RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSR3	YKR053C	SMD2	Q06217	110 aa	Known RBP	11.49	□□□□□ -0.57
YSR3	YKR053C	LDB19	Q12502	818 aa		11.49	□□□□□ -0.57
YSR3	YKR053C	MAS2	P11914	482 aa		11.48	□□□□□ -0.57
YSR3	YKR053C	TVP38	P36164	337 aa		11.48	□□□□□ -0.57
YSR3	YKR053C	MSC2	Q03455	724 aa		11.48	□□□□□ -0.57
YSR3	YKR053C	YLL058W	Q12198	575 aa		11.48	□□□□□ -0.57
YSR3	YKR053C	MIP1	P15801	1254 aa		11.47	□□□□□ -0.57
YSR3	YKR053C	CSM3	Q04659	317 aa		11.47	□□□□□ -0.57
YSR3	YKR053C	PHM6	Q05637	104 aa		11.47	□□□□□ -0.57
YSR3	YKR053C	PGK1	P00560	416 aa	Known RBP	11.46	□□□□□ -0.57
YSR3	YKR053C	AVT3	P36062	692 aa		11.46	□□□□□ -0.57
YSR3	YKR053C	CIT3	P43635	486 aa		11.46	□□□□□ -0.57
YSR3	YKR053C	YGR273C	P53329	174 aa		11.46	□□□□□ -0.57
YSR3	YKR053C	DSE4	P53753	1117 aa		11.46	□□□□□ -0.57
YSR3	YKR053C	CNM67	P53865	581 aa	Known RBP	11.46	□□□□□ -0.57
YSR3	YKR053C	AIM33	Q04516	312 aa		11.46	□□□□□ -0.57
YSR3	YKR053C	YDR524C-B	Q3E6R4	66 aa		11.46	□□□□□ -0.57
YSR3	YKR053C	CDC6	P09119	513 aa		11.45	□□□□□ -0.58
YSR3	YKR053C	AFT1	P22149	690 aa		11.45	□□□□□ -0.58
YSR3	YKR053C	KIN82	P25341	720 aa		11.45	□□□□□ -0.58
YSR3	YKR053C	UBP11	P36026	717 aa		11.45	□□□□□ -0.58
YSR3	YKR053C	CTF18	P49956	741 aa		11.45	□□□□□ -0.58
YSR3	YKR053C	MDR1	P53258	950 aa		11.45	□□□□□ -0.58
YSR3	YKR053C	MFM1	Q02783	413 aa		11.45	□□□□□ -0.58
YSR3	YKR053C	ATG11	Q12527	1178 aa		11.45	□□□□□ -0.58
YSR3	YKR053C	RPL19A	P0CX82	189 aa	Known RBP	11.44	□□□□□ -0.58
YSR3	YKR053C	RPL19B	P0CX83	189 aa	Predicted RBP	11.44	□□□□□ -0.58
YSR3	YKR053C	THR4	P16120	514 aa	Known RBP	11.44	□□□□□ -0.58
YSR3	YKR053C	VPS1	P21576	704 aa	Known RBP	11.44	□□□□□ -0.58
YSR3	YKR053C	ESS1	P22696	170 aa		11.44	□□□□□ -0.58
YSR3	YKR053C	RME1	P32338	300 aa	Known RBP	11.44	□□□□□ -0.58
YSR3	YKR053C	DUR3	P33413	735 aa		11.44	□□□□□ -0.58
YSR3	YKR053C	GRS1	P38088	690 aa	Known RBP	11.44	□□□□□ -0.58
YSR3	YKR053C	GAA1	P39012	614 aa		11.44	□□□□□ -0.58
YSR3	YKR053C	ZPR1	P53303	486 aa	Known RBP	11.44	□□□□□ -0.58
YSR3	YKR053C	VPS72	Q03388	795 aa		11.44	□□□□□ -0.58
YSR3	YKR053C	CRD1	Q07560	283 aa		11.44	□□□□□ -0.58
YSR3	YKR053C	PGM1	P33401	570 aa	Known RBP	11.43	□□□□□ -0.58
YSR3	YKR053C	TTI1	P36097	1038 aa		11.43	□□□□□ -0.58
YSR3	YKR053C	MSC7	P38694	644 aa		11.43	□□□□□ -0.58
YSR3	YKR053C	YEL025C	P39991	1188 aa		11.43	□□□□□ -0.58
YSR3	YKR053C	GPD2	P41911	440 aa	Known RBP	11.43	□□□□□ -0.58
YSR3	YKR053C	ELG1	Q12050	791 aa		11.43	□□□□□ -0.58
YSR3	YKR053C	GET3	Q12154	354 aa	Known RBP	11.43	□□□□□ -0.58
YSR3	YKR053C	TIP41	Q12199	356 aa		11.43	□□□□□ -0.58
YSR3	YKR053C	ILV1	P00927	576 aa	Known RBP	11.42	□□□□□ -0.58
YSR3	YKR053C	HSP82	P02829	709 aa	Known RBP	11.42	□□□□□ -0.58
YSR3	YKR053C	POT1	P27796	417 aa	Known RBP RIP-Chip data	11.42	□□□□□ -0.58	not detected
YSR3	YKR053C	AZR1	P50080	613 aa		11.42	□□□□□ -0.58
YSR3	YKR053C	SLK19	Q08581	821 aa	Known RBP	11.42	□□□□□ -0.58
YSR3	YKR053C	SUV3	P32580	737 aa		11.41	□□□□□ -0.58
YSR3	YKR053C	ORC6	P38826	435 aa		11.41	□□□□□ -0.58
YSR3	YKR053C	STT3	P39007	718 aa	Known RBP	11.41	□□□□□ -0.58
YSR3	YKR053C	ALD5	P40047	520 aa	Known RBP	11.41	□□□□□ -0.58
YSR3	YKR053C	FAR11	P53917	953 aa		11.41	□□□□□ -0.58
YSR3	YKR053C	TRS120	Q04183	1289 aa		11.41	□□□□□ -0.58
YSR3	YKR053C	SVF1	Q05515	481 aa		11.41	□□□□□ -0.58
YSR3	YKR053C	GPI13	Q07830	1017 aa		11.41	□□□□□ -0.58
YSR3	YKR053C	DCS2	Q12123	353 aa		11.41	□□□□□ -0.58
YSR3	YKR053C	GSY1	P23337	708 aa		11.4	□□□□□ -0.58
YSR3	YKR053C	YKR023W	P36119	530 aa	Known RBP	11.4	□□□□□ -0.58
YSR3	YKR053C	ENT3	P47160	408 aa		11.4	□□□□□ -0.58
YSR3	YKR053C	YPL150W	Q12152	901 aa		11.4	□□□□□ -0.58
YSR3	YKR053C	BRL1	P38770	471 aa		11.39	□□□□□ -0.59
YSR3	YKR053C	ATG32	P40458	529 aa		11.39	□□□□□ -0.59
YSR3	YKR053C	YIR014W	P40570	242 aa		11.39	□□□□□ -0.59
YSR3	YKR053C	PSP2	P50109	593 aa	Known RBP	11.39	□□□□□ -0.59
YSR3	YKR053C	FOL2	P51601	243 aa	Known RBP	11.39	□□□□□ -0.59
YSR3	YKR053C	YVH1	Q02256	364 aa	Known RBP	11.39	□□□□□ -0.59
YSR3	YKR053C	CUS1	Q02554	436 aa	Predicted RBP	11.39	□□□□□ -0.59
YSR3	YKR053C	NBL1	Q3E7Y6	73 aa		11.39	□□□□□ -0.59
YSR3	YKR053C	RFC5	P38251	354 aa		11.38	□□□□□ -0.59
YSR3	YKR053C	SGM1	P47166	707 aa		11.38	□□□□□ -0.59
YSR3	YKR053C	AHC1	Q12433	566 aa		11.38	□□□□□ -0.59
YSR3	YKR053C	RLF2	Q12495	606 aa		11.38	□□□□□ -0.59
YSR3	YKR053C	CPA2	P03965	1118 aa	Known RBP	11.37	□□□□□ -0.59
YSR3	YKR053C	PGI1	P12709	554 aa	Known RBP	11.37	□□□□□ -0.59
YSR3	YKR053C	ALG1	P16661	449 aa		11.37	□□□□□ -0.59
YSR3	YKR053C	UBC1	P21734	215 aa	Known RBP	11.37	□□□□□ -0.59
YSR3	YKR053C	SMY2	P32909	740 aa	Known RBP	11.37	□□□□□ -0.59
YSR3	YKR053C	POA1	P38218	177 aa		11.37	□□□□□ -0.59
YSR3	YKR053C	FIS1	P40515	155 aa		11.37	□□□□□ -0.59
YSR3	YKR053C	BRE2	P43132	505 aa		11.37	□□□□□ -0.59
YSR3	YKR053C	VPS20	Q04272	221 aa		11.37	□□□□□ -0.59
YSR3	YKR053C	YOR296W	Q08748	1289 aa		11.37	□□□□□ -0.59
YSR3	YKR053C	MYO1	P08964	1928 aa		11.37	□□□□□ -0.59
YSR3	YKR053C	HIP1	P06775	603 aa		11.36	□□□□□ -0.59
YSR3	YKR053C	SUP45	P12385	437 aa	Known RBP	11.36	□□□□□ -0.59
YSR3	YKR053C	CLN3	P13365	580 aa		11.36	□□□□□ -0.59
YSR3	YKR053C	PRP22	P24384	1145 aa	Known RBP	11.36	□□□□□ -0.59
YSR3	YKR053C	ROG3	P43602	733 aa		11.36	□□□□□ -0.59
YSR3	YKR053C	YGR153W	P48238	217 aa		11.36	□□□□□ -0.59
YSR3	YKR053C	DIP5	P53388	608 aa		11.36	□□□□□ -0.59
YSR3	YKR053C	RTC4	P53850	401 aa		11.36	□□□□□ -0.59
YSR3	YKR053C	FUS2	Q05670	677 aa		11.36	□□□□□ -0.59
YSR3	YKR053C	VPS13	Q07878	3144 aa		11.35	□□□□□ -0.59
YSR3	YKR053C	CDC48	P25694	835 aa	Known RBP	11.35	□□□□□ -0.59
YSR3	YKR053C	MSS51	P32335	436 aa		11.35	□□□□□ -0.59
YSR3	YKR053C	IRE1	P32361	1115 aa		11.35	□□□□□ -0.59
YSR3	YKR053C	GUA1	P38625	525 aa	Known RBP	11.35	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms