.54
NYV1YLR093C RPS26BP39939 119 aaKnown RBP5.43□□□□□ -1.54
NYV1YLR093C MPH1P40562 993 aa5.43□□□□□ -1.54
NYV1YLR093C YJR107WP47145 328 aa5.43□□□□□ -1.54
NYV1YLR093C PBP1P53297 722 aaKnown RBP5.43□□□□□ -1.54
NYV1YLR093C RXT3Q07458 294 aa5.43□□□□□ -1.54
NYV1YLR093C ACK1Q07622 623 aaPredicted RBP5.43□□□□□ -1.54
NYV1YLR093C SVS1Q12254 260 aa5.43□□□□□ -1.54
NYV1YLR093C GCR1P07261 785 aa5.42□□□□□ -1.54
NYV1YLR093C CMP2P14747 604 aa5.42□□□□□ -1.54
NYV1YLR093C MLS1P30952 554 aa5.42□□□□□ -1.54
NYV1YLR093C TRM2P33753 639 aa5.42□□□□□ -1.54
NYV1YLR093C GIS1Q03833 894 aa5.42□□□□□ -1.54
NYV1YLR093C GPB1Q08886 897 aa5.42□□□□□ -1.54
NYV1YLR093C VPS62P53285 467 aa5.41□□□□□ -1.54
NYV1YLR093C MNN10P50108 393 aaKnown RBP5.4□□□□□ -1.54
NYV1YLR093C GNT1Q12096 491 aa5.4□□□□□ -1.54
NYV1YLR093C PNS1Q12412 539 aa5.4□□□□□ -1.54
NYV1YLR093C BAS1P22035 811 aa5.39□□□□□ -1.55
NYV1YLR093C LST4P34239 828 aa5.39□□□□□ -1.55
NYV1YLR093C POL32P47110 350 aa5.39□□□□□ -1.55
NYV1YLR093C MSC2Q03455 724 aa5.39□□□□□ -1.55
NYV1YLR093C URN1Q06525 465 aaKnown RBP5.39□□□□□ -1.55
NYV1YLR093C PUS9Q12069 462 aa5.39□□□□□ -1.55
NYV1YLR093C ACE2P21192 770 aa5.38□□□□□ -1.55
NYV1YLR093C APL1P27351 700 aa5.38□□□□□ -1.55
NYV1YLR093C RRT14P40470 206 aa5.38□□□□□ -1.55
NYV1YLR093C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
NYV1YLR093C ESF1Q06344 628 aaKnown RBP5.38□□□□□ -1.55
NYV1YLR093C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
NYV1YLR093C HCM1P25364 564 aa5.37□□□□□ -1.55
NYV1YLR093C MCM2P29469 868 aa5.37□□□□□ -1.55
NYV1YLR093C RER2P35196 286 aa5.37□□□□□ -1.55
NYV1YLR093C TIF35Q04067 274 aaKnown RBP5.37□□□□□ -1.55
NYV1YLR093C TMA10Q06177 86 aa5.37□□□□□ -1.55
NYV1YLR093C RRP15Q06511 250 aaPredicted RBP5.37□□□□□ -1.55
NYV1YLR093C RTT10Q08924 1013 aa5.37□□□□□ -1.55
NYV1YLR093C ACM1Q08981 209 aa5.37□□□□□ -1.55
NYV1YLR093C HMI1Q12039 706 aa5.37□□□□□ -1.55
NYV1YLR093C ATE1P16639 503 aa5.36□□□□□ -1.55
NYV1YLR093C RAD27P26793 382 aa5.36□□□□□ -1.55
NYV1YLR093C FYV10P40492 516 aa5.36□□□□□ -1.55
NYV1YLR093C THS1P04801 734 aaKnown RBP5.35□□□□□ -1.55
NYV1YLR093C RPL11AP0C0W9 174 aaKnown RBP5.35□□□□□ -1.55
NYV1YLR093C PMI40P29952 429 aaKnown RBP5.35□□□□□ -1.55
NYV1YLR093C UGA2P38067 497 aa5.35□□□□□ -1.55
NYV1YLR093C GEM1P39722 662 aa5.35□□□□□ -1.55
NYV1YLR093C MSE1P48525 536 aa5.35□□□□□ -1.55
NYV1YLR093C MCM6P53091 1017 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms