RNA–Protein interactions for RNA: YKR009C

FOX2, Transcript of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase, yeast

Gene FOX2, Length 2,703 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOX2	YKR009C	UBP11	P36026	717 aa		4.91	□□□□□ -1.62
FOX2	YKR009C	JHD1	P40034	492 aa		4.91	□□□□□ -1.62
FOX2	YKR009C	YGL138C	P53122	345 aa		4.91	□□□□□ -1.62
FOX2	YKR009C	HXT17	P53631	564 aa		4.91	□□□□□ -1.62
FOX2	YKR009C	ORC4	P54791	529 aa		4.91	□□□□□ -1.62
FOX2	YKR009C	ARP6	Q12509	438 aa		4.91	□□□□□ -1.62
FOX2	YKR009C	POL3	P15436	1097 aa		4.9	□□□□□ -1.62
FOX2	YKR009C	FBP26	P32604	452 aa		4.9	□□□□□ -1.62
FOX2	YKR009C	TVP23	P38962	199 aa		4.9	□□□□□ -1.62
FOX2	YKR009C	RPS7B	P48164	190 aa	Known RBP	4.9	□□□□□ -1.62
FOX2	YKR009C	YDR341C	Q05506	607 aa	Known RBP	4.9	□□□□□ -1.62
FOX2	YKR009C	PHM6	Q05637	104 aa		4.9	□□□□□ -1.62
FOX2	YKR009C	MET6	P05694	767 aa	Known RBP	4.9	□□□□□ -1.63
FOX2	YKR009C	MAK11	P20484	414 aa	Known RBP	4.9	□□□□□ -1.63
FOX2	YKR009C	PWP2	P25635	923 aa	Known RBP	4.9	□□□□□ -1.63
FOX2	YKR009C	SUL1	P38359	859 aa		4.9	□□□□□ -1.63
FOX2	YKR009C	GUA1	P38625	525 aa	Known RBP	4.9	□□□□□ -1.63
FOX2	YKR009C	AKR1	P39010	764 aa		4.9	□□□□□ -1.63
FOX2	YKR009C	HXT13	P39924	564 aa		4.9	□□□□□ -1.63
FOX2	YKR009C	YEL025C	P39991	1188 aa		4.9	□□□□□ -1.63
FOX2	YKR009C	ALD5	P40047	520 aa	Known RBP	4.9	□□□□□ -1.63
FOX2	YKR009C	YDR461C-A	Q2V2P7	80 aa		4.9	□□□□□ -1.63
FOX2	YKR009C	CIT1	P00890	479 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	MATALPHA2	P0CY08	210 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	HMLALPHA2	P0CY09	210 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	FUB1	P25659	250 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	RXT2	P38255	430 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	ATG32	P40458	529 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	RET3	P53600	189 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	YMR084W	A2P2R3	262 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	PGK1	P00560	416 aa	Known RBP	4.89	□□□□□ -1.63
FOX2	YKR009C	SWI6	P09959	803 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	ASF1	P32447	279 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	STB5	P38699	743 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	GPD2	P41911	440 aa	Known RBP	4.89	□□□□□ -1.63
FOX2	YKR009C	UBP15	P50101	1230 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	MDR1	P53258	950 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	VPS72	Q03388	795 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	SKY1	Q03656	742 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	YLR422W	Q06409	1932 aa		4.89	□□□□□ -1.63
FOX2	YKR009C	TRL1	P09880	827 aa	Known RBP	4.88	□□□□□ -1.63
FOX2	YKR009C	CBP3	P21560	335 aa		4.88	□□□□□ -1.63
FOX2	YKR009C	UBC1	P21734	215 aa	Known RBP	4.88	□□□□□ -1.63
FOX2	YKR009C	SWI4	P25302	1093 aa	Known RBP	4.88	□□□□□ -1.63
FOX2	YKR009C	IRE1	P32361	1115 aa		4.88	□□□□□ -1.63
FOX2	YKR009C	YHR131C	P38835	850 aa		4.88	□□□□□ -1.63
FOX2	YKR009C	PCI8	P40512	444 aa		4.88	□□□□□ -1.63
FOX2	YKR009C	SPO74	P45819	413 aa		4.88	□□□□□ -1.63
FOX2	YKR009C	SGM1	P47166	707 aa		4.88	□□□□□ -1.63
FOX2	YKR009C	UBP10	P53874	792 aa	Predicted RBP	4.88	□□□□□ -1.63
FOX2	YKR009C	YLR407W	Q06070	228 aa		4.88	□□□□□ -1.63
FOX2	YKR009C	YLL058W	Q12198	575 aa		4.88	□□□□□ -1.63
FOX2	YKR009C	RKM4	Q12504	494 aa		4.88	□□□□□ -1.63
FOX2	YKR009C	TIF1	P10081	395 aa	Known RBP	4.88	□□□□□ -1.63
FOX2	YKR009C	MCM6	P53091	1017 aa	Known RBP	4.88	□□□□□ -1.63
FOX2	YKR009C	CNM67	P53865	581 aa	Known RBP	4.88	□□□□□ -1.63
FOX2	YKR009C	MGA2	P40578	1113 aa		4.88	□□□□□ -1.63
FOX2	YKR009C	ESS1	P22696	170 aa		4.87	□□□□□ -1.63
FOX2	YKR009C	MSS51	P32335	436 aa		4.87	□□□□□ -1.63
FOX2	YKR009C	YAP1801	P38856	637 aa		4.87	□□□□□ -1.63
FOX2	YKR009C	CEX1	Q12453	761 aa		4.87	□□□□□ -1.63
FOX2	YKR009C	AIM44	Q99299	758 aa		4.87	□□□□□ -1.63
FOX2	YKR009C	SES1	P07284	462 aa	Known RBP	4.87	□□□□□ -1.63
FOX2	YKR009C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
FOX2	YKR009C	EFT1	P32324	842 aa	Known RBP	4.87	□□□□□ -1.63
FOX2	YKR009C	SUV3	P32580	737 aa		4.87	□□□□□ -1.63
FOX2	YKR009C	ISW1	P38144	1129 aa		4.87	□□□□□ -1.63
FOX2	YKR009C	ZPR1	P53303	486 aa	Known RBP	4.87	□□□□□ -1.63
FOX2	YKR009C	YNR014W	P53719	212 aa		4.87	□□□□□ -1.63
FOX2	YKR009C	NAF1	P53919	492 aa	Known RBP	4.87	□□□□□ -1.63
FOX2	YKR009C	YNL115C	P53925	644 aa		4.87	□□□□□ -1.63
FOX2	YKR009C	MFM1	Q02783	413 aa		4.87	□□□□□ -1.63
FOX2	YKR009C	PRP22	P24384	1145 aa	Known RBP	4.86	□□□□□ -1.63
FOX2	YKR009C	CAD1	P24813	409 aa	Known RBP	4.86	□□□□□ -1.63
FOX2	YKR009C	SMY2	P32909	740 aa	Known RBP	4.86	□□□□□ -1.63
FOX2	YKR009C	PGM1	P33401	570 aa	Known RBP	4.86	□□□□□ -1.63
FOX2	YKR009C	SLX1	P38324	304 aa		4.86	□□□□□ -1.63
FOX2	YKR009C	GAA1	P39012	614 aa		4.86	□□□□□ -1.63
FOX2	YKR009C	IDI1	P15496	288 aa		4.86	□□□□□ -1.63
FOX2	YKR009C	BUD2	P33314	1104 aa		4.86	□□□□□ -1.63
FOX2	YKR009C	FIS1	P40515	155 aa		4.86	□□□□□ -1.63
FOX2	YKR009C	HUL5	P53119	910 aa		4.86	□□□□□ -1.63
FOX2	YKR009C	YNL034W	P53963	612 aa		4.86	□□□□□ -1.63
FOX2	YKR009C	YNL018C	P53976	612 aa		4.86	□□□□□ -1.63
FOX2	YKR009C	FUS2	Q05670	677 aa		4.86	□□□□□ -1.63
FOX2	YKR009C	DAP1	Q12091	152 aa		4.86	□□□□□ -1.63
FOX2	YKR009C	MAP2	P38174	421 aa	Known RBP	4.85	□□□□□ -1.63
FOX2	YKR009C	OPT1	P40897	799 aa		4.85	□□□□□ -1.63
FOX2	YKR009C	BRE2	P43132	505 aa		4.85	□□□□□ -1.63
FOX2	YKR009C	ROG3	P43602	733 aa		4.85	□□□□□ -1.63
FOX2	YKR009C	PSP2	P50109	593 aa	Known RBP	4.85	□□□□□ -1.63
FOX2	YKR009C	YKE2	P52553	114 aa		4.85	□□□□□ -1.63
FOX2	YKR009C	ROD1	Q02805	837 aa		4.85	□□□□□ -1.63
FOX2	YKR009C	OXR1	Q08952	273 aa		4.85	□□□□□ -1.63
FOX2	YKR009C	BIO2	P32451	375 aa		4.85	□□□□□ -1.63
FOX2	YKR009C	SIS2	P36024	562 aa		4.85	□□□□□ -1.63
FOX2	YKR009C	YHL017W	P38745	532 aa		4.85	□□□□□ -1.63
FOX2	YKR009C	BNI5	P53890	448 aa	Known RBP	4.85	□□□□□ -1.63
FOX2	YKR009C	MSD1	P15179	658 aa	Known RBP	4.84	□□□□□ -1.63
FOX2	YKR009C	SAS3	P34218	831 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 90.3 ms